RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 HIST1H2BJP06899 126 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 CT45A8P0DMV1 189 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 CT45A9P0DMV2 189 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 OR12D1P0DN82 309 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 TMEM225BP0DP42 221 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 HIST1H2BOP23527 126 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 EDNRBP24530 442 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 LMO2P25791 158 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 TEAD1P28347 426 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 NTSP30990 170 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 SLC6A6P31641 620 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 APOBEC3AP31941 199 aaPredicted RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 HIST1H2BBP33778 126 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 TAGLN2P37802 199 aaKnown RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 OPRD1P41143 372 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 AQP2P41181 271 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 GABRA4P48169 554 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 FHITP49789 147 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 SLC16A1P53985 500 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 ATP1B3P54709 279 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 MANFP55145 182 aaKnown RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 CASP9P55211 416 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 BACE1P56817 501 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 HIST1H2BDP58876 126 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 RPS23P62266 143 aaKnown RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 RPS13P62277 151 aaKnown RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 HIST1H2BCP62807 126 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 TRA2BP62995 288 aaKnown RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 VAMP2P63027 116 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 FAM189BP81408 668 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 BEX3Q00994 111 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 SP3Q02447 781 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 HGFACQ04756 655 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 RASGEF1BQ0VAM2 473 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 GGTLC2Q14390 218 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 MELKQ14680 651 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 ATXN7L3Q14CW9 347 aaPredicted RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 HIST2H2BEQ16778 126 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 TMEM176BQ3YBM2 270 aaPredicted RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 Q499Y3 187 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 LRRC37A5PQ49AS3 106 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 HIKESHIQ53FT3 197 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 CT45A2Q5DJT8 189 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 COX20Q5RI15 118 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 MFSD14CQ5VZR4 134 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 FBXW9Q5XUX1 488 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 FAM71E1Q6IPT2 247 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 SLC25A24Q6NUK1 477 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 CFAP161Q6P656 301 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 ANKRD12Q6UB98 2062 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 LRRC69Q6ZNQ3 347 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 TIPARPQ7Z3E1 657 aaKnown RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 SZRD1Q7Z422 152 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 BCDIN3DQ7Z5W3 292 aaKnown RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 SERPINA9Q86WD7 417 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 COMMD2Q86X83 199 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 DND1Q8IYX4 353 aaKnown RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 KIR2DL5AQ8N109 375 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 MMP21Q8N119 569 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 ZNF433Q8N7K0 673 aaPredicted RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 CLEC1AQ8NC01 280 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 CLEC18CQ8NCF0 446 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 AGBL5Q8NDL9 886 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 CPEB3Q8NE35 698 aaKnown RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 SLC26A10Q8NG04 563 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 OR4K14Q8NGD5 310 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 OR8U1Q8NH10 309 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 OR51A7Q8NH64 312 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 OR14L1PQ8NHC6 308 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 SKA2Q8WVK7 121 aaPredicted RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 HIST1H2BHQ93079 126 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 TMEM106AQ96A25 262 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 TMEM159Q96B96 161 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 TIFAQ96CG3 184 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 MUCL1Q96DR8 90 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 MS4A6EQ96DS6 147 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 FBXO17Q96EF6 278 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 SLC41A2Q96JW4 573 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 FAM210BQ96KR6 192 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 SPATA33Q96N06 139 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 SMOQ99835 787 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 HIST1H2BNQ99877 126 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 HIST1H2BMQ99879 126 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 HIST1H2BLQ99880 126 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 NUDT16L1Q9BRJ7 211 aaKnown RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 ZNF649Q9BS31 505 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 CST11Q9H112 138 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 TCEAL2Q9H3H9 227 aaPredicted RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 EGLN3Q9H6Z9 239 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 ASB8Q9H765 288 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 ELP3Q9H9T3 547 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 KCNK12Q9HB15 430 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 SEPSECSQ9HD40 501 aaKnown RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 PDE7BQ9NP56 450 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 LHX9Q9NQ69 397 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 IL17CQ9P0M4 197 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 APOBEC3BQ9UH17 382 aaKnown RBP5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 ST6GALNAC2Q9UJ37 374 aa5.1□□□□□ -1.59
VTI1BP4-201ENST00000427516 CYP8B1Q9UNU6 501 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms