RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 OR4C45A6NMZ5 311 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 ZNF716A6NP11 495 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 CENPBD1B2RD01 187 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 ZNF823P16415 610 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 LAP3P28838 519 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 TNFSF8P32971 234 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 TNFSF10P50591 281 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 CLDN18P56856 261 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 PMP22Q01453 160 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 PLGLB1Q02325 96 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 ROM1Q03395 351 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 MFGE8Q08431 387 aaPredicted RBP16.33■□□□□ 0.2
USP39-201ENST00000323701 ZNF766Q5HY98 468 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 ZNF679Q8IYX0 411 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 OR51A4Q8NGJ6 313 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 ZNF837Q96EG3 531 aaPredicted RBP16.33■□□□□ 0.2
USP39-201ENST00000323701 SCMH1Q96GD3 660 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 TTYH2Q9BSA4 534 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 MIXL1Q9H2W2 232 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 B4GALT7Q9UBV7 327 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 UGT2A1Q9Y4X1 527 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 LRP12Q9Y561 859 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 RTTNQ86VV8 2226 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 IQCMA0A1B0GVH7 501 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 ACOD1A6NK06 481 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 RGS5O15539 181 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 VAMP5O95183 116 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 PPIAP62937 165 aaKnown RBP16.33■□□□□ 0.2
USP39-201ENST00000323701 OXA1LQ15070 435 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 TRAM1Q15629 374 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 ZFP62Q8NB50 900 aaPredicted RBP16.33■□□□□ 0.2
USP39-201ENST00000323701 OR10S1Q8NGN2 331 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 OR52N5Q8NH56 324 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 S100ZQ8WXG8 99 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 GLTPQ9NZD2 209 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 DAPK2Q9UIK4 370 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 SLC22A13Q9Y226 551 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 LHFPL6Q9Y693 200 aa16.33■□□□□ 0.2
USP39-201ENST00000323701 NCOA6Q14686 2063 aaPredicted RBP16.32■□□□□ 0.2
USP39-201ENST00000323701 SPTBN4Q9H254 2564 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 WISP2O76076 250 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 HRGP04196 525 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 CD1AP06126 327 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 CD46P15529 392 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 MTNR1BP49286 362 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 C3AR1Q16581 482 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 WDR38Q5JTN6 314 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 TEX30Q5JUR7 227 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 CCDC190Q86UF4 302 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 PARP16Q8N5Y8 322 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 ABHD3Q8WU67 409 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 MROQ9BYG7 248 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 ABCB9Q9NP78 766 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 B3GAT2Q9NPZ5 323 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 CYB5R1Q9UHQ9 305 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 ZNF281Q9Y2X9 895 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 FLVCR1Q9Y5Y0 555 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 PEX16Q9Y5Y5 336 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 BSNQ9UPA5 3926 aa16.32■□□□□ 0.2
USP39-201ENST00000323701 A0A0G2JK05 382 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 ANKRD61A6NGH8 418 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 KLRC4-KLRK1H3BQV0 150 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 PHYHO14832 338 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 DOK2O60496 412 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 S100A5P33763 92 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 RSPO4Q2I0M5 234 aaPredicted RBP16.31■□□□□ 0.2
USP39-201ENST00000323701 CFAP77Q6ZQR2 320 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 ASB18Q6ZVZ8 466 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 KRT77Q7Z794 578 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 ASB17Q8WXJ9 295 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 ATF6BQ99941 703 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 FOXD3Q9UJU5 478 aaPredicted RBP16.31■□□□□ 0.2
USP39-201ENST00000323701 DNPH1O43598 174 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 AQP8O94778 261 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 UCHL1P09936 223 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 HYAL4Q2M3T9 481 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 ABLIM2Q6H8Q1 611 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 UNQ9370/PRO34162Q6UXP9 181 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.31■□□□□ 0.2
USP39-201ENST00000323701 OR5AK2Q8NH90 309 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 RNF128Q8TEB7 428 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 TMEM54Q969K7 222 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 C4orf45Q96LM5 186 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 NEURL2Q9BR09 285 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 DEFB127Q9H1M4 99 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 NOX4Q9NPH5 578 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 KCNMB2Q9Y691 235 aa16.31■□□□□ 0.2
USP39-201ENST00000323701 SRSF10O75494 262 aaKnown RBP16.3■□□□□ 0.2
USP39-201ENST00000323701 CSNK1A1P48729 337 aa16.3■□□□□ 0.2
USP39-201ENST00000323701 MADCAM1Q13477 382 aa16.3■□□□□ 0.2
USP39-201ENST00000323701 TRIM16LQ309B1 348 aa16.3■□□□□ 0.2
USP39-201ENST00000323701 SLC25A35Q3KQZ1 300 aa16.3■□□□□ 0.2
USP39-201ENST00000323701 NCCRP1Q6ZVX7 275 aaPredicted RBP16.3■□□□□ 0.2
USP39-201ENST00000323701 ZNF454Q8N9F8 522 aa16.3■□□□□ 0.2
USP39-201ENST00000323701 OR6N1Q8NGY5 312 aa16.3■□□□□ 0.2
USP39-201ENST00000323701 GPRIN2O60269 458 aa16.3■□□□□ 0.2
USP39-201ENST00000323701 ZNF708P17019 499 aa16.3■□□□□ 0.2
USP39-201ENST00000323701 CEP78Q5JTW2 689 aa16.3■□□□□ 0.2
USP39-201ENST00000323701 HDDC2Q7Z4H3 204 aa16.3■□□□□ 0.2
USP39-201ENST00000323701 IL17RDQ8NFM7 739 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms