RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 C5orf34Q96MH7 638 aa16.2■□□□□ 0.18
CD40-201ENST00000372276 NECAB3Q96P71 396 aaPredicted RBP16.2■□□□□ 0.18
CD40-201ENST00000372276 OR10A4Q9H209 315 aa16.2■□□□□ 0.18
CD40-201ENST00000372276 KLRF1Q9NZS2 232 aa16.2■□□□□ 0.18
CD40-201ENST00000372276 GTF2A1LQ9UNN4 478 aa16.2■□□□□ 0.18
CD40-201ENST00000372276 SMLR1H3BR10 107 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 ARPC1BO15143 372 aaKnown RBP16.19■□□□□ 0.18
CD40-201ENST00000372276 AKR7A2O43488 359 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 SRSF10O75494 262 aaKnown RBP16.19■□□□□ 0.18
CD40-201ENST00000372276 SCGNO76038 276 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 GPANK1O95872 356 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 MELTFP08582 738 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 CXCL3P19876 107 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 EIF1P41567 113 aaKnown RBP16.19■□□□□ 0.18
CD40-201ENST00000372276 PER3P56645 1201 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 PCGF3Q3KNV8 242 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 OR7E24Q6IFN5 339 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 ZNF574Q6ZN55 896 aaPredicted RBP16.19■□□□□ 0.18
CD40-201ENST00000372276 KANSL1Q7Z3B3 1105 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 PPP1R3BQ86XI6 285 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 UBALD2Q8IYN6 164 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 ULBP3Q9BZM4 244 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 PRMT8Q9NR22 394 aaPredicted RBP16.19■□□□□ 0.18
CD40-201ENST00000372276 KLHL13Q9P2N7 655 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 OR52A1Q9UKL2 312 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 ELF5Q9UKW6 265 aaPredicted RBP16.19■□□□□ 0.18
CD40-201ENST00000372276 FER1L5A0AVI2 2057 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 A0A1W2PQ72 361 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 PNPP00491 289 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 IFNA7P01567 189 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 H2BFMP0C1H6 154 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 NR2C1P13056 603 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 GABRA1P14867 456 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 RAB6AP20340 208 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 ADH6P28332 368 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 RPS27P42677 84 aaKnown RBP16.19■□□□□ 0.18
CD40-201ENST00000372276 VEGFCP49767 419 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 MELKQ14680 651 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 C1orf100Q5SVJ3 147 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 C6orf183Q5T699 404 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 ZNF626Q68DY1 528 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 RAB12Q6IQ22 244 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 MTFR2Q6P444 385 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 KLHL24Q6TFL4 600 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 OR8H1Q8NGG4 311 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 OR1J4Q8NGS1 313 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 OR6N1Q8NGY5 312 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 RNF133Q8WVZ7 376 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 SLC25A44Q96H78 314 aaPredicted RBP16.19■□□□□ 0.18
CD40-201ENST00000372276 ALX4Q9H161 411 aaPredicted RBP16.19■□□□□ 0.18
CD40-201ENST00000372276 MOB1AQ9H8S9 216 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 MRPL15Q9P015 296 aaKnown RBP16.19■□□□□ 0.18
CD40-201ENST00000372276 MYOTQ9UBF9 498 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 SLC22A13Q9Y226 551 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 SIT1Q9Y3P8 196 aa16.19■□□□□ 0.18
CD40-201ENST00000372276 IGHV3-20A0A0C4DH32 117 aa16.18■□□□□ 0.18
CD40-201ENST00000372276 CIB4A0PJX0 185 aa16.18■□□□□ 0.18
CD40-201ENST00000372276 CPED1A4D0V7 1026 aa16.18■□□□□ 0.18
CD40-201ENST00000372276 ITGA5P08648 1049 aa16.18■□□□□ 0.18
CD40-201ENST00000372276 FBXO45P0C2W1 286 aa16.18■□□□□ 0.18
CD40-201ENST00000372276 TAS2R19P59542 299 aa16.18■□□□□ 0.18
CD40-201ENST00000372276 SNTA1Q13424 505 aa16.18■□□□□ 0.18
CD40-201ENST00000372276 ZNF239Q16600 458 aaKnown RBP16.18■□□□□ 0.18
CD40-201ENST00000372276 LINC00303Q3SY05 128 aa16.18■□□□□ 0.18
CD40-201ENST00000372276 SHISA6Q6ZSJ9 500 aa16.18■□□□□ 0.18
CD40-201ENST00000372276 DCXRQ7Z4W1 244 aa16.18■□□□□ 0.18
CD40-201ENST00000372276 OR13C3Q8NGS6 347 aa16.18■□□□□ 0.18
CD40-201ENST00000372276 ST7LQ8TDW4 575 aa16.18■□□□□ 0.18
CD40-201ENST00000372276 SORCS2Q96PQ0 1159 aa16.18■□□□□ 0.18
CD40-201ENST00000372276 WDR77Q9BQA1 342 aaPredicted RBP16.18■□□□□ 0.18
CD40-201ENST00000372276 METTL7AQ9H8H3 244 aa16.18■□□□□ 0.18
CD40-201ENST00000372276 WDR54Q9H977 334 aa16.18■□□□□ 0.18
CD40-201ENST00000372276 MED11Q9P086 117 aa16.18■□□□□ 0.18
CD40-201ENST00000372276 ING1Q9UK53 422 aaPredicted RBP16.18■□□□□ 0.18
CD40-201ENST00000372276 WIF1Q9Y5W5 379 aa16.18■□□□□ 0.18
CD40-201ENST00000372276 TRAV18A0A075B6X5 111 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 A0A087WV48 116 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 IGHV5-10-1A0A0J9YXX1 117 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 TMEM269A0A1B0GVZ9 245 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 LOC390937A0A1W2PQ73 354 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 TP53I11O14683 189 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 NOS1APO75052 506 aaPredicted RBP16.17■□□□□ 0.18
CD40-201ENST00000372276 HPXP02790 462 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 ALDOBP05062 364 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 SNRPD2P62316 118 aaKnown RBP16.17■□□□□ 0.18
CD40-201ENST00000372276 DHODHQ02127 395 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 POU3F1Q03052 451 aaPredicted RBP16.17■□□□□ 0.18
CD40-201ENST00000372276 FOXF1Q12946 379 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 IL11RAQ14626 422 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 ETFDHQ16134 617 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 ODF4Q2M2E3 257 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 ZNF385CQ66K41 422 aaPredicted RBP16.17■□□□□ 0.18
CD40-201ENST00000372276 C3orf33Q6P1S2 294 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 TEX261Q6UWH6 196 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 ADGRE4PQ86SQ3 457 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 TMEM229BQ8NBD8 167 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 OR2T35Q8NGX2 323 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 CCDC107Q8WV48 283 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 SLC25A28Q96A46 364 aa16.17■□□□□ 0.18
CD40-201ENST00000372276 CRB3Q9BUF7 120 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms