RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	SAMD8	Q96LT4	415 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	WDFY2	Q96P53	400 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	OR2V2	Q96R30	315 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	FUT8	Q9BYC5	575 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	POLE3	Q9NRF9	147 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ZNRD1	Q9P1U0	126 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	KLHL14	Q9P2G3	628 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	VPREB3	Q9UKI3	123 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	PPP1R3C	Q9UQK1	317 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	IGKV1D-43	A0A0B4J1Z2	117 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	LOC102725191	A0A1B0GVB3	256 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	C5orf49	A4QMS7	147 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ZNF726	A6NNF4	738 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	P2RY10	O00398	339 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	SNRPA	P09012	282 aa	Known RBP	7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	NQO1	P15559	274 aa	Known RBP	7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	HTR2A	P28223	471 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	GTF2E2	P29084	291 aa	Known RBP	7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ARRB2	P32121	409 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	CDA	P32320	146 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	CDKN2C	P42773	168 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ETV4	P43268	484 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	PPP1CB	P62140	327 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	KLRD1	Q13241	179 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	MOG	Q16653	247 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	MTX3	Q5HYI7	312 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	C6orf136	Q5SQH8	315 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ZFAND6	Q6FIF0	208 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	TMEM53	Q6P2H8	277 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ADAMTSL5	Q6ZMM2	481 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	LRRC74B	Q6ZQY2	392 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	SLC16A14	Q7RTX9	510 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	OR5AS1	Q8N127	324 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	SCCPDH	Q8NBX0	429 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	RBM15B	Q8NDT2	890 aa	Known RBP	7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	WFDC9	Q8NEX5	89 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	OR10AD1	Q8NGE0	317 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	OR52P1P	Q8NH57	321 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	RORB	Q92753	470 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	THOC1	Q96FV9	657 aa	Known RBP	7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	SLC41A3	Q96GZ6	507 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	WFDC6	Q9BQY6	131 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	DPY30	Q9C005	99 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	SMURF1	Q9HCE7	757 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	B3GAT2	Q9NPZ5	323 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	GLTP	Q9NZD2	209 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	CLN8	Q9UBY8	286 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	MARCO	Q9UEW3	520 aa	Predicted RBP	7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	TMED5	Q9Y3A6	229 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	GPR45	Q9Y5Y3	372 aa		7.06	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ANKRD61	A6NGH8	418 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	PLPP3	O14495	311 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	TIMM8A	O60220	97 aa	Predicted RBP	7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	NPHS1	O60500	1241 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	DBI	P07108	87 aa	Known RBP	7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	QDPR	P09417	244 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	MYL2	P10916	166 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ZNF32	P17041	273 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	STOM	P27105	288 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	APLNR	P35414	380 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	TGFBR2	P37173	567 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	BPIFB3	P59826	476 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	PSG4	Q00888	419 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ZNF404	Q494X3	552 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	FAM69A	Q5T7M9	428 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	TIFAB	Q6ZNK6	161 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	RNF144B	Q7Z419	303 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	MOGAT3	Q86VF5	341 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	SPATA4	Q8NEY3	305 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	OR4S1	Q8NGB4	309 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	OR8B3	Q8NGG8	313 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	MUC7	Q8TAX7	377 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	MZB1	Q8WU39	189 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	MAP6	Q96JE9	813 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	TRNT1	Q96Q11	434 aa	Known RBP	7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	OR8B2	Q96RD0	313 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ZNF347	Q96SE7	839 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	SLC35A5	Q9BS91	424 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	TRIM15	Q9C019	465 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	WNT5B	Q9H1J7	359 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	MTHFD2L	Q9H903	347 aa	Predicted RBP	7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	FN3KRP	Q9HA64	309 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ATAD3A	Q9NVI7	634 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	MIOX	Q9UGB7	285 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	FBXL3	Q9UKT7	428 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ZDHHC8	Q9ULC8	765 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	TMCC3	Q9ULS5	477 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ZNF443	Q9Y2A4	671 aa	Predicted RBP	7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	SAR1B	Q9Y6B6	198 aa		7.05	□□□□□ -1.28
NIF3L1-206	ENST00000416651	IQCM	A0A1B0GVH7	501 aa		7.04	□□□□□ -1.28
NIF3L1-206	ENST00000416651		A0A1B0GW55	424 aa		7.04	□□□□□ -1.28
NIF3L1-206	ENST00000416651		A0A1B0GWA3	101 aa		7.04	□□□□□ -1.28
NIF3L1-206	ENST00000416651	TMEM114	B3SHH9	223 aa		7.04	□□□□□ -1.28
NIF3L1-206	ENST00000416651	AKAP8	O43823	692 aa	Known RBP	7.04	□□□□□ -1.28
NIF3L1-206	ENST00000416651	CHST1	O43916	411 aa		7.04	□□□□□ -1.28
NIF3L1-206	ENST00000416651	CCDC159	P0C7I6	412 aa		7.04	□□□□□ -1.28
NIF3L1-206	ENST00000416651	DUX4L2	P0CJ85	424 aa		7.04	□□□□□ -1.28
NIF3L1-206	ENST00000416651	DUX4L3	P0CJ86	424 aa		7.04	□□□□□ -1.28
NIF3L1-206	ENST00000416651	DUX4L4	P0CJ87	422 aa		7.04	□□□□□ -1.28
NIF3L1-206	ENST00000416651	DUX4L5	P0CJ88	424 aa		7.04	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms