RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 LOC102723996A0A087X1L8 192 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 CENPXA8MT69 81 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 G3V3Y1 287 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 EIF1AYO14602 144 aaKnown RBP14.6□□□□□ -0.07
COL4A1-204ENST00000543140 MT-ND4P03905 459 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 GIFP27352 417 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 MC2RQ01718 297 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 TEX30Q5JUR7 227 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 NDUFAF7Q7L592 441 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 DND1Q8IYX4 353 aaKnown RBP14.6□□□□□ -0.07
COL4A1-204ENST00000543140 OR52N5Q8NH56 324 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 TP63Q9H3D4 680 aaPredicted RBP14.6□□□□□ -0.07
COL4A1-204ENST00000543140 B3GAT1Q9P2W7 334 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 EMC9Q9Y3B6 208 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 IGLV3-32A0A0A0MS00 114 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 CENPBD1B2RD01 187 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 ETV2O00321 342 aaPredicted RBP14.6□□□□□ -0.07
COL4A1-204ENST00000543140 TMIGD3P0DMS9 266 aaPredicted RBP14.6□□□□□ -0.07
COL4A1-204ENST00000543140 COX6A1P12074 109 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 CCR6P51684 374 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 DLX5P56178 289 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 TRA2AQ13595 282 aaKnown RBP eCLIP14.6□□□□□ -0.07
COL4A1-204ENST00000543140 BCL2L15Q5TBC7 163 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 FDX2Q6P4F2 183 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 TMEM105Q8N8V8 129 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 MCHR2Q969V1 340 aa14.6□□□□□ -0.07
COL4A1-204ENST00000543140 S100A16Q96FQ6 103 aaKnown RBP14.6□□□□□ -0.07
COL4A1-204ENST00000543140 HSPB2A8KAH6 182 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 ZNF814B7Z6K7 855 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 RAF1P04049 648 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 SYPP08247 313 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 KLK2P20151 261 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 EIF1AXP47813 144 aaKnown RBP14.59□□□□□ -0.07
COL4A1-204ENST00000543140 SF3B4Q15427 424 aaKnown RBP eCLIP14.59□□□□□ -0.07
COL4A1-204ENST00000543140 HSPB2Q16082 182 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 SLC25A53Q5H9E4 307 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 C3orf33Q6P1S2 294 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 LRFN4Q6PJG9 635 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 DNM1P34Q6PK57 102 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 GLB1L2Q8IW92 636 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 SMIM4Q8WVI0 70 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 IMMP1LQ96LU5 166 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 MOV10Q9HCE1 1003 aaKnown RBP14.59□□□□□ -0.07
COL4A1-204ENST00000543140 CENPMQ9NSP4 180 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 MCUBQ9NWR8 336 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 BOLA1Q9Y3E2 137 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 B3GALT1Q9Y5Z6 326 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 TP53I11O14683 189 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 CDK2P24941 298 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 PTGS2P35354 604 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 GDNFP39905 211 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 CCR9P51686 369 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 ART1P52961 327 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 MRPS15P82914 257 aaKnown RBP14.59□□□□□ -0.07
COL4A1-204ENST00000543140 SNTA1Q13424 505 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 CAMK2DQ13557 499 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 TMEM176BQ3YBM2 270 aaPredicted RBP14.59□□□□□ -0.07
COL4A1-204ENST00000543140 TMEM69Q5SWH9 247 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 BAIAP2L2Q6UXY1 529 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 OR52I2Q8NH67 350 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 CMTM3Q96MX0 182 aa14.59□□□□□ -0.07
COL4A1-204ENST00000543140 RAMP1O60894 148 aa14.58□□□□□ -0.07
COL4A1-204ENST00000543140 CALCBP10092 127 aa14.58□□□□□ -0.07
COL4A1-204ENST00000543140 IFITM2Q01629 132 aa14.58□□□□□ -0.07
COL4A1-204ENST00000543140 CARD17Q5XLA6 110 aa14.58□□□□□ -0.07
COL4A1-204ENST00000543140 ZNF454Q8N9F8 522 aa14.58□□□□□ -0.07
COL4A1-204ENST00000543140 DPAGT1Q9H3H5 408 aa14.58□□□□□ -0.07
COL4A1-204ENST00000543140 KCNK15Q9H427 330 aa14.58□□□□□ -0.07
COL4A1-204ENST00000543140 CDCP1Q9H5V8 836 aa14.58□□□□□ -0.07
COL4A1-204ENST00000543140 PTGES2Q9H7Z7 377 aa14.58□□□□□ -0.07
COL4A1-204ENST00000543140 ZNF160Q9HCG1 818 aa14.58□□□□□ -0.07
COL4A1-204ENST00000543140 FOXJ3Q9UPW0 622 aa14.58□□□□□ -0.07
COL4A1-204ENST00000543140 A6NL46 340 aa14.58□□□□□ -0.08
COL4A1-204ENST00000543140 KHDRBS3O75525 346 aaKnown RBP14.58□□□□□ -0.08
COL4A1-204ENST00000543140 PTH2RP49190 550 aa14.58□□□□□ -0.08
COL4A1-204ENST00000543140 SNTB2Q13425 540 aaKnown RBP14.58□□□□□ -0.08
COL4A1-204ENST00000543140 CLPPQ16740 277 aaPredicted RBP14.58□□□□□ -0.08
COL4A1-204ENST00000543140 HACD4Q5VWC8 232 aa14.58□□□□□ -0.08
COL4A1-204ENST00000543140 TMEM225Q6GV28 225 aa14.58□□□□□ -0.08
COL4A1-204ENST00000543140 ASPHD2Q6ICH7 369 aa14.58□□□□□ -0.08
COL4A1-204ENST00000543140 CATSPERDQ86XM0 798 aa14.58□□□□□ -0.08
COL4A1-204ENST00000543140 UEVLDQ8IX04 471 aa14.58□□□□□ -0.08
COL4A1-204ENST00000543140 OR11G2Q8NGC1 345 aa14.58□□□□□ -0.08
COL4A1-204ENST00000543140 OR2Y1Q8NGV0 311 aa14.58□□□□□ -0.08
COL4A1-204ENST00000543140 ST7LQ8TDW4 575 aa14.58□□□□□ -0.08
COL4A1-204ENST00000543140 JSRP1Q96MG2 331 aaPredicted RBP14.58□□□□□ -0.08
COL4A1-204ENST00000543140 GNRHR2Q96P88 292 aa14.58□□□□□ -0.08
COL4A1-204ENST00000543140 CACNG6Q9BXT2 260 aa14.58□□□□□ -0.08
COL4A1-204ENST00000543140 ZNF700Q9H0M5 742 aa14.58□□□□□ -0.08
COL4A1-204ENST00000543140 KLK11Q9UBX7 282 aa14.58□□□□□ -0.08
COL4A1-204ENST00000543140 DHDHQ9UQ10 334 aa14.58□□□□□ -0.08
COL4A1-204ENST00000543140 A0A0A6YYJ9 748 aa14.57□□□□□ -0.08
COL4A1-204ENST00000543140 FAM47E-STBD1D6RA91 191 aa14.57□□□□□ -0.08
COL4A1-204ENST00000543140 GSTZ1O43708 216 aaPredicted RBP14.57□□□□□ -0.08
COL4A1-204ENST00000543140 LDOC1O95751 146 aaPredicted RBP14.57□□□□□ -0.08
COL4A1-204ENST00000543140 TCRBP04435 133 aa14.57□□□□□ -0.08
COL4A1-204ENST00000543140 CCL3P10147 92 aa14.57□□□□□ -0.08
COL4A1-204ENST00000543140 MAP2K6P52564 334 aa14.57□□□□□ -0.08
COL4A1-204ENST00000543140 RPS18P62269 152 aaKnown RBP14.57□□□□□ -0.08
COL4A1-204ENST00000543140 KLF9Q13886 244 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms