RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 TAF11Q15544 211 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 ALG10Q5BKT4 473 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 COQ5Q5HYK3 327 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 FAM209AQ5JX71 171 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 THEM4Q5T1C6 240 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 FAM27BQ5VT28 67 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 ZNF101Q8IZC7 436 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 AKR7LQ8NHP1 331 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 RAB1CQ92928 201 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 ELMOD3Q96FG2 381 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 RBP7Q96R05 134 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 TMEM120AQ9BXJ8 343 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 PCDHB10Q9UN67 800 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 CACNG2Q9Y698 323 aa16.74■□□□□ 0.27
TNFRSF1B-204ENST00000536782 LOC100509620A0A075B734 347 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 A0A0G2JMP0 313 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 A0A0X1KG70 313 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 PLSCR5A0PG75 271 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 DEAF1O75398 565 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 RGS9O75916 674 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 EPHA1P21709 976 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 MPV17P39210 176 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 WNT5AP41221 380 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 ERVK-25P63136 954 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 PSG4Q00888 419 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 TOP3AQ13472 1001 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 SPATA46Q5T0L3 261 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 SLC25A47Q6Q0C1 308 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 C1orf229Q6ZS94 237 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 C1orf174Q8IYL3 243 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 OR4M2Q8NGB6 313 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 C10orf82Q8WW14 230 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 IPCEF1Q8WWN9 437 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 MARS2Q96GW9 593 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 ZNF583Q96ND8 569 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 ALG12Q9BV10 488 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 FGFR1OP2Q9NVK5 253 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 HIF3AQ9Y2N7 669 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 ARHGAP32A7KAX9 2087 aa16.73■□□□□ 0.27
TNFRSF1B-204ENST00000536782 LOC105371242A0A075B767 164 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 HTR3EA5X5Y0 456 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 BBIP1A8MTZ0 92 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 MRASO14807 208 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 SPRY3O43610 288 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 PIP5K1CO60331 668 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 AVPP01185 164 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 IGHV1-46P01743 117 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 IGHV2-5P01817 119 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 CFPP27918 469 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 IFNA8P32881 189 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 GUCA1AP43080 201 aaPredicted RBP16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 MMP15P51511 669 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 RPL27P61353 136 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 ACTG1P63261 375 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 ST3GAL3Q11203 375 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 LRRC23Q53EV4 343 aaPredicted RBP16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 CYBRD1Q53TN4 286 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 MBNL2Q5VZF2 373 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 USP43Q70EL4 1123 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 ALDH16A1Q8IZ83 802 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 SLC25A40Q8TBP6 338 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 FNDC8Q8TC99 324 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 KLF14Q8TD94 323 aaPredicted RBP16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 CCL17Q92583 94 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 BPIFA2Q96DR5 249 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 TPD52L3Q96J77 140 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 OR2H1Q9GZK4 316 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 OR2J1Q9GZK6 312 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 CYSLTR2Q9NS75 346 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 MGAM2Q2M2H8 2515 aa16.72■□□□□ 0.27
TNFRSF1B-204ENST00000536782 J3QLI3 93 aa16.71■□□□□ 0.27
TNFRSF1B-204ENST00000536782 CST2P09228 141 aa16.71■□□□□ 0.27
TNFRSF1B-204ENST00000536782 IFI30P13284 250 aa16.71■□□□□ 0.27
TNFRSF1B-204ENST00000536782 MAKP20794 623 aa16.71■□□□□ 0.27
TNFRSF1B-204ENST00000536782 LAP3P28838 519 aa16.71■□□□□ 0.27
TNFRSF1B-204ENST00000536782 KDELR2P33947 212 aa16.71■□□□□ 0.27
TNFRSF1B-204ENST00000536782 LIPAP38571 399 aa16.71■□□□□ 0.27
TNFRSF1B-204ENST00000536782 ARFIP2P53365 341 aa16.71■□□□□ 0.27
TNFRSF1B-204ENST00000536782 HILS1P60008 231 aa16.71■□□□□ 0.27
TNFRSF1B-204ENST00000536782 PCBD1P61457 104 aa16.71■□□□□ 0.27
TNFRSF1B-204ENST00000536782 GUCY1A3Q02108 690 aa16.71■□□□□ 0.27
TNFRSF1B-204ENST00000536782 ABHD4Q8TB40 342 aa16.71■□□□□ 0.27
TNFRSF1B-204ENST00000536782 PRRC1Q96M27 445 aa16.71■□□□□ 0.27
TNFRSF1B-204ENST00000536782 GAL3ST1Q99999 423 aa16.71■□□□□ 0.27
TNFRSF1B-204ENST00000536782 TMPRSS13Q9BYE2 586 aa16.71■□□□□ 0.27
TNFRSF1B-204ENST00000536782 EGLN1Q9GZT9 426 aa16.71■□□□□ 0.27
TNFRSF1B-204ENST00000536782 TIMM10BQ9Y5J6 103 aa16.71■□□□□ 0.27
TNFRSF1B-204ENST00000536782 FAM220BPB1ANY3 271 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 TRIM77I1YAP6 450 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 IGHMP01871 453 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 CTXN1P60606 82 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 PPP1CBP62140 327 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 SELENOWP63302 87 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 SLC3A1Q07837 685 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 KLF10Q13118 480 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 MAPRE2Q15555 327 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 TMEM255AQ5JRV8 349 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 DCAF12L2Q5VW00 463 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 FAM205BPQ63HN1 556 aa16.7■□□□□ 0.26
TNFRSF1B-204ENST00000536782 C1QL2Q7Z5L3 287 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms