RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 H1F0P07305 194 aaKnown RBP9.09□□□□□ -0.95
NELFE-213ENST00000494956 IGFBP5P24593 272 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 MPV17P39210 176 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 WNT5AP41221 380 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 OMPP47874 163 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 SRSF2Q01130 221 aaKnown RBP9.09□□□□□ -0.95
NELFE-213ENST00000494956 CCNIQ14094 377 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 ENDOGQ14249 297 aaKnown RBP9.09□□□□□ -0.95
NELFE-213ENST00000494956 TBC1D28Q2M2D7 210 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 ZBED5Q49AG3 693 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 HDDC2Q7Z4H3 204 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 RNF113BQ8IZP6 322 aaKnown RBP9.09□□□□□ -0.95
NELFE-213ENST00000494956 ZNF786Q8N393 782 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 POM121L2Q96KW2 1035 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 SNX18Q96RF0 628 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 ALG12Q9BV10 488 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 NSRP1Q9H0G5 558 aaKnown RBP9.09□□□□□ -0.95
NELFE-213ENST00000494956 TAAR3PQ9P1P4 343 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 RPS6KA6Q9UK32 745 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 SIGLEC7Q9Y286 467 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 TEX13CA0A0J9YWL9 993 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 LOC100289279A0A1B0GTE1 492 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 C5orf49A4QMS7 147 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 SOCS2O14508 198 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 LMX1BO60663 402 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 CDC14BO60729 498 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 PTP4A3O75365 173 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 MPZL1O95297 269 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 GPANK1O95872 356 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 NGFP01138 241 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 SEMG1P04279 462 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 CD14P08571 375 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 CTLA4P16410 223 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 ZNF23P17027 643 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 STOMP27105 288 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 APLNRP35414 380 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 LIMS1P48059 325 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 UCP2P55851 309 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 RPS23P62266 143 aaKnown RBP9.08□□□□□ -0.96
NELFE-213ENST00000494956 PLP2Q04941 152 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 RIN1Q13671 783 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 TAF11Q15544 211 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 CHRFAM7AQ494W8 412 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 THEM4Q5T1C6 240 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 FAM27BQ5VT28 67 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 ZNF774Q6NX45 483 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 TMPRSS11FQ6ZWK6 438 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 RRM2BQ7LG56 351 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 FAM122BQ7Z309 247 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 PIGWQ7Z7B1 504 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 CYP4Z1Q86W10 505 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 OR1J1Q8NGS3 322 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 RBP7Q96R05 134 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 CDRT15Q96T59 188 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 FUZQ9BT04 418 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 ZNF416Q9BWM5 594 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 OR2H1Q9GZK4 316 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 RERGLQ9H628 205 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 SMURF2Q9HAU4 748 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 MYOZ1Q9NP98 299 aaPredicted RBP9.08□□□□□ -0.96
NELFE-213ENST00000494956 STX18Q9P2W9 335 aaKnown RBP9.08□□□□□ -0.96
NELFE-213ENST00000494956 CD300AQ9UGN4 299 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 TAGLN3Q9UI15 199 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 FBXL3Q9UKT7 428 aa9.08□□□□□ -0.96
NELFE-213ENST00000494956 FAM32AQ9Y421 112 aaKnown RBP9.08□□□□□ -0.96
NELFE-213ENST00000494956 IGLV3-9A0A075B6K5 115 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 A0A1W2PRQ8 180 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 SLC22A23A1A5C7 686 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 A6NIZ1 184 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 NDUFAB1O14561 156 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 ARPC2O15144 300 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 ENTPD5O75356 428 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 SNAP29O95721 258 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 TGFAP01135 160 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 ERCC1P07992 297 aaPredicted RBP9.07□□□□□ -0.96
NELFE-213ENST00000494956 ZNF250P15622 560 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 RHCEP18577 417 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 GIFP27352 417 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 EVX1P49640 407 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 GZMKP49863 264 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 KLF3P57682 345 aaPredicted RBP9.07□□□□□ -0.96
NELFE-213ENST00000494956 RAP1BP61224 184 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 RAP1AP62834 184 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 CCL8P80075 99 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 SPIBQ01892 262 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 DGCR6Q14129 220 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 NKPD1Q17RQ9 610 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 NRN1LQ496H8 165 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 SPRNQ5BIV9 151 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 FOXL2NBQ6ZUU3 175 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 PTCHD4Q6ZW05 846 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 RFPL4BQ6ZWI9 263 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 DPPA2Q7Z7J5 298 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 DEFB107AQ8IZN7 70 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 PGAM4Q8N0Y7 254 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 OR1J2Q8NGS2 313 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 SYNPRQ8TBG9 265 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 SLC25A40Q8TBP6 338 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 SLC7A6Q92536 515 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 PYURFQ96I23 114 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms