RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 SLC9A3P48764 834 aa14.09□□□□□ -0.15
PTPRK-208ENST00000392449 TAF11Q15544 211 aa14.09□□□□□ -0.15
PTPRK-208ENST00000392449 ZNF718Q3SXZ3 478 aa14.09□□□□□ -0.15
PTPRK-208ENST00000392449 ZNF730Q6ZMV8 503 aa14.09□□□□□ -0.15
PTPRK-208ENST00000392449 FOXL2NBQ6ZUU3 175 aa14.09□□□□□ -0.15
PTPRK-208ENST00000392449 TREML1Q86YW5 311 aa14.09□□□□□ -0.15
PTPRK-208ENST00000392449 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.09□□□□□ -0.15
PTPRK-208ENST00000392449 GEMIN6Q8WXD5 167 aaKnown RBP14.09□□□□□ -0.15
PTPRK-208ENST00000392449 DCAF16Q9NXF7 216 aa14.09□□□□□ -0.15
PTPRK-208ENST00000392449 EIF3KQ9UBQ5 218 aaKnown RBP14.09□□□□□ -0.15
PTPRK-208ENST00000392449 ARHGAP32A7KAX9 2087 aa14.09□□□□□ -0.15
PTPRK-208ENST00000392449 IMPA2O14732 288 aa14.08□□□□□ -0.16
PTPRK-208ENST00000392449 GSTA4O15217 222 aa14.08□□□□□ -0.16
PTPRK-208ENST00000392449 DEAF1O75398 565 aaPredicted RBP14.08□□□□□ -0.16
PTPRK-208ENST00000392449 CST2P09228 141 aa14.08□□□□□ -0.16
PTPRK-208ENST00000392449 GSK3BP49841 420 aa14.08□□□□□ -0.16
PTPRK-208ENST00000392449 PPP1CBP62140 327 aa14.08□□□□□ -0.16
PTPRK-208ENST00000392449 IFI44LQ53G44 452 aa14.08□□□□□ -0.16
PTPRK-208ENST00000392449 MESTQ5EB52 335 aa14.08□□□□□ -0.16
PTPRK-208ENST00000392449 FKBP9P1Q75LS8 142 aa14.08□□□□□ -0.16
PTPRK-208ENST00000392449 CBLL1Q75N03 491 aa14.08□□□□□ -0.16
PTPRK-208ENST00000392449 RP9Q8TA86 221 aaKnown RBP14.08□□□□□ -0.16
PTPRK-208ENST00000392449 ACOT11Q8WXI4 607 aaPredicted RBP14.08□□□□□ -0.16
PTPRK-208ENST00000392449 CCL17Q92583 94 aa14.08□□□□□ -0.16
PTPRK-208ENST00000392449 Q96M85 177 aa14.08□□□□□ -0.16
PTPRK-208ENST00000392449 MSL2Q9HCI7 577 aa14.08□□□□□ -0.16
PTPRK-208ENST00000392449 GRIP1Q9Y3R0 1128 aa14.08□□□□□ -0.16
PTPRK-208ENST00000392449 TANC2Q9HCD6 1990 aa14.08□□□□□ -0.16
PTPRK-208ENST00000392449 NBEAL1Q6ZS30 2694 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 LOC105371242A0A075B767 164 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 CLDN25C9JDP6 229 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 SLC22A2O15244 555 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 PLPP2O43688 288 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 MPZL1O95297 269 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 MT-ND5P03915 603 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 NR2C1P13056 603 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 MSR1P21757 451 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 PCMT1P22061 227 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 IFNA8P32881 189 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 RPL4P36578 427 aaKnown RBP14.07□□□□□ -0.16
PTPRK-208ENST00000392449 MBNL2Q5VZF2 373 aaKnown RBP14.07□□□□□ -0.16
PTPRK-208ENST00000392449 C8orf82Q6P1X6 216 aaPredicted RBP14.07□□□□□ -0.16
PTPRK-208ENST00000392449 SHQ1Q6PI26 577 aaKnown RBP14.07□□□□□ -0.16
PTPRK-208ENST00000392449 MBOAT2Q6ZWT7 520 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 ARPINQ7Z6K5 226 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 RASD2Q96D21 266 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 FAM46AQ96IP4 442 aaKnown RBP14.07□□□□□ -0.16
PTPRK-208ENST00000392449 CCDC134Q9H6E4 229 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 G6PC2Q9NQR9 355 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 POLE4Q9NR33 117 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 IL20RAQ9UHF4 553 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 TIMM10BQ9Y5J6 103 aa14.07□□□□□ -0.16
PTPRK-208ENST00000392449 GMNCA6NCL1 334 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 A6NIZ1 184 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 IGHV2-5P01817 119 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 NUDT2P50583 147 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 RAP1BP61224 184 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 RAP1AP62834 184 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 DBPQ10586 325 aaPredicted RBP14.06□□□□□ -0.16
PTPRK-208ENST00000392449 HFEQ30201 348 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 FAM205BPQ63HN1 556 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 SEMA6DQ8NFY4 1073 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 SLC7A6Q92536 515 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 C4orf45Q96LM5 186 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 NMNAT1Q9HAN9 279 aaPredicted RBP14.06□□□□□ -0.16
PTPRK-208ENST00000392449 TENM1Q9UKZ4 2725 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 WNK2Q9Y3S1 2297 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 TRAV20A0A0B4J274 112 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 TEX13CA0A0J9YWL9 993 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 PLSCR5A0PG75 271 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 UBOX5O94941 541 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 PNPP00491 289 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 CTLA4P16410 223 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 ADRA2CP18825 462 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 TEKQ02763 1124 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 MOGQ16653 247 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 ZBED5Q49AG3 693 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 ACSM5Q6NUN0 579 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 FAM122BQ7Z309 247 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 ALDH16A1Q8IZ83 802 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 FAM86B1Q8N7N1 296 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 SLC7A13Q8TCU3 470 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 FAM162AQ96A26 154 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 RERGLQ9H628 205 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 GRHPRQ9UBQ7 328 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 EGFL7Q9UHF1 273 aa14.06□□□□□ -0.16
PTPRK-208ENST00000392449 ISPDA4D126 451 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 HTR3EA5X5Y0 456 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 C12orf71A8MTZ7 269 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 DOK2O60496 412 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 ICMTO60725 284 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 DIRAS1O95057 198 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 ABHD16AO95870 558 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 CD14P08571 375 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 GUCA1AP43080 201 aaPredicted RBP14.05□□□□□ -0.16
PTPRK-208ENST00000392449 HTR5AP47898 357 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 ERFP50548 548 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 PCBD1P61457 104 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 PSG7Q13046 419 aa14.05□□□□□ -0.16
PTPRK-208ENST00000392449 FAM209AQ5JX71 171 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms