RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 FAM122BQ7Z309 247 aa15.14■□□□□ 0.01
HDDC3-201ENST00000330334 MEX3DQ86XN8 651 aaKnown RBP15.14■□□□□ 0.01
HDDC3-201ENST00000330334 ZNF101Q8IZC7 436 aa15.14■□□□□ 0.01
HDDC3-201ENST00000330334 AKR7LQ8NHP1 331 aa15.14■□□□□ 0.01
HDDC3-201ENST00000330334 CLDND2Q8NHS1 167 aa15.14■□□□□ 0.01
HDDC3-201ENST00000330334 C7orf34Q96L11 122 aa15.14■□□□□ 0.01
HDDC3-201ENST00000330334 POLE4Q9NR33 117 aa15.14■□□□□ 0.01
HDDC3-201ENST00000330334 TUBG2Q9NRH3 451 aa15.14■□□□□ 0.01
HDDC3-201ENST00000330334 SAMD4AQ9UPU9 718 aaKnown RBP15.14■□□□□ 0.01
HDDC3-201ENST00000330334 PRSS37A4D1T9 235 aa15.13■□□□□ 0.01
HDDC3-201ENST00000330334 XKRYO14609 159 aa15.13■□□□□ 0.01
HDDC3-201ENST00000330334 PPIHO43447 177 aaKnown RBP15.13■□□□□ 0.01
HDDC3-201ENST00000330334 H1F0P07305 194 aaKnown RBP15.13■□□□□ 0.01
HDDC3-201ENST00000330334 ADH4P08319 380 aa15.13■□□□□ 0.01
HDDC3-201ENST00000330334 ZNF26P17031 533 aaPredicted RBP15.13■□□□□ 0.01
HDDC3-201ENST00000330334 GCH1P30793 250 aa15.13■□□□□ 0.01
HDDC3-201ENST00000330334 GPR4P46093 362 aa15.13■□□□□ 0.01
HDDC3-201ENST00000330334 CCL8P80075 99 aa15.13■□□□□ 0.01
HDDC3-201ENST00000330334 ENDOGQ14249 297 aaKnown RBP15.13■□□□□ 0.01
HDDC3-201ENST00000330334 ALKBH6Q3KRA9 238 aa15.13■□□□□ 0.01
HDDC3-201ENST00000330334 GPR139Q6DWJ6 353 aa15.13■□□□□ 0.01
HDDC3-201ENST00000330334 GLYATQ6IB77 296 aa15.13■□□□□ 0.01
HDDC3-201ENST00000330334 ARL9Q6T311 187 aa15.13■□□□□ 0.01
HDDC3-201ENST00000330334 ICA1LQ8NDH6 482 aa15.13■□□□□ 0.01
HDDC3-201ENST00000330334 KLF14Q8TD94 323 aaPredicted RBP15.13■□□□□ 0.01
HDDC3-201ENST00000330334 GPX7Q96SL4 187 aaPredicted RBP15.13■□□□□ 0.01
HDDC3-201ENST00000330334 GORASP2Q9H8Y8 452 aa15.13■□□□□ 0.01
HDDC3-201ENST00000330334 ELOVL3Q9HB03 270 aa15.13■□□□□ 0.01
HDDC3-201ENST00000330334 CYSLTR2Q9NS75 346 aa15.13■□□□□ 0.01
HDDC3-201ENST00000330334 CGGBP1Q9UFW8 167 aaPredicted RBP15.13■□□□□ 0.01
HDDC3-201ENST00000330334 SIGLEC7Q9Y286 467 aa15.13■□□□□ 0.01
HDDC3-201ENST00000330334 SNX3O60493 162 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 NDUFB2O95178 105 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 NCK1P16333 377 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 OMPP47874 163 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 LIMS1P48059 325 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 ZNF81P51508 661 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 MMP15P51511 669 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 LMO4P61968 165 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 CCNIQ14094 377 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 MESTQ5EB52 335 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 IL17RELQ6ZVW7 336 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 DHRS1Q96LJ7 313 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 C4orf45Q96LM5 186 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 Q96M85 177 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 NRIP3Q9NQ35 241 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 DECR2Q9NUI1 292 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 KLHL21Q9UJP4 597 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 NDRG4Q9ULP0 352 aaKnown RBP15.12■□□□□ 0.01
HDDC3-201ENST00000330334 ADAM18Q9Y3Q7 739 aa15.12■□□□□ 0.01
HDDC3-201ENST00000330334 IGHV1-69-2A0A0G2JMI3 117 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 TEX13CA0A0J9YWL9 993 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 A0A1W2PPL8 197 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 GMNNO75496 209 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 ITGA2P17301 1181 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 SDHAP31040 664 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 ARHGDIAP52565 204 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 PPP1CBP62140 327 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 SCRN3Q0VDG4 424 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 ZNF774Q6NX45 483 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 GLCCI1Q86VQ1 547 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 SLC25A40Q8TBP6 338 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 FAM46AQ96IP4 442 aaKnown RBP15.11■□□□□ 0.01
HDDC3-201ENST00000330334 ZNF570Q96NI8 536 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 DIRC2Q96SL1 478 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 FUZQ9BT04 418 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 OR2J1Q9GZK6 312 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 KRCC1Q9NPI7 259 aaPredicted RBP15.11■□□□□ 0.01
HDDC3-201ENST00000330334 TBCCD1Q9NVR7 557 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 EGFL7Q9UHF1 273 aa15.11■□□□□ 0.01
HDDC3-201ENST00000330334 PLSCR5A0PG75 271 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 WNT9BO14905 357 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 TXNDC12O95881 172 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 SCG5P05408 212 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 MSMBP08118 114 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 GAAP10253 952 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 HSD17B1P14061 328 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 ANPEPP15144 967 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 MPV17P39210 176 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 SMIM11AP58511 58 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 LSM6P62312 80 aaKnown RBP15.1■□□□□ 0.01
HDDC3-201ENST00000330334 HFEQ30201 348 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 DPY19L2P2Q6ZN68 376 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 ZER1Q7Z7L7 766 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 ADCK1Q86TW2 530 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 RFLNBQ8N5W9 214 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 ABHD4Q8TB40 342 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 IPCEF1Q8WWN9 437 aaPredicted RBP15.1■□□□□ 0.01
HDDC3-201ENST00000330334 TMEM186Q96B77 213 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 ELMOD3Q96FG2 381 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 NSRP1Q9H0G5 558 aaKnown RBP15.1■□□□□ 0.01
HDDC3-201ENST00000330334 SAP30LQ9HAJ7 183 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 TREM2Q9NZC2 230 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 ADA2Q9NZK5 511 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 VSX1Q9NZR4 365 aaPredicted RBP15.1■□□□□ 0.01
HDDC3-201ENST00000330334 ZDHHC8Q9ULC8 765 aa15.1■□□□□ 0.01
HDDC3-201ENST00000330334 FAM157AC9JC47 383 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 H7C1C5 153 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 CDC14BO60729 498 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 NGFP01138 241 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms