RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ANKRD16Q6P6B7 361 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 BHLHA15Q7RTS1 189 aaPredicted RBP16.97■□□□□ 0.31
USP39-218ENST00000493829 SSX6Q7RTT6 188 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 SLC16A14Q7RTX9 510 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 CDC20BQ86Y33 519 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 FGFBP3Q8TAT2 258 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 CA5BP1Q8WTZ4 195 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 MYDGFQ969H8 173 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 FBXO17Q96EF6 278 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 TMEM80Q96HE8 168 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 NR1H4Q96RI1 486 aaPredicted RBP16.97■□□□□ 0.31
USP39-218ENST00000493829 LAMP5Q9UJQ1 280 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 SLC5A6Q9Y289 635 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 A0A1W2PQL4 384 aaPredicted RBP16.97■□□□□ 0.31
USP39-218ENST00000493829 ZNF503-AS2A6NEH8 195 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 PSMD9O00233 223 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 RGS10O43665 173 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 HLA-HP01893 362 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 MT-ND2P03891 347 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 CDK1P06493 297 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 HTR1AP08908 422 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 IL32P24001 234 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 GABARAPL2P60520 117 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 TGFBR3Q03167 851 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 FAM27E3Q08E93 113 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 P2RY6Q15077 328 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 KCNMB1Q16558 191 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 KCTD21Q4G0X4 260 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 SFRP5Q5T4F7 317 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 STAC2Q6ZMT1 411 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 CFAP77Q6ZQR2 320 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 DCXRQ7Z4W1 244 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 THEM6Q8WUY1 208 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 IPCEF1Q8WWN9 437 aaPredicted RBP16.97■□□□□ 0.31
USP39-218ENST00000493829 ASB5Q8WWX0 329 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 BCL2L2Q92843 193 aaPredicted RBP16.97■□□□□ 0.31
USP39-218ENST00000493829 AMELYQ99218 206 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 DUSP21Q9H596 190 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 MRPS18AQ9NVS2 196 aaKnown RBP16.97■□□□□ 0.31
USP39-218ENST00000493829 JKAMPQ9P055 326 aa16.97■□□□□ 0.31
USP39-218ENST00000493829 NCOA6Q14686 2063 aaPredicted RBP16.96■□□□□ 0.31
USP39-218ENST00000493829 DAPL1A0PJW8 107 aa16.96■□□□□ 0.31
USP39-218ENST00000493829 IRGMA1A4Y4 181 aa16.96■□□□□ 0.31
USP39-218ENST00000493829 MAGEB4O15481 346 aaPredicted RBP16.96■□□□□ 0.31
USP39-218ENST00000493829 LYNP07948 512 aa16.96■□□□□ 0.31
USP39-218ENST00000493829 CD79AP11912 226 aa16.96■□□□□ 0.31
USP39-218ENST00000493829 GABRA6Q16445 453 aa16.96■□□□□ 0.31
USP39-218ENST00000493829 FAM27BQ5VT28 67 aa16.96■□□□□ 0.31
USP39-218ENST00000493829 SLC18B1Q6NT16 456 aa16.96■□□□□ 0.31
USP39-218ENST00000493829 LHFPL3Q86UP9 236 aa16.96■□□□□ 0.31
USP39-218ENST00000493829 OR2AJ1Q8NGZ0 328 aa16.96■□□□□ 0.31
USP39-218ENST00000493829 OTOSQ8NHW6 89 aa16.96■□□□□ 0.31
USP39-218ENST00000493829 YIPF3Q9GZM5 350 aa16.96■□□□□ 0.31
USP39-218ENST00000493829 FGF20Q9NP95 211 aaPredicted RBP16.96■□□□□ 0.31
USP39-218ENST00000493829 CCNB1IP1Q9NPC3 277 aa16.96■□□□□ 0.31
USP39-218ENST00000493829 GDF2Q9UK05 429 aaPredicted RBP16.96■□□□□ 0.31
USP39-218ENST00000493829 DIMT1Q9UNQ2 313 aaKnown RBP16.96■□□□□ 0.31
USP39-218ENST00000493829 PRR32B1ATL7 298 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 ZNF670-ZNF695F2Z2N8 137 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 J3QRE1 110 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 RER1O15258 196 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 CST2P09228 141 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 MYL12AP19105 171 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 HOXC12P31275 282 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 CD79BP40259 229 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 ETV1P50549 477 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 ASCL1P50553 236 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 LSM6P62312 80 aaKnown RBP16.95■□□□□ 0.3
USP39-218ENST00000493829 ACTC1P68032 377 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 ACTA1P68133 377 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 ZNF85Q03923 595 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 SLC25A35Q3KQZ1 300 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 ALKBH2Q6NS38 261 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 ACBD7Q8N6N7 88 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 OR52N5Q8NH56 324 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 S100PBPQ96BU1 408 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 YTHDF1Q9BYJ9 559 aaKnown RBP16.95■□□□□ 0.3
USP39-218ENST00000493829 RNF121Q9H920 327 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 NOX3Q9HBY0 568 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 ZNF224Q9NZL3 707 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 CLEC2DQ9UHP7 191 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 CYB5R1Q9UHQ9 305 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 PCNX1Q96RV3 2341 aa16.95■□□□□ 0.3
USP39-218ENST00000493829 IGHA1P01876 353 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 ZNF32P17041 273 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 CCKARP32238 428 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 AQP6Q13520 282 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 ZNF627Q7L945 461 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 MAP6Q96JE9 813 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 KCNN2Q9H2S1 579 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 ZNF696Q9H7X3 374 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 PCDHGB1Q9Y5G3 927 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 HIVEP3Q5T1R4 2406 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 TMCC2O75069 709 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 OR2T7P0C7T2 308 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 ATP6V1B1P15313 513 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 DCKP27707 260 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 MAP2K4P45985 399 aa16.94■□□□□ 0.3
USP39-218ENST00000493829 UBE2NP61088 152 aaKnown RBP16.94■□□□□ 0.3
USP39-218ENST00000493829 NRN1LQ496H8 165 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms