RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 IL10RAQ13651 578 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 EIF2S3LQ2VIR3 472 aaKnown RBP13.35□□□□□ -0.27
VPS36-207ENST00000611132 ZNF764Q96H86 408 aaPredicted RBP13.35□□□□□ -0.27
VPS36-207ENST00000611132 OR1F2PQ96R84 312 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 RBBP6Q7Z6E9 1792 aaKnown RBP13.35□□□□□ -0.27
VPS36-207ENST00000611132 BLACEA4D250 179 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 PRAMEF25A6NGN4 478 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 HIDE1A8MVS5 230 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 ZNF16P17020 682 aaPredicted RBP13.35□□□□□ -0.27
VPS36-207ENST00000611132 ZNF43P17038 809 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 ZNF85Q03923 595 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 SLC30A7Q8NEW0 376 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 SLC22A8Q8TCC7 542 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 C20orf24Q9BUV8 137 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 KIR2DS5A0A0G2JLQ3 304 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 A0A0G2JNG1 304 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 TTLL8A6PVC2 850 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 KIR2DS3K7RE56 304 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 SLC17A2O00624 439 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 NTN1O95631 604 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 KIAA0141Q14154 515 aaPredicted RBP13.35□□□□□ -0.27
VPS36-207ENST00000611132 KIR2DS5Q14953 304 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 KIRREL2Q6UWL6 708 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 LINC00346Q8IVM7 164 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 ZNF695Q8IW36 515 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 TMEM229BQ8NBD8 167 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 OR6K3Q8NGY3 331 aa13.35□□□□□ -0.27
VPS36-207ENST00000611132 SENP5Q96HI0 755 aaPredicted RBP13.35□□□□□ -0.27
VPS36-207ENST00000611132 CCNL2Q96S94 520 aaPredicted RBP13.35□□□□□ -0.27
VPS36-207ENST00000611132 VSX1Q9NZR4 365 aaPredicted RBP13.35□□□□□ -0.27
VPS36-207ENST00000611132 ZNF223Q9UK11 482 aaPredicted RBP13.35□□□□□ -0.27
VPS36-207ENST00000611132 SF3B6Q9Y3B4 125 aaKnown RBP13.35□□□□□ -0.27
VPS36-207ENST00000611132 CDC14CA4D256 554 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 TAAR5O14804 337 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 BRINP1O60477 761 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 SERPINA2P20848 420 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 GABRR1P24046 479 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 CSF2RBP32927 897 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 NFATC4Q14934 902 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 RNF212Q495C1 297 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 SLC36A2Q495M3 483 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 EMC4Q5J8M3 183 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 P4HA3Q7Z4N8 544 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 OR11H4Q8NGC9 324 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 JAM3Q9BX67 310 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 ZNF160Q9HCG1 818 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 FBXO4Q9UKT5 387 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 VDAC3Q9Y277 283 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 HSPB2A8KAH6 182 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 NPIPA2E9PIF3 369 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 F5H5K5 113 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 NPIPA3F8WFD2 350 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 LILRB3O75022 631 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 CFDP00746 253 aaPredicted RBP13.34□□□□□ -0.27
VPS36-207ENST00000611132 ZNF44P15621 663 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 ZNF77Q15935 545 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 HSPB2Q16082 182 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 SLC22A25Q6T423 547 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 SSX9Q7RTT3 188 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 LRRTM1Q86UE6 522 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 ANGPTL5Q86XS5 388 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 ZNF561Q8N587 486 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 EDAQ92838 391 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 SSX3Q99909 188 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 TINAGL1Q9GZM7 467 aaPredicted RBP13.34□□□□□ -0.27
VPS36-207ENST00000611132 ZBP1Q9H171 429 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 C1orf198Q9H425 327 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 ZFP64Q9NPA5 681 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 SLC22A13Q9Y226 551 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 COL4A5P29400 1685 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 LOC105371267A0A1B0GV96 52 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 IFNA10P01566 189 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 NDUFA6P56556 154 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 MAT1AQ00266 395 aaKnown RBP13.34□□□□□ -0.27
VPS36-207ENST00000611132 ZNF273Q14593 569 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 PWWP2BQ6NUJ5 590 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 FBXW12Q6X9E4 464 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 RTL10Q7L3V2 364 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 KDM8Q8N371 416 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 ZNF709Q8N972 641 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 PHYHIPLQ96FC7 376 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 FBRSQ9HAH7 460 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 CREBZFQ9NS37 354 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 CA5BQ9Y2D0 317 aa13.34□□□□□ -0.27
VPS36-207ENST00000611132 LOC107986453A0A1B0GWG9 222 aa13.33□□□□□ -0.27
VPS36-207ENST00000611132 NSA2O95478 260 aaKnown RBP13.33□□□□□ -0.27
VPS36-207ENST00000611132 HSD17B11Q8NBQ5 300 aa13.33□□□□□ -0.27
VPS36-207ENST00000611132 PIKFYVEQ9Y2I7 2098 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 TO15178 435 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 OGG1O15527 345 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 CX3CR1P49238 355 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 NUDCD2Q8WVJ2 157 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 PTP4A1Q93096 173 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 PARP12Q9H0J9 701 aaKnown RBP13.33□□□□□ -0.28
VPS36-207ENST00000611132 C11orf49Q9H6J7 331 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 SFXN1Q9H9B4 322 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.33□□□□□ -0.28
VPS36-207ENST00000611132 SLC2A4RGQ9NR83 387 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 FAM86C1Q9NVL1 165 aa13.33□□□□□ -0.28
VPS36-207ENST00000611132 HAO2Q9NYQ3 351 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms