RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 TMEM225Q6GV28 225 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 LRRN1Q6UXK5 716 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 PRSS33Q8NF86 280 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 SLC26A10Q8NG04 563 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 ORAI1Q96D31 301 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 DIRAS2Q96HU8 199 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 ST6GAL2Q96JF0 529 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 MRPL13Q9BYD1 178 aaKnown RBP8.4□□□□□ -1.06
LINC00838-201ENST00000562956 TEKT2Q9UIF3 430 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 TRAPPC4Q9Y296 219 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 ZNF281Q9Y2X9 895 aa8.4□□□□□ -1.06
LINC00838-201ENST00000562956 LRRC3CA6NJW4 275 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 AQP7P3A6NL99 342 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 GPRIN2O60269 458 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 UCHL1P09936 223 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 DEFA1P59665 94 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 DEFA3P59666 94 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 SLC35A1P78382 337 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 ALKBH1Q13686 389 aaKnown RBP8.4□□□□□ -1.07
LINC00838-201ENST00000562956 DCAF10Q5QP82 559 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 HBMQ6B0K9 141 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 SPINK14Q6IE38 97 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 SLC18B1Q6NT16 456 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 TPRA1Q86W33 373 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 RAB43Q86YS6 212 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 NSMAFQ92636 917 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 SNAPC3Q92966 411 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 NKD1Q969G9 470 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 OR8B4Q96RC9 309 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 B3GAT2Q9NPZ5 323 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 KLHL13Q9P2N7 655 aa8.4□□□□□ -1.07
LINC00838-201ENST00000562956 PINLYPA6NC86 204 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 ACOD1A6NK06 481 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 H0YC42 278 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 PHYHO14832 338 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 PIN1P1O15428 100 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 GATBO75879 557 aaKnown RBP8.39□□□□□ -1.07
LINC00838-201ENST00000562956 PMS2P2O95744 297 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 CD96P40200 585 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 CAMK2DQ13557 499 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 EIF2B1Q14232 305 aaKnown RBP8.39□□□□□ -1.07
LINC00838-201ENST00000562956 SLC25A35Q3KQZ1 300 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 SFXN4Q6P4A7 337 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 FAM131AQ6UXB0 335 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 UNQ9370/PRO34162Q6UXP9 181 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 YRDCQ86U90 279 aaKnown RBP8.39□□□□□ -1.07
LINC00838-201ENST00000562956 CCDC28AQ8IWP9 274 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 PRSS35Q8N3Z0 413 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 OXGR1Q96P68 337 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 SRRQ9GZT4 340 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 ELOVL3Q9HB03 270 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 NOX4Q9NPH5 578 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 AHCTF1Q8WYP5 2266 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 EML6Q6ZMW3 1958 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 IGHV3-15A0A0B4J1V0 119 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 TRAV1-2A0A0B4J238 106 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 FABP12A6NFH5 140 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 SMLR1H3BR10 107 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 LRP3O75074 770 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 PGA4P0DJD7 388 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 PGA3P0DJD8 388 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 ZNF17P17021 662 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 CFL1P23528 166 aaKnown RBP8.39□□□□□ -1.07
LINC00838-201ENST00000562956 THBS2P35442 1172 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 B3GALT5-AS1P59052 145 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 PPP3R1P63098 170 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 GABREP78334 506 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 H3F3AP84243 136 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 ZNF239Q16600 458 aaKnown RBP8.39□□□□□ -1.07
LINC00838-201ENST00000562956 BAK1Q16611 211 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 YIF1BQ5BJH7 314 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 CARD17Q5XLA6 110 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 DNM1P34Q6PK57 102 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 PAMR1Q6UXH9 720 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 RDH10Q8IZV5 341 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 IL22RA1Q8N6P7 574 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 OR2G2Q8NGZ5 317 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 OR5AK2Q8NH90 309 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 ASB17Q8WXJ9 295 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 PIGQQ9BRB3 760 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 ABHD6Q9BV23 337 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 NARFLQ9H6Q4 476 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 RYDENQ9NUL5 291 aaKnown RBP8.39□□□□□ -1.07
LINC00838-201ENST00000562956 LRFN1Q9P244 771 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 RASD1Q9Y272 281 aa8.39□□□□□ -1.07
LINC00838-201ENST00000562956 TRABD2BA6NFA1 517 aa8.38□□□□□ -1.07
LINC00838-201ENST00000562956 PCP4L1A6NKN8 68 aa8.38□□□□□ -1.07
LINC00838-201ENST00000562956 ZNF879B4DU55 563 aa8.38□□□□□ -1.07
LINC00838-201ENST00000562956 AKR7A2O43488 359 aa8.38□□□□□ -1.07
LINC00838-201ENST00000562956 KHDRBS3O75525 346 aaKnown RBP8.38□□□□□ -1.07
LINC00838-201ENST00000562956 ARL6IP5O75915 188 aa8.38□□□□□ -1.07
LINC00838-201ENST00000562956 SLC2A2P11168 524 aaPredicted RBP8.38□□□□□ -1.07
LINC00838-201ENST00000562956 ZNF43P17038 809 aa8.38□□□□□ -1.07
LINC00838-201ENST00000562956 RAB3BP20337 219 aa8.38□□□□□ -1.07
LINC00838-201ENST00000562956 ITGA3P26006 1051 aa8.38□□□□□ -1.07
LINC00838-201ENST00000562956 SRD5A2P31213 254 aa8.38□□□□□ -1.07
LINC00838-201ENST00000562956 OR3A3P47888 321 aa8.38□□□□□ -1.07
LINC00838-201ENST00000562956 ROM1Q03395 351 aa8.38□□□□□ -1.07
LINC00838-201ENST00000562956 SLC17A1Q14916 467 aa8.38□□□□□ -1.07
LINC00838-201ENST00000562956 TGIF1Q15583 401 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms