RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 ITGB2P05107 769 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 AKAIN1P0CW23 69 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 RPS27P42677 84 aaKnown RBP4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 POU3F4P49335 361 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 CCR4P51679 360 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 EFNA3P52797 238 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 H2BFSP57053 126 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 RPL27P61353 136 aaKnown RBP4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 SEC61A1P61619 476 aaKnown RBP4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 HLXQ14774 488 aaPredicted RBP4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 EBPQ15125 230 aaKnown RBP4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 TOMM34Q15785 309 aaPredicted RBP4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 RAB11BQ15907 218 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 ACKR1Q16570 336 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 MEP1BQ16820 701 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 C2orf68Q2NKX9 166 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 PCGF3Q3KNV8 242 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 C2orf76Q3KRA6 126 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 SMUG1Q53HV7 270 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 WDR45BQ5MNZ6 344 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 YOD1Q5VVQ6 348 aaPredicted RBP4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 C1QL3Q5VWW1 255 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 RGS7BPQ6MZT1 257 aaPredicted RBP4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 NHLRC1Q6VVB1 395 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 C3P1Q6ZMU1 363 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 MAMDC2Q7Z304 686 aaPredicted RBP4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 KANSL1Q7Z3B3 1105 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 CATSPERDQ86XM0 798 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 LYPD6Q86Y78 171 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 NAXDQ8IW45 347 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 TMEM151BQ8IW70 566 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 CDH26Q8IXH8 852 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 METTL27Q8N6F8 245 aaPredicted RBP4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 ZNF441Q8N8Z8 693 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 OR2AK2Q8NG84 335 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 OR51D1Q8NGF3 324 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 OR4D10Q8NGI6 311 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 OR52B4Q8NGK2 314 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 ZNF563Q8TA94 476 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 ATOH1Q92858 354 aaPredicted RBP4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 RBPMSQ93062 196 aaKnown RBP4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 FAM3DQ96BQ1 224 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 MVB12AQ96EY5 273 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 KLHDC7BQ96G42 594 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 ADOQ96SZ5 270 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 ELF4Q99607 663 aaPredicted RBP4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 GINS4Q9BRT9 223 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 NUDT9Q9BW91 350 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 ULBP3Q9BZM4 244 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 TXNIPQ9H3M7 391 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 ELOVL3Q9HB03 270 aa4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 MRPL22Q9NWU5 206 aaKnown RBP4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 ZNF107Q9UII5 783 aaPredicted RBP4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 PPIEQ9UNP9 301 aaKnown RBP4.67□□□□□ -1.66
ATPAF1-212ENST00000542495 BRWD1Q9NSI6 2320 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 TRAV18A0A075B6X5 111 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 A0A0A6YYH2 397 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 TMEM272A0A1B0GTI8 110 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 LOC390937A0A1W2PQ73 354 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 TCRBV16S1A1N1A0A5B0 115 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 SLC22A23A1A5C7 686 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 UBE2QL1A1L167 161 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 A6NJ64 397 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 ADARB2-AS1A8MUL3 147 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 TMEM150CB9EJG8 249 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 KDM4BO94953 1096 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 HRGP04196 525 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 ISG15P05161 165 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 NMBP08949 121 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 ACSM4P0C7M7 580 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 GABRA1P14867 456 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 GLULP15104 373 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 CXCR1P25024 350 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 S100A11P31949 105 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 PRSS3P35030 304 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 PTGS2P35354 604 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 LTBRP36941 435 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 GFERP55789 205 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 SRSF4Q08170 494 aaKnown RBP4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 ELAVL1Q15717 326 aaKnown RBP4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 PCK2Q16822 640 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 TMEM225Q6GV28 225 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 OR7E24Q6IFN5 339 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 SLC18B1Q6NT16 456 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 OGFOD3Q6PK18 319 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 TMUB2Q71RG4 321 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 C9orf40Q8IXQ3 194 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 MUC20Q8N307 709 aaPredicted RBP4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 SPERTQ8NA61 448 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 TMEM229BQ8NBD8 167 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 OR51S1Q8NGJ8 323 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 OR5M1Q8NGP8 315 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 OR1J4Q8NGS1 313 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 OR6S1Q8NH40 331 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 OR8K3Q8NH51 312 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 SCARB1Q8WTV0 552 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 PCNPQ8WW12 178 aaKnown RBP4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 ASB5Q8WWX0 329 aa4.66□□□□□ -1.66
ATPAF1-212ENST00000542495 EDAQ92838 391 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms