RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 FREM3P0C091 2139 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 HOXD4P09016 255 aaPredicted RBP13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 CCL3P10147 92 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 MAP2K6P52564 334 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 OR12D2P58182 307 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 PRPS1P60891 318 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 FOXK1P85037 733 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 HSD17B12Q53GQ0 312 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 ALG10Q5BKT4 473 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 DPY19L2P2Q6ZN68 376 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 OR51L1Q8NGJ5 315 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 OR56B4Q8NH76 319 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 HAVCR2Q8TDQ0 301 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 RADILQ96JH8 1075 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 C4orf36Q96KX1 117 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 CHIAQ9BZP6 476 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 AUNIPQ9H7T9 357 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 IL17BQ9UHF5 180 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 BAIAP2Q9UQB8 552 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 HIF3AQ9Y2N7 669 aa13.73□□□□□ -0.21
CLPTM1-202ENST00000541297 TRAV36DV7A0A075B6V5 113 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 STMND1H3BQB6 276 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 HPP00738 406 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 HIST1H2ABP04908 130 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 IL11P20809 199 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 NBL1P41271 181 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 BLVRAP53004 296 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 RAG2P55895 527 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 MLF1P58340 268 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 GABREP78334 506 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 RPL18Q07020 188 aaKnown RBP13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 KLF9Q13886 244 aaPredicted RBP13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 HIST3H2AQ7L7L0 130 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 ZPLD1Q8TCW7 415 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 HIST1H2ACQ93077 130 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 PGLYRP3Q96LB9 341 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 NMNAT3Q96T66 252 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 PTDSS2Q9BVG9 487 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 C20orf85Q9H1P6 137 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 BRD7Q9NPI1 651 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 NRIP3Q9NQ35 241 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 SDHAF3Q9NRP4 125 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 NPTNQ9Y639 398 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 A0A1W2PRG6 482 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 A8MVM7 634 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 C11orf98E9PRG8 122 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 SC5DO75845 299 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 TSPAN9O75954 239 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 IFNGP01579 166 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 BGLAPP02818 100 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 ZNF41P51814 821 aaPredicted RBP13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 CTXN1P60606 82 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 TSPAN5P62079 268 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 PITPNAQ00169 270 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 C1orf140Q5VVS0 124 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 Q6ZTK2 550 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 IL22RA1Q8N6P7 574 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 WDSUB1Q8N9V3 476 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 OR2T4Q8NH00 348 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 LHFPL5Q8TAF8 219 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 GHSRQ92847 366 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 Q96M85 177 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 DDOQ99489 341 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 HPF1Q9NWY4 346 aa13.72□□□□□ -0.21
CLPTM1-202ENST00000541297 MED13Q9UHV7 2174 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 H3BML4 177 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 BET1O15155 118 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 GMDSO60547 372 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 F10P00742 488 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 IGF2P01344 180 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 OPN1LWP04000 364 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 ACSM4P0C7M7 580 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 SLC22A10Q63ZE4 541 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 MDGA2Q7Z553 956 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 OR5J2Q8NH18 312 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 LIPHQ8WWY8 451 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 ST8SIA1Q92185 356 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 WBP1Q96G27 269 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 ARL5BQ96KC2 179 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 TEAD3Q99594 435 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 GPR87Q9BY21 358 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 FKRPQ9H9S5 495 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 PTPRBP23467 1997 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 C21orf140B9A014 251 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 ICAM2P13598 275 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 SUMO3P55854 103 aaPredicted RBP13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 TGIF1Q15583 401 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 TRAM1Q15629 374 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 SLC6A19Q695T7 634 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 JSRP1Q96MG2 331 aaPredicted RBP13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 LINC00052Q96N35 136 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 TTTY10Q9BZA0 68 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 ACTR6Q9GZN1 396 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 PPA2Q9H2U2 334 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 TMEM185BQ9H7F4 350 aa13.71□□□□□ -0.21
CLPTM1-202ENST00000541297 TERTO14746 1132 aaKnown RBP13.7□□□□□ -0.22
CLPTM1-202ENST00000541297 NPIPB7O75200 414 aa13.7□□□□□ -0.22
CLPTM1-202ENST00000541297 PEX14O75381 377 aa13.7□□□□□ -0.22
CLPTM1-202ENST00000541297 PLGP00747 810 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms