RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SLC7A7Q9UM01 511 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 OAZ3Q9UMX2 235 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 ANGPT4Q9Y264 503 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 NDUFAF1Q9Y375 327 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 IGKV1D-43A0A0B4J1Z2 117 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 A0A0G2JND7 137 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 A0A1W2PPW3 197 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 TRAPPC13A5PLN9 417 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 PRORSD1PA6NEY8 169 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 FBP2O00757 339 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 DHHO43323 396 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 CHP2O43745 196 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 TRMUO75648 421 aaKnown RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 UBL3O95164 117 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 VENTXO95231 258 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 BCL10O95999 233 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 MT-ATP6P00846 226 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 HIST1H2ABP04908 130 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 SERPINA5P05154 406 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 CD1AP06126 327 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 LCKP06239 509 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 ASAH2BP0C7U1 165 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 PGA4P0DJD7 388 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 PGA3P0DJD8 388 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 OR8G3PP0DMU2 310 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 HNF1AP20823 631 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 CCNOP22674 350 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 PPIBP23284 216 aaKnown RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 CDAP32320 146 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 AQP2P41181 271 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 GPR6P46095 362 aaPredicted RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 OR1E2P47887 323 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 EVX1P49640 407 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 GZMMP51124 257 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 CRYBA2P53672 197 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 CDH15P55291 814 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 CLRN1P58418 232 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 RAP2BP61225 183 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 CCL8P80075 99 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 GLO1Q04760 184 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 RPL18Q07020 188 aaKnown RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 ZP4Q12836 540 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 CNN3Q15417 329 aaKnown RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 TSTQ16762 297 aaKnown RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 SPRNQ5BIV9 151 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 RABL3Q5HYI8 236 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 RGS7BPQ6MZT1 257 aaPredicted RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 NANOGP8Q6NSW7 305 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 FAHD2BQ6P2I3 314 aaPredicted RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 DEF8Q6ZN54 512 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 HIST3H2AQ7L7L0 130 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF627Q7L945 461 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 PIWIL3Q7Z3Z3 882 aaKnown RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 DHDDSQ86SQ9 333 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 MEX3DQ86XN8 651 aaKnown RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 C1QL4Q86Z23 238 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 CLDN22Q8N7P3 220 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 C11orf65Q8NCR3 313 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 CPEB3Q8NE35 698 aaKnown RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 SLC30A7Q8NEW0 376 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 OR4K5Q8NGD3 323 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 OR6X1Q8NH79 312 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 MOSPD2Q8NHP6 518 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 PFN4Q8NHR9 129 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 SLC26A7Q8TE54 656 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 TMEM255BQ8WV15 326 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 NSMAFQ92636 917 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 RDH5Q92781 318 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 HIST1H2ACQ93077 130 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF566Q969W8 418 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 FAHD2AQ96GK7 314 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 SLC25A44Q96H78 314 aaPredicted RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 OR14A2Q96R54 314 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 PRSS27Q9BQR3 290 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 C1orf43Q9BWL3 253 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 KAT8Q9H7Z6 458 aaKnown RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 NANOGQ9H9S0 305 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 ZMAT3Q9HA38 289 aaKnown RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 MEPEQ9NQ76 525 aaPredicted RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 C20orf141Q9NUB4 165 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 INTS9Q9NV88 658 aaKnown RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 TMEM38BQ9NVV0 291 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 HIF1ANQ9NWT6 349 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 LEF1Q9UJU2 399 aaPredicted RBP4□□□□□ -1.77
GTF3C3-208ENST00000455546 CORO2BQ9UQ03 480 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 SH3GLB1Q9Y371 365 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 GMEB1Q9Y692 573 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 CACNG2Q9Y698 323 aa4□□□□□ -1.77
GTF3C3-208ENST00000455546 LOC100653049A0A140TA62 436 aa3.99□□□□□ -1.77
GTF3C3-208ENST00000455546 C17orf100A8MU93 164 aa3.99□□□□□ -1.77
GTF3C3-208ENST00000455546 B4DSR2 109 aa3.99□□□□□ -1.77
GTF3C3-208ENST00000455546 ANGPT2O15123 496 aa3.99□□□□□ -1.77
GTF3C3-208ENST00000455546 TCF21O43680 179 aa3.99□□□□□ -1.77
GTF3C3-208ENST00000455546 PIP5K1CO60331 668 aa3.99□□□□□ -1.77
GTF3C3-208ENST00000455546 FMO6PO60774 539 aa3.99□□□□□ -1.77
GTF3C3-208ENST00000455546 KRT34O76011 436 aa3.99□□□□□ -1.77
GTF3C3-208ENST00000455546 FARS2O95363 451 aaKnown RBP3.99□□□□□ -1.77
GTF3C3-208ENST00000455546 SLC2A10O95528 541 aa3.99□□□□□ -1.77
GTF3C3-208ENST00000455546 SAGP10523 405 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms