RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 S100A14Q9HCY8 104 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 MYOZ1Q9NP98 299 aaPredicted RBP4.43□□□□□ -1.7
HDAC6-223ENST00000480525 POLE4Q9NR33 117 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 PAPOLBQ9NRJ5 636 aaKnown RBP4.43□□□□□ -1.7
HDAC6-223ENST00000480525 DDX28Q9NUL7 540 aaKnown RBP4.43□□□□□ -1.7
HDAC6-223ENST00000480525 TBC1D23Q9NUY8 699 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF701Q9NV72 531 aaPredicted RBP4.43□□□□□ -1.7
HDAC6-223ENST00000480525 TBCCD1Q9NVR7 557 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 VNN3Q9NY84 501 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 NPAP1Q9NZP6 1156 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 PDP1Q9P0J1 537 aaPredicted RBP4.43□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF391Q9UJN7 358 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 ADAM18Q9Y3Q7 739 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 SPEF1Q9Y4P9 236 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 TIMM10BQ9Y5J6 103 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 USF3Q68DE3 2245 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 TANC2Q9HCD6 1990 aa4.43□□□□□ -1.7
HDAC6-223ENST00000480525 OTOGQ6ZRI0 2925 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 ITPR3Q14573 2671 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 CSMD2Q7Z408 3487 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 IGLV3-9A0A075B6K5 115 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 IGHV1-18A0A0C4DH31 117 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 A0A1B0GWJ7 208 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 OR6C6A6NF89 314 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 DPRXA6NFQ7 191 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 SURF4O15260 269 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 SLC16A6O15403 523 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 ARHGEF9O43307 516 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 TIPRLO75663 272 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 FSTL3O95633 263 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 PPP1R3DO95685 299 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 RAB36O95755 333 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 RPSAP08865 295 aaKnown RBP4.42□□□□□ -1.7
HDAC6-223ENST00000480525 B4GALT1P15291 398 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 HIST1H1CP16403 213 aaKnown RBP4.42□□□□□ -1.7
HDAC6-223ENST00000480525 CTLA4P16410 223 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF23P17027 643 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 SLC2A5P22732 501 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 NR4A1P22736 598 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 IGFBP5P24593 272 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 GLRXP35754 106 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 LIPAP38571 399 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 CDKN2AP42771 156 aaKnown RBP4.42□□□□□ -1.7
HDAC6-223ENST00000480525 RAD52P43351 418 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 PPOXP50336 477 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 DAPP51397 102 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 NUDT6P53370 316 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 CRISP1P54107 249 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 RAB1AP62820 205 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 ERVK-25P63136 954 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 MRPS11P82912 194 aaKnown RBP4.42□□□□□ -1.7
HDAC6-223ENST00000480525 MYBPC1Q00872 1141 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 IL1RL1Q01638 556 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 NAAAQ02083 359 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 PLP2Q04941 152 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 BSPH1Q075Z2 132 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.42□□□□□ -1.7
HDAC6-223ENST00000480525 LGALS3BPQ08380 585 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 POU4F2Q12837 409 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 IL18R1Q13478 541 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 DAG1Q14118 895 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 KPNB1Q14974 876 aaKnown RBP4.42□□□□□ -1.7
HDAC6-223ENST00000480525 RAB35Q15286 201 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 MOGQ16653 247 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 PHYHD1Q5SRE7 291 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 LINC01590Q5TEZ4 76 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 MEDAGQ5VYS4 303 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 NXNL2Q5VZ03 156 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 C12orf73Q69YU5 71 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF787Q6DD87 383 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 ARL9Q6T311 187 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 COLCA1Q6ZS62 124 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 PTCHD4Q6ZW05 846 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 SLC16A14Q7RTX9 510 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 TMEM179BQ7Z7N9 219 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 OR6V1Q8N148 313 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF454Q8N9F8 522 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 ATG16L2Q8NAA4 619 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 OR8D4Q8NGM9 314 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 LINC01560Q8TB33 94 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 HAVCR2Q8TDQ0 301 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 STMN2Q93045 179 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF837Q96EG3 531 aaPredicted RBP4.42□□□□□ -1.7
HDAC6-223ENST00000480525 PLPPR2Q96GM1 343 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 SAMD8Q96LT4 415 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 ERMAPQ96PL5 475 aaPredicted RBP4.42□□□□□ -1.7
HDAC6-223ENST00000480525 PITX2Q99697 317 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 NIPSNAP1Q9BPW8 284 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 DHRS9Q9BPW9 319 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 TSSK6Q9BXA6 273 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 PLA2G12AQ9BZM1 189 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 NUAK2Q9H093 628 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 SYT4Q9H2B2 425 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 TOR3AQ9H497 397 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 BARX1Q9HBU1 254 aaPredicted RBP4.42□□□□□ -1.7
HDAC6-223ENST00000480525 KRT84Q9NSB2 600 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 NKIRAS2Q9NYR9 191 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 CYB5R1Q9UHQ9 305 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 TMEFF2Q9UIK5 374 aaPredicted RBP4.42□□□□□ -1.7
HDAC6-223ENST00000480525 ST6GALNAC2Q9UJ37 374 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms