RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

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Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 RPL4P36578 427 aaKnown RBP5.08□□□□□ -1.6
MRE11-209ENST00000540013 ACVR1BP36896 505 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 CCR2P41597 374 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 GPR1P46091 355 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 GNPDA1P46926 289 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 TMED10P49755 219 aaKnown RBP5.08□□□□□ -1.6
MRE11-209ENST00000540013 GPX6P59796 221 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 HERV-K104P61576 105 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 TFAMQ00059 246 aaKnown RBP5.08□□□□□ -1.6
MRE11-209ENST00000540013 ZNF33AQ06730 810 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 PPIDQ08752 370 aaKnown RBP5.08□□□□□ -1.6
MRE11-209ENST00000540013 SMARCB1Q12824 385 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 EIF2B1Q14232 305 aaKnown RBP5.08□□□□□ -1.6
MRE11-209ENST00000540013 KIR2DS3Q14952 304 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 MLF2Q15773 248 aaPredicted RBP5.08□□□□□ -1.6
MRE11-209ENST00000540013 FAM106AQ4KMX7 169 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 C8orf82Q6P1X6 216 aaPredicted RBP5.08□□□□□ -1.6
MRE11-209ENST00000540013 CLEC18BQ6UXF7 455 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 TIPARPQ7Z3E1 657 aaKnown RBP5.08□□□□□ -1.6
MRE11-209ENST00000540013 ZNF100Q8IYN0 542 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 GPD1LQ8N335 351 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 METTL4Q8N3J2 472 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 IQCF1Q8N6M8 205 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 CLEC18CQ8NCF0 446 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 SPPL2BQ8TCT7 592 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 CAPSLQ8WWF8 208 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 ELSPBP1Q96BH3 223 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 CCDC126Q96EE4 140 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 SMIM10Q96HG1 83 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 ANKRD36BP1Q96IX9 119 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 SERPINB11Q96P15 392 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 SLC25A33Q9BSK2 321 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 METTL8Q9H825 291 aaKnown RBP5.08□□□□□ -1.6
MRE11-209ENST00000540013 ZNF224Q9NZL3 707 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 ZNF282Q9UDV7 671 aaPredicted RBP5.08□□□□□ -1.6
MRE11-209ENST00000540013 CLEC2DQ9UHP7 191 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 PDE10AQ9Y233 779 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 SLC17A4Q9Y2C5 497 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 TSSC4Q9Y5U2 329 aaPredicted RBP5.08□□□□□ -1.6
MRE11-209ENST00000540013 PTGDR2Q9Y5Y4 395 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 CNOT1A5YKK6 2376 aaKnown RBP5.08□□□□□ -1.6
MRE11-209ENST00000540013 PI4KAP42356 2102 aa5.08□□□□□ -1.6
MRE11-209ENST00000540013 USP34Q70CQ2 3546 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 A0A1B0GTI1 187 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 PVALEFA0A1B0GWK0 134 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 A0A1W2PRF3 423 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 A0A1W2PRM7 423 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 OR5H15A6NDH6 313 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 ZNF233A6NK53 670 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 INAFM1C9JVW0 142 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 SMLR1H3BR10 107 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.07□□□□□ -1.6
MRE11-209ENST00000540013 LIN7AO14910 233 aaPredicted RBP5.07□□□□□ -1.6
MRE11-209ENST00000540013 TFECO14948 347 aaPredicted RBP5.07□□□□□ -1.6
MRE11-209ENST00000540013 RPP14O95059 124 aaKnown RBP5.07□□□□□ -1.6
MRE11-209ENST00000540013 JCHAINP01591 159 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 KLK1P06870 262 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 RETP07949 1114 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 PGAM1P18669 254 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 NPR2P20594 1047 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 CASP1P29466 404 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 VHLP40337 213 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 ID1P41134 155 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 NBL1P41271 181 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 CDKN2CP42773 168 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 ZFP36L2P47974 494 aaKnown RBP5.07□□□□□ -1.6
MRE11-209ENST00000540013 TUFMP49411 452 aaKnown RBP5.07□□□□□ -1.6
MRE11-209ENST00000540013 THBS3P49746 956 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 GDI2P50395 445 aaKnown RBP5.07□□□□□ -1.6
MRE11-209ENST00000540013 ABCE1P61221 599 aaKnown RBP5.07□□□□□ -1.6
MRE11-209ENST00000540013 SNRPFP62306 86 aaKnown RBP5.07□□□□□ -1.6
MRE11-209ENST00000540013 Q0VFX4 171 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 CASP8Q14790 479 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 SLC17A1Q14916 467 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 TRAM2Q15035 370 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 TEAD2Q15562 447 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 TSC22D1Q15714 1073 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 UAP1Q16222 522 aaPredicted RBP5.07□□□□□ -1.6
MRE11-209ENST00000540013 TMEM52BQ4KMG9 183 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 FAM78AQ5JUQ0 283 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 RESP18Q5W5W9 173 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 SLC25A47Q6Q0C1 308 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 SPESP1Q6UW49 350 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 ZNF621Q6ZSS3 439 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 TSEN54Q7Z6J9 526 aaKnown RBP5.07□□□□□ -1.6
MRE11-209ENST00000540013 OR4N5Q8IXE1 308 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 TMEM86AQ8N2M4 240 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 PGBD5Q8N414 524 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 KIR3DL3Q8N743 410 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 LRRC52Q8N7C0 313 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 OR56A4Q8NGH8 313 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 C2orf15Q8WU43 125 aaKnown RBP5.07□□□□□ -1.6
MRE11-209ENST00000540013 PSMG2Q969U7 264 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 OMA1Q96E52 524 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 ZBED6CLQ96FA7 236 aaPredicted RBP5.07□□□□□ -1.6
MRE11-209ENST00000540013 PAPOLGQ9BWT3 736 aaKnown RBP5.07□□□□□ -1.6
MRE11-209ENST00000540013 PLA2G2FQ9BZM2 168 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 SYT4Q9H2B2 425 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 PIGUQ9H490 435 aa5.07□□□□□ -1.6
MRE11-209ENST00000540013 GLIPR2Q9H4G4 154 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms