RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 HIST3H2AQ7L7L0 130 aa12.48□□□□□ -0.41
NELFE-204ENST00000436289 KRT73Q86Y46 540 aa12.48□□□□□ -0.41
NELFE-204ENST00000436289 C1orf87Q8N0U7 546 aa12.48□□□□□ -0.41
NELFE-204ENST00000436289 ITLN1Q8WWA0 313 aa12.48□□□□□ -0.41
NELFE-204ENST00000436289 SGCDQ92629 289 aa12.48□□□□□ -0.41
NELFE-204ENST00000436289 HIST1H2ACQ93077 130 aa12.48□□□□□ -0.41
NELFE-204ENST00000436289 PPP1R36Q96LQ0 422 aa12.48□□□□□ -0.41
NELFE-204ENST00000436289 COG8Q96MW5 612 aa12.48□□□□□ -0.41
NELFE-204ENST00000436289 ZNF607Q96SK3 696 aa12.48□□□□□ -0.41
NELFE-204ENST00000436289 SEPHS2Q99611 448 aa12.48□□□□□ -0.41
NELFE-204ENST00000436289 PCGF1Q9BSM1 259 aa12.48□□□□□ -0.41
NELFE-204ENST00000436289 MRPL13Q9BYD1 178 aaKnown RBP12.48□□□□□ -0.41
NELFE-204ENST00000436289 NUF2Q9BZD4 464 aa12.48□□□□□ -0.41
NELFE-204ENST00000436289 RAD21L1Q9H4I0 556 aa12.48□□□□□ -0.41
NELFE-204ENST00000436289 SMURF2Q9HAU4 748 aa12.48□□□□□ -0.41
NELFE-204ENST00000436289 NANSQ9NR45 359 aa12.48□□□□□ -0.41
NELFE-204ENST00000436289 TBCCD1Q9NVR7 557 aa12.48□□□□□ -0.41
NELFE-204ENST00000436289 TET2Q6N021 2002 aaPredicted RBP12.48□□□□□ -0.41
NELFE-204ENST00000436289 CENPVL3A0A0U1RRI6 287 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 ZNF816-ZNF321PA0A0X1KG74 233 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 BTBD17A6NE02 478 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 ZNF879B4DU55 563 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 TOX4O94842 621 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 BPGMP07738 259 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 ZNF32P17041 273 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 RPL14P50914 215 aaKnown RBP12.47□□□□□ -0.41
NELFE-204ENST00000436289 MMP16P51512 607 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 PCBD1P61457 104 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 PSG4Q00888 419 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 FADDQ13158 208 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 TAF11Q15544 211 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 FAM27BQ5VT28 67 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 RFPL4BQ6ZWI9 263 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 TCP10LQ8TDR4 215 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 C10orf82Q8WW14 230 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 TEX37Q96LM6 180 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 OR2V2Q96R30 315 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 TMEM246Q9BRR3 403 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 RMND5AQ9H871 391 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 SLCO1B3Q9NPD5 702 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 SLC17A7Q9P2U7 560 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 SLC13A4Q9UKG4 626 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 CAB39Q9Y376 341 aaPredicted RBP12.47□□□□□ -0.41
NELFE-204ENST00000436289 TIMM10BQ9Y5J6 103 aa12.47□□□□□ -0.41
NELFE-204ENST00000436289 PRORSD1PA6NEY8 169 aa12.46□□□□□ -0.41
NELFE-204ENST00000436289 SMIM23A6NLE4 172 aa12.46□□□□□ -0.41
NELFE-204ENST00000436289 LRRN3E7EW58 273 aa12.46□□□□□ -0.41
NELFE-204ENST00000436289 H0YL77 283 aa12.46□□□□□ -0.41
NELFE-204ENST00000436289 IGHV4-59P01825 116 aa12.46□□□□□ -0.41
NELFE-204ENST00000436289 SHBGP04278 402 aa12.46□□□□□ -0.41
NELFE-204ENST00000436289 FAM153BP0C7A2 387 aa12.46□□□□□ -0.41
NELFE-204ENST00000436289 BMP2P12643 396 aa12.46□□□□□ -0.41
NELFE-204ENST00000436289 EPHA3P29320 983 aa12.46□□□□□ -0.41
NELFE-204ENST00000436289 CFHR2P36980 270 aa12.46□□□□□ -0.41
NELFE-204ENST00000436289 GUCA1AP43080 201 aaPredicted RBP12.46□□□□□ -0.41
NELFE-204ENST00000436289 ZNF404Q494X3 552 aa12.46□□□□□ -0.41
NELFE-204ENST00000436289 WDR25Q64LD2 544 aaPredicted RBP12.46□□□□□ -0.41
NELFE-204ENST00000436289 LINC00114Q6XXX2 140 aa12.46□□□□□ -0.41
NELFE-204ENST00000436289 RANBP3LQ86VV4 465 aaPredicted RBP12.46□□□□□ -0.41
NELFE-204ENST00000436289 SPERTQ8NA61 448 aa12.46□□□□□ -0.41
NELFE-204ENST00000436289 WACQ9BTA9 647 aa12.46□□□□□ -0.41
NELFE-204ENST00000436289 FBLN5Q9UBX5 448 aa12.46□□□□□ -0.41
NELFE-204ENST00000436289 ZNF229Q9UJW7 825 aa12.46□□□□□ -0.41
NELFE-204ENST00000436289 NDRG4Q9ULP0 352 aaKnown RBP12.46□□□□□ -0.41
NELFE-204ENST00000436289 RAP2CQ9Y3L5 183 aa12.46□□□□□ -0.41
NELFE-204ENST00000436289 IGHV1-69DA0A0B4J2H0 117 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 A0A1W2PRG6 482 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 IGHV1-69P01742 117 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 IL12AP29459 219 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 SRP9P49458 86 aaKnown RBP12.45□□□□□ -0.42
NELFE-204ENST00000436289 CDH12P55289 794 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 NME5P56597 212 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 RGS8P57771 180 aaPredicted RBP12.45□□□□□ -0.42
NELFE-204ENST00000436289 EGR3Q06889 387 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 MELKQ14680 651 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 RGNQ15493 299 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 ZNF74Q16587 644 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 C11orf91Q3C1V1 193 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 HHATQ5VTY9 493 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 METTL11BQ5VVY1 283 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 ZNF613Q6PF04 617 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 Q6ZR03 302 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 DCDC5Q6ZRR9 648 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 MSANTD1Q6ZTZ1 278 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 NUDCD3Q8IVD9 361 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 ZNF781Q8N8C0 355 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 DTX3Q8N9I9 347 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 PNLDC1Q8NA58 520 aaKnown RBP12.45□□□□□ -0.42
NELFE-204ENST00000436289 AKR7LQ8NHP1 331 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 NPRL2Q8WTW4 380 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 PTP4A1Q93096 173 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 HAVCR1Q96D42 359 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 ITCHQ96J02 903 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 WWC2-AS2Q96NR7 200 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 ZNF347Q96SE7 839 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 OR2H1Q9GZK4 316 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 AIG1Q9NVV5 245 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 FAM96BQ9Y3D0 163 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 USH1CQ9Y6N9 552 aa12.45□□□□□ -0.42
NELFE-204ENST00000436289 MCIDASD6RGH6 385 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms