RNA–Protein interactions for RNA: ENST00000469003.5

CCDC28B-204, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 2

Gene CCDC28B, Length 1,235 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-204ENST00000469003 MAKP20794 623 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 FUT4P22083 530 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 WNT5AP41221 380 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 CRYBB2P43320 205 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 YAP1P46937 504 aaKnown RBP14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 GDI2P50395 445 aaKnown RBP14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 LMO4P61968 165 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 ERVK-25P63136 954 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 PSG4Q00888 419 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 PRKCDQ05655 676 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 TRAM2Q15035 370 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 ZNF718Q3SXZ3 478 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 ANKDD1AQ495B1 522 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 UNQ6126/PRO20091Q6UXV3 157 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 FOXL2NBQ6ZUU3 175 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 VTCN1Q7Z7D3 282 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 NRMQ8IXM6 262 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 SLC15A3Q8IY34 581 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 RP9Q8TA86 221 aaKnown RBP14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 CCDC134Q9H6E4 229 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 HIF1ANQ9NWT6 349 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 ARMCX1Q9P291 453 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 GMPR2Q9P2T1 348 aaKnown RBP14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 EIF3KQ9UBQ5 218 aaKnown RBP14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 GRIP1Q9Y3R0 1128 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 SNX13Q9Y5W8 968 aa14.13□□□□□ -0.15
CCDC28B-204ENST00000469003 TRAV27A0A087WT01 109 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 IGHV1-69-2A0A0G2JMI3 117 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 C5orf49A4QMS7 147 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 A6NIZ1 184 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 J3KTA2 159 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 CST2P09228 141 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 LAP3P28838 519 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 GCH1P30793 250 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 GUCA1AP43080 201 aaPredicted RBP14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 SLC9A3P48764 834 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 RAP1BP61224 184 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 RAP1AP62834 184 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 GUCY1A3Q02108 690 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 GLO1Q04760 184 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 FHL1Q13642 323 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 OAFQ86UD1 273 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 IGFN1Q86VF2 1251 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 C1orf174Q8IYL3 243 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 ZNF101Q8IZC7 436 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 RNF113BQ8IZP6 322 aaKnown RBP14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 CLDN22Q8N7P3 220 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 OR51F2Q8NH61 342 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 OR51A7Q8NH64 312 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 GEMIN6Q8WXD5 167 aaKnown RBP14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 GTF3AQ92664 365 aaKnown RBP14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 MARS2Q96GW9 593 aaKnown RBP14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 OR2H1Q9GZK4 316 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 WNT5BQ9H1J7 359 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 LPAR2Q9HBW0 351 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 DECR2Q9NUI1 292 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 RHCGQ9UBD6 479 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 METRNQ9UJH8 293 aa14.12□□□□□ -0.15
CCDC28B-204ENST00000469003 EFCAB9A8MZ26 197 aa14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 CXCR6O00574 342 aa14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 FFAR1O14842 300 aa14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 TPD52L2O43399 206 aaKnown RBP14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 ZNF81P51508 661 aa14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 PCBD1P61457 104 aa14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 LIPEQ05469 1076 aa14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 TSTQ16762 297 aaKnown RBP14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 IFI44LQ53G44 452 aa14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 FAM209AQ5JX71 171 aa14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 SPATA46Q5T0L3 261 aa14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 MBNL2Q5VZF2 373 aaKnown RBP14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 USP51Q70EK9 711 aa14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 CBLL1Q75N03 491 aa14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 MEX3DQ86XN8 651 aaKnown RBP14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 ALDH16A1Q8IZ83 802 aa14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 SLC25A40Q8TBP6 338 aa14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 IPCEF1Q8WWN9 437 aaPredicted RBP14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 ACOT11Q8WXI4 607 aaPredicted RBP14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 LRRC37BQ96QE4 947 aa14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 SAP30LQ9HAJ7 183 aa14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 TIMM10BQ9Y5J6 103 aa14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 ANK2Q01484 3957 aa14.11□□□□□ -0.15
CCDC28B-204ENST00000469003 A0A087WUU8 490 aa14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 TRAV20A0A0B4J274 112 aa14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 A0A1W2PPL8 197 aa14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 H3BSA7 217 aa14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 NME4O00746 187 aa14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 GSTA4O15217 222 aa14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 ICMTO60725 284 aa14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 PRSS23O95084 383 aa14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 ZNF682O95780 498 aa14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 COX4I1P13073 169 aa14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 ANPEPP15144 967 aa14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 ITGA2P17301 1181 aa14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 MSR1P21757 451 aa14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 MPV17P39210 176 aa14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 MMP15P51511 669 aa14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 MVKQ03426 396 aa14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 ENDOGQ14249 297 aaKnown RBP14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 TMEM255AQ5JRV8 349 aa14.1□□□□□ -0.15
CCDC28B-204ENST00000469003 AVPI1Q5T686 147 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms