RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 FABP5Q01469 135 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF45Q02386 682 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 RIPPLY2Q5TAB7 128 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 HBMQ6B0K9 141 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 VASNQ6EMK4 673 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 B3GLCTQ6Y288 498 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 CREB3L2Q70SY1 520 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 GGNQ86UU5 652 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF511Q8NB15 262 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 OR10H5Q8NGA6 315 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 OR9K2Q8NGE7 335 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 NEIL3Q8TAT5 605 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 ACOT12Q8WYK0 555 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 TMEM45BQ96B21 275 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 PGLYRP3Q96LB9 341 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 TSSK2Q96PF2 358 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 SIGLEC12Q96PQ1 595 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 OR8B4Q96RC9 309 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 TBX5Q99593 518 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 TMEM185BQ9H7F4 350 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 GNG8Q9UK08 70 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 SLC5A6Q9Y289 635 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 NCOA6Q14686 2063 aaPredicted RBP11.71□□□□□ -0.53
SLIRP-201ENST00000238688 IGKV3D-15A0A087WSY6 115 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 A0A0G2JMM0 328 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 A0A0J9YW62 118 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 TRBV2A0A0J9YWF9 115 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 A0A1W2PPB8 328 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 A0A1W2PRS3 328 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 SLC35F4A4IF30 521 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 KIR3DP1A8MWS1 328 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF879B4DU55 563 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 G3V3Y1 287 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 H7C1C5 153 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF593O00488 134 aaPredicted RBP11.71□□□□□ -0.53
SLIRP-201ENST00000238688 TRAPPC6AO75865 159 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 RAF1P04049 648 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 HLA-DOBP13765 273 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 MYL9P24844 172 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 COL8A1P27658 744 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 SHC1P29353 583 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 GDI2P50395 445 aaKnown RBP11.71□□□□□ -0.53
SLIRP-201ENST00000238688 LCN6P62502 163 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 PLGLB1Q02325 96 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 MELKQ14680 651 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 NRN1LQ496H8 165 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 C4orf17Q53FE4 359 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF766Q5HY98 468 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 FOXL2NBQ6ZUU3 175 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 DPY19L4Q7Z388 723 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 GPAT4Q86UL3 456 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 OR52N5Q8NH56 324 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 WDFY2Q96P53 400 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 MRI1Q9BV20 369 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 CDADC1Q9BWV3 514 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 COMMD4Q9H0A8 199 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 B3GAT2Q9NPZ5 323 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 AKIP1Q9NQ31 210 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 EMC3Q9P0I2 261 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 COPS3Q9UNS2 423 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF281Q9Y2X9 895 aa11.71□□□□□ -0.53
SLIRP-201ENST00000238688 CRYBG3Q68DQ2 2970 aa11.71□□□□□ -0.54
SLIRP-201ENST00000238688 CACNA1CQ13936 2221 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 CYTIPO60759 359 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 RFPL3SP0C7P2 107 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 ZNF708P17019 499 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 CD79BP40259 229 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 CSNK1A1P48729 337 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 MEOX1P50221 254 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 PSMD7P51665 324 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 RIDAP52758 137 aaKnown RBP11.7□□□□□ -0.54
SLIRP-201ENST00000238688 ALKBH1Q13686 389 aaKnown RBP11.7□□□□□ -0.54
SLIRP-201ENST00000238688 DOC2BQ14184 412 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 SLC10A1Q14973 349 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 INAQ16352 499 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 TP53I3Q53FA7 332 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 LIPNQ5VXI9 398 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 C22orf42Q6IC83 251 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 MZT2AQ6P582 158 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 SLC25A47Q6Q0C1 308 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 ARL9Q6T311 187 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 SSX6Q7RTT6 188 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 YRDCQ86U90 279 aaKnown RBP11.7□□□□□ -0.54
SLIRP-201ENST00000238688 YIPF7Q8N8F6 280 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 OR5M1Q8NGP8 315 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 ABHD4Q8TB40 342 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 RNF128Q8TEB7 428 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 ZNRF4Q8WWF5 429 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 GHSRQ92847 366 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 TMEM54Q969K7 222 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 TM9SF2Q99805 663 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 TMED9Q9BVK6 235 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.7□□□□□ -0.54
SLIRP-201ENST00000238688 MOB1AQ9H8S9 216 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 ZDHHC11Q9H8X9 412 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 MRPL22Q9NWU5 206 aaKnown RBP11.7□□□□□ -0.54
SLIRP-201ENST00000238688 MED29Q9NX70 200 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 GLTPQ9NZD2 209 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 OSGIN2Q9Y236 505 aa11.7□□□□□ -0.54
SLIRP-201ENST00000238688 COA3Q9Y2R0 106 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms