RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 FBXO17Q96EF6 278 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 INTS14Q96SY0 518 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 TEAD3Q99594 435 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 TTTY10Q9BZA0 68 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 KCNN2Q9H2S1 579 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 AMBNQ9NP70 447 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 CCNB1IP1Q9NPC3 277 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 RAB26Q9ULW5 256 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 MOKQ9UQ07 419 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 AMDHD2Q9Y303 409 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 SLC25A15Q9Y619 301 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 LHFPL6Q9Y693 200 aa11.98□□□□□ -0.49
CD44-224ENST00000526669 SLC22A31A6NKX4 558 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 MPZL2O60487 215 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 CELA3BP08861 270 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 CST2P09228 141 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 MYF6P23409 242 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 ENTPD1P49961 510 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 ZNF83P51522 516 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 HCCSP53701 268 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 SORDQ00796 357 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 CDK5R2Q13319 367 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 FAM27BQ5VT28 67 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 TMEM53Q6P2H8 277 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 TMEM154Q6P9G4 183 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 MYPOPQ86VE0 399 aaPredicted RBP11.97□□□□□ -0.49
CD44-224ENST00000526669 C17orf78Q8N4C9 275 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 OR51G2Q8NGK0 314 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 AKR7LQ8NHP1 331 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 NANOS1Q8WY41 292 aaKnown RBP11.97□□□□□ -0.49
CD44-224ENST00000526669 MUCL1Q96DR8 90 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 NPAP1Q9NZP6 1156 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 ASH2LQ9UBL3 628 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 PCDHGB5Q9Y5G0 923 aa11.97□□□□□ -0.49
CD44-224ENST00000526669 KLF2Q9Y5W3 355 aaPredicted RBP11.97□□□□□ -0.49
CD44-224ENST00000526669 ARPC4-TTLL3A0A0A6YYG9 625 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 TUBAL3A6NHL2 446 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 ZNF593O00488 134 aaPredicted RBP11.96□□□□□ -0.49
CD44-224ENST00000526669 UBL3O95164 117 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 WNT11O96014 354 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 MMP7P09237 267 aaPredicted RBP11.96□□□□□ -0.49
CD44-224ENST00000526669 COL8A1P27658 744 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 HTR1FP30939 366 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 IDH3GP51553 393 aaPredicted RBP11.96□□□□□ -0.49
CD44-224ENST00000526669 LSM6P62312 80 aaKnown RBP11.96□□□□□ -0.49
CD44-224ENST00000526669 RAB1AP62820 205 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 ZNF91Q05481 1191 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 RAB39AQ14964 217 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 KCNMB1Q16558 191 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 SLC36A2Q495M3 483 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 MEDAGQ5VYS4 303 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 LAIR2Q6ISS4 152 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 SPATC1Q76KD6 591 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 DPY19L4Q7Z388 723 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 TIGD4Q8IY51 512 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 OR4F15Q8NGB8 312 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 HSD17B8Q92506 261 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 RNFT2Q96EX2 444 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 Q96MT0 163 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 CNN2Q99439 309 aaKnown RBP11.96□□□□□ -0.49
CD44-224ENST00000526669 TBX5Q99593 518 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 CDADC1Q9BWV3 514 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 ANKRD60Q9BZ19 345 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 OR10A4Q9H209 315 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 MARCH7Q9H992 704 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 B3GNT2Q9NY97 397 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 WARS2Q9UGM6 360 aaKnown RBP11.96□□□□□ -0.49
CD44-224ENST00000526669 NDRG3Q9UGV2 375 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 KCNG2Q9UJ96 466 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 HSPE1-MOB4S4R3N1 261 aa11.96□□□□□ -0.49
CD44-224ENST00000526669 AKAP6Q13023 2319 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 C12orf71A8MTZ7 269 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 M0R1B8 84 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 RER1O15258 196 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 DOK2O60496 412 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 FAM20BO75063 409 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 RAB36O95755 333 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 HRGP04196 525 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 DBTP11182 482 aaKnown RBP11.95□□□□□ -0.5
CD44-224ENST00000526669 HOXB1P14653 301 aaPredicted RBP11.95□□□□□ -0.5
CD44-224ENST00000526669 PPP3CBP16298 524 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 KIR2DL3P43628 341 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 BLVRAP53004 296 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 PSG4Q00888 419 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 AQP6Q13520 282 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 EIF2B1Q14232 305 aaKnown RBP11.95□□□□□ -0.5
CD44-224ENST00000526669 GGTLC2Q14390 218 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 GSG1Q2KHT4 349 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 NRN1LQ496H8 165 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 PABPC1L2AQ5JQF8 200 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 SLC25A30Q5SVS4 291 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 SLC18B1Q6NT16 456 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 ZNF774Q6NX45 483 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 SEZ6L2Q6UXD5 910 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 CFAP77Q6ZQR2 320 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 P2RY8Q86VZ1 359 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 SLC35F2Q8IXU6 374 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 OR2AJ1Q8NGZ0 328 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 RFKQ969G6 155 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 MS4A3Q96HJ5 214 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms