RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 SIAEQ9HAT2 523 aa9.32□□□□□ -0.92
NPIPB3-210ENST00000542817 EMC7Q9NPA0 242 aa9.32□□□□□ -0.92
NPIPB3-210ENST00000542817 B3GAT2Q9NPZ5 323 aa9.32□□□□□ -0.92
NPIPB3-210ENST00000542817 SLC17A5Q9NRA2 495 aa9.32□□□□□ -0.92
NPIPB3-210ENST00000542817 NPAP1Q9NZP6 1156 aa9.32□□□□□ -0.92
NPIPB3-210ENST00000542817 DNAJC27Q9NZQ0 273 aa9.32□□□□□ -0.92
NPIPB3-210ENST00000542817 SLC25A15Q9Y619 301 aa9.32□□□□□ -0.92
NPIPB3-210ENST00000542817 ITPR2Q14571 2701 aa9.32□□□□□ -0.92
NPIPB3-210ENST00000542817 ABCA12Q86UK0 2595 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 ARPC4-TTLL3A0A0A6YYG9 625 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 A0A1W2PR80 420 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 TVP23AA6NH52 213 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 OR5H1A6NKK0 313 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 J3QRE1 110 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 SIAH2O43255 324 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 PRODHO43272 600 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 KRT33AO76009 404 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 WNT11O96014 354 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 HLA-HP01893 362 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 CDC42P60953 191 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 TUBA1BP68363 451 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 HIST1H3AP68431 136 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 SORDQ00796 357 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 HSF2Q03933 536 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 IL18R1Q13478 541 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 HIST2H3PS2Q5TEC6 136 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 HIST2H3AQ71DI3 136 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 TUBA1AQ71U36 451 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 MEPCEQ7L2J0 689 aaKnown RBP9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 ABHD12BQ7Z5M8 362 aaPredicted RBP9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 SATL1Q86VE3 508 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 ZNF584Q8IVC4 421 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 LINC01560Q8TB33 94 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 CNIH3Q8TBE1 160 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 SMAP2Q8WU79 429 aaPredicted RBP9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 ZMYND19Q96E35 227 aaPredicted RBP9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 ANKRD60Q9BZ19 345 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 OR10A4Q9H209 315 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 PLGRKTQ9HBL7 147 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 RASSF1Q9NS23 344 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 HAO2Q9NYQ3 351 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 CYB5R1Q9UHQ9 305 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 KLF2Q9Y5W3 355 aaPredicted RBP9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 LHFPL6Q9Y693 200 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 VPS13CQ709C8 3753 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 FLNBO75369 2602 aaKnown RBP9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 SH3D21A4FU49 640 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 PRR32B1ATL7 298 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 SELENOFO60613 162 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 HRGP04196 525 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 CST2P09228 141 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 OR8G3PP0DMU2 310 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 NR2C1P13056 603 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 HOXB1P14653 301 aaPredicted RBP9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 NPR2P20594 1047 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 MSR1P21757 451 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 MYF6P23409 242 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 LOXP28300 417 aaPredicted RBP9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 HTR1FP30939 366 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 RPS27P42677 84 aaKnown RBP9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 SLC15A1P46059 708 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 ALDH3B2P48448 385 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 ZNF84P51523 738 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 TEKQ02763 1124 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 CDK5R2Q13319 367 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 GGTLC2Q14390 218 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 SGCAQ16586 387 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 RSPO1Q2MKA7 263 aaPredicted RBP9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 SLC35D3Q5M8T2 416 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 TIMM23BQ5SRD1 257 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 OR7E24Q6IFN5 339 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 DMRTC2Q8IXT2 367 aaPredicted RBP9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 C17orf78Q8N4C9 275 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 ZNF555Q8NEP9 628 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 PROKR2Q8NFJ6 384 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 STEAP2Q8NFT2 490 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 OR10S1Q8NGN2 331 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 MAP6Q96JE9 813 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 AMELYQ99218 206 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 RHNO1Q9BSD3 238 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 RERGLQ9H628 205 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 SEC61A2Q9H9S3 476 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 ADGRL4Q9HBW9 690 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 PNRC2Q9NPJ4 139 aaKnown RBP9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 UBAP1Q9NZ09 502 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 CRNNQ9UBG3 495 aaPredicted RBP9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 MOKQ9UQ07 419 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 KLHDC2Q9Y2U9 406 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 HSPE1-MOB4S4R3N1 261 aa9.31□□□□□ -0.92
NPIPB3-210ENST00000542817 BAHCC1Q9P281 2608 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 PLCE1Q9P212 2302 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 AKAP9Q99996 3911 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 A0A1W2PPL8 197 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 CIB4A0PJX0 185 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 TRIM64CA6NLI5 447 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 IGKV3-15P01624 115 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 IGLV1-44P01699 117 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 CELA3BP08861 270 aa9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 PAICSP22234 425 aaKnown RBP9.3□□□□□ -0.92
NPIPB3-210ENST00000542817 IL32P24001 234 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms