RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 TMEM9Q9P0T7 183 aa3.19□□□□□ -1.9
SOX2-OT-207ENST00000476964 STOX2Q9P2F5 926 aaPredicted RBP3.19□□□□□ -1.9
SOX2-OT-207ENST00000476964 CELA1Q9UNI1 258 aa3.19□□□□□ -1.9
SOX2-OT-207ENST00000476964 BZW2Q9Y6E2 419 aaKnown RBP3.19□□□□□ -1.9
SOX2-OT-207ENST00000476964 COL16A1Q07092 1604 aaPredicted RBP3.19□□□□□ -1.9
SOX2-OT-207ENST00000476964 CIB4A0PJX0 185 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 LYRM9A8MSI8 78 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 HIDE1A8MVS5 230 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 NDUFS8O00217 210 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 HSBP1O75506 76 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 LSM8O95777 96 aaKnown RBP3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 NR2C1P13056 603 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 DEKP35659 375 aaKnown RBP3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 GPR1P46091 355 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 CCR8P51685 355 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 STX17P56962 302 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 SP4Q02446 784 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 IFT88Q13099 833 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 GGTLC2Q14390 218 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 HERPUD1Q15011 391 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 STK38Q15208 465 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 TRMT5Q32P41 509 aaKnown RBP3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 HNRNPA1L2Q32P51 320 aaKnown RBP3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 ZNF829Q3KNS6 432 aaPredicted RBP3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 LRRC10Q5BKY1 277 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 C9orf129Q5T035 196 aaKnown RBP3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 CCNJQ5T5M9 372 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 CTRB2Q6GPI1 263 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 C12orf54Q6X4T0 127 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 SCARA5Q6ZMJ2 495 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 MRPL21Q7Z2W9 205 aaKnown RBP3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 TGIF2LYQ8IUE0 185 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 ZNF547Q8IVP9 402 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 MYOCDQ8IZQ8 938 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 ACER1Q8TDN7 264 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 RAB1CQ92928 201 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 IL22RA2Q969J5 263 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 DNAJC1Q96KC8 554 aaKnown RBP3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 B3GALT6Q96L58 329 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 C9orf72Q96LT7 481 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 CSPG4P5Q96PW8 444 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 PLEKHF1Q96S99 279 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 SH3GL3Q99963 347 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 RASL11BQ9BPW5 248 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 GABARAPL3Q9BY60 117 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 DEFB127Q9H1M4 99 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 CCL28Q9NRJ3 127 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 ABCB10Q9NRK6 738 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 IFNKQ9P0W0 207 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 RCL1Q9Y2P8 373 aaKnown RBP3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 SAR1BQ9Y6B6 198 aa3.18□□□□□ -1.9
SOX2-OT-207ENST00000476964 NEURL4Q96JN8 1562 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 A0A0B4J2A0 478 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 A0A1B0GUH1 482 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 PRSS37A4D1T9 235 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 H7C0C1 242 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 PLPP1O14494 284 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 ZBTB5O15062 677 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 SCAMP2O15127 329 aaKnown RBP3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 NVLO15381 856 aaKnown RBP3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 NUPL2O15504 423 aaKnown RBP3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 FARS2O95363 451 aaKnown RBP3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 CTRB1P17538 263 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 PMCHP20382 165 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 CNR1P21554 472 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 LONP1P36776 959 aaKnown RBP3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 SLC26A3P40879 764 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 RFC3P40938 356 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 NBL1P41271 181 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 TNFSF9P41273 254 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 CAV2P51636 162 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 CLDN18P56856 261 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 LYZP61626 148 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 RPS21P63220 83 aaKnown RBP3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 LCN2P80188 198 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 XIAPP98170 497 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 ZNF33AQ06730 810 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 ORC2Q13416 577 aaPredicted RBP3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 NCF4Q15080 339 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 GABRA6Q16445 453 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 FBXO48Q5FWF7 155 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 ZNF544Q6NX49 715 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 H3F3CQ6NXT2 135 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 ULK3Q6PHR2 472 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 FAM122BQ7Z309 247 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 PEX26Q7Z412 305 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 TMEM150AQ86TG1 271 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 OAFQ86UD1 273 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 TRAM1L1Q8N609 369 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 ZFP41Q8N8Y5 198 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 ASCC1Q8N9N2 400 aaKnown RBP3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 FBXO36Q8NEA4 188 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 OR4F15Q8NGB8 312 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 OR4A15Q8NGL6 344 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 OR2G3Q8NGZ4 309 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 NEIL3Q8TAT5 605 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 CD300LFQ8TDQ1 290 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 GIMAP1Q8WWP7 306 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 NAT6Q93015 286 aa3.17□□□□□ -1.9
SOX2-OT-207ENST00000476964 ECSITQ9BQ95 431 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms