RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 GTPBP8Q8N3Z3 284 aaPredicted RBP16.2■□□□□ 0.18
SMPD3-211ENST00000568373 NTNG2Q96CW9 530 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 MRPL13Q9BYD1 178 aaKnown RBP16.2■□□□□ 0.18
SMPD3-211ENST00000568373 PROK2Q9HC23 129 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 KLHL9Q9P2J3 617 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 TCFL5Q9UL49 500 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 CAMK2AQ9UQM7 478 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 TRAV8-7A0A075B6U6 113 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 RPS18P62269 152 aaKnown RBP16.2■□□□□ 0.18
SMPD3-211ENST00000568373 MFGE8Q08431 387 aaPredicted RBP16.2■□□□□ 0.18
SMPD3-211ENST00000568373 TMEM176BQ3YBM2 270 aaPredicted RBP16.2■□□□□ 0.18
SMPD3-211ENST00000568373 SLC22A10Q63ZE4 541 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 ASB18Q6ZVZ8 466 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 GLCCI1Q86VQ1 547 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 GLB1L2Q8IW92 636 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 CMTM4Q8IZR5 234 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 ST7LQ8TDW4 575 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 TSEN15Q8WW01 171 aaKnown RBP16.2■□□□□ 0.18
SMPD3-211ENST00000568373 ITFG2Q969R8 447 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 RBP7Q96R05 134 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 HPF1Q9NWY4 346 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 NLKQ9UBE8 527 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 GTF2A1LQ9UNN4 478 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 SLC22A13Q9Y226 551 aa16.2■□□□□ 0.18
SMPD3-211ENST00000568373 MRPS7Q9Y2R9 242 aaKnown RBP16.2■□□□□ 0.18
SMPD3-211ENST00000568373 PMS2P1A4D2B8 440 aa16.19■□□□□ 0.18
SMPD3-211ENST00000568373 H3BSH0 61 aa16.19■□□□□ 0.18
SMPD3-211ENST00000568373 MASP2O00187 686 aa16.19■□□□□ 0.18
SMPD3-211ENST00000568373 TRAF3IP2O43734 574 aaPredicted RBP16.19■□□□□ 0.18
SMPD3-211ENST00000568373 CALCBP10092 127 aa16.19■□□□□ 0.18
SMPD3-211ENST00000568373 TCN2P20062 427 aa16.19■□□□□ 0.18
SMPD3-211ENST00000568373 CLDN12P56749 244 aa16.19■□□□□ 0.18
SMPD3-211ENST00000568373 ZNF239Q16600 458 aaKnown RBP16.19■□□□□ 0.18
SMPD3-211ENST00000568373 RSBN1Q5VWQ0 802 aaPredicted RBP16.19■□□□□ 0.18
SMPD3-211ENST00000568373 TIPARPQ7Z3E1 657 aaKnown RBP16.19■□□□□ 0.18
SMPD3-211ENST00000568373 DCXRQ7Z4W1 244 aa16.19■□□□□ 0.18
SMPD3-211ENST00000568373 CATSPERDQ86XM0 798 aa16.19■□□□□ 0.18
SMPD3-211ENST00000568373 ZBTB8BQ8NAP8 495 aaPredicted RBP16.19■□□□□ 0.18
SMPD3-211ENST00000568373 SLC25A38Q96DW6 304 aa16.19■□□□□ 0.18
SMPD3-211ENST00000568373 ZFP3Q96NJ6 502 aa16.19■□□□□ 0.18
SMPD3-211ENST00000568373 PISDQ9UG56 409 aa16.19■□□□□ 0.18
SMPD3-211ENST00000568373 A0A0B4J293 547 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 ZNF814B7Z6K7 855 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 TNFRSF10AO00220 468 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 ADRB1P08588 477 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 LIFP15018 202 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 OTX2P32243 289 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 GPR176Q14439 515 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 THEM4Q5T1C6 240 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 TMEM225Q6GV28 225 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 FCRLAQ7L513 359 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 GPAT4Q86UL3 456 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 LINC00346Q8IVM7 164 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 OR6F1Q8NGZ6 308 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 CT55Q8WUE5 264 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 YIPF5Q969M3 257 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 MIB2Q96AX9 1013 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 GNRHR2Q96P88 292 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 TAAR9Q96RI9 348 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 RABL2AQ9UBK7 228 aaPredicted RBP16.18■□□□□ 0.18
SMPD3-211ENST00000568373 RABL2BQ9UNT1 228 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 SDK2Q58EX2 2172 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 ANXA2P2A6NMY6 339 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 CTDSPLO15194 276 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 SRSF10O75494 262 aaKnown RBP16.18■□□□□ 0.18
SMPD3-211ENST00000568373 IGHG1P01857 330 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 MAS1P04201 325 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 ANXA2P07355 339 aaKnown RBP16.18■□□□□ 0.18
SMPD3-211ENST00000568373 TRAPPC2P0DI81 140 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 TRAPPC2BP0DI82 140 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 DSCR4P56555 118 aaPredicted RBP16.18■□□□□ 0.18
SMPD3-211ENST00000568373 CLDN20P56880 219 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 TMPRSS12Q86WS5 348 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 DNAAF1Q8NEP3 725 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 NOXO1Q8NFA2 376 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 PPP1R14AQ96A00 147 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 SLC25A44Q96H78 314 aaPredicted RBP16.18■□□□□ 0.18
SMPD3-211ENST00000568373 OXGR1Q96P68 337 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 DDA1Q9BW61 102 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 ABCG5Q9H222 651 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 RYDENQ9NUL5 291 aaKnown RBP16.18■□□□□ 0.18
SMPD3-211ENST00000568373 OR5V1Q9UGF6 321 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 R4GMQ9 66 aa16.18■□□□□ 0.18
SMPD3-211ENST00000568373 AQP7P3A6NL99 342 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 SULT2B1O00204 365 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 RAB40ALP0C0E4 278 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 PGA4P0DJD7 388 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 PGA3P0DJD8 388 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 ICAM2P13598 275 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 CD59P13987 128 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 SLC6A1P30531 599 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 CLRN1P58418 232 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 SLC35A1P78382 337 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 DGCR2P98153 550 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 CBX3Q13185 183 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 SLC36A2Q495M3 483 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 DEGS2Q6QHC5 323 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 TMPPEQ6ZT21 453 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 HDDC2Q7Z4H3 204 aa16.17■□□□□ 0.18
SMPD3-211ENST00000568373 OR1J4Q8NGS1 313 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms