RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 SERPINB9P50453 376 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 AQP5P55064 265 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 PSPHP78330 225 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 CSNK1G2P78368 415 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 MS4A2Q01362 244 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 PRDX1Q06830 199 aaKnown RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 SLC3A1Q07837 685 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 MAB21L1Q13394 359 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ASAH1Q13510 395 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 CEACAM7Q14002 265 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ACKR1Q16570 336 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 GUCA2BQ16661 112 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 UGT3A2Q3SY77 523 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF404Q494X3 552 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 CYBRD1Q53TN4 286 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ARMCX4Q5H9R4 360 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 TECRLQ5HYJ1 363 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 PRAMEF5Q5TYX0 476 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 PRAMEF6Q5VXH4 476 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ADNP2Q6IQ32 1131 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 CAPN13Q6MZZ7 669 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 SHISA6Q6ZSJ9 500 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 TTLL10Q6ZVT0 673 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 RPS27LQ71UM5 84 aaKnown RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 PGAP1Q75T13 922 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 MEPCEQ7L2J0 689 aaKnown RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 PRSS41Q7RTY9 318 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 FAM122BQ7Z309 247 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 C16orf62Q7Z3J2 963 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 VN1R4Q7Z5H5 301 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 HSD17B13Q7Z5P4 300 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ISCA2Q86U28 154 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 THOC6Q86W42 341 aaKnown RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ANKRD46Q86W74 232 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 C17orf64Q86WR6 236 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 KLBQ86Z14 1044 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 SNX29P2Q8IUI4 249 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 STHQ8IWL8 128 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 GPR135Q8IZ08 494 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 STPG2Q8N412 459 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 SVOPLQ8N434 492 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 CSNK1A1LQ8N752 337 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 TMEM217Q8N7C4 229 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 YIPF7Q8N8F6 280 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 EXD3Q8N9H8 876 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 PAPD5Q8NDF8 572 aaKnown RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF740Q8NDX6 193 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 GJC3Q8NFK1 279 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 OR13C3Q8NGS6 347 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 RP9Q8TA86 221 aaKnown RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 OSTF1Q92882 214 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 RFKQ969G6 155 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 NEIL2Q969S2 332 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 MOCOSQ96EN8 888 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 FAM71F1Q96KD3 344 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 FRG2BQ96QU4 278 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 OR1F2PQ96R84 312 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 PANX1Q96RD7 426 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 RASL10BQ96S79 203 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 CCNL2Q96S94 520 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ATOH8Q96SQ7 321 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 SDHCQ99643 169 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 GPR87Q9BY21 358 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 AMBRA1Q9C0C7 1298 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ILKAPQ9H0C8 392 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 SLC26A1Q9H2B4 701 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ANKRD19PQ9H560 264 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF385DQ9H6B1 395 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 IL1RAPQ9NPH3 570 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 LHX9Q9NQ69 397 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 PRDM7Q9NQW5 492 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ABCB10Q9NRK6 738 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 TMEM181Q9P2C4 612 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ONECUT1Q9UBC0 465 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 OPTCQ9UBM4 332 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 PEF1Q9UBV8 284 aaKnown RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 COPS7AQ9UBW8 275 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 MIOXQ9UGB7 285 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 TBC1D24Q9ULP9 559 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 MGAT4AQ9UM21 535 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 BAIAP2Q9UQB8 552 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 SLC22A14Q9Y267 594 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 PEX16Q9Y5Y5 336 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ANKRD12Q6UB98 2062 aa4.09□□□□□ -1.76
SF3B1-202ENST00000409915 BOD1L1Q8NFC6 3051 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 FER1L5A0AVI2 2057 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 TMEM129A0AVI4 362 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 CIB4A0PJX0 185 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 ZNF860A6NHJ4 632 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 OR6C70A6NIJ9 312 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 ZNF99A8MXY4 864 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-202ENST00000409915 C4orf51C9J302 202 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 FAM157AC9JC47 383 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 SOCS2O14508 198 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 SUV39H1O43463 412 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 RNF13O43567 381 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 PLPP2O43688 288 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 LCMT2O60294 686 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms