RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SULT1B1O43704 296 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 ORC5O43913 435 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 PRB1P04280 392 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 SPARCP09486 303 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 COX6A1P12074 109 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 IMPDH2P12268 514 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 SNRPBP14678 240 aaKnown RBP9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 ZNF823P16415 610 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 ZNF28P17035 718 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 CFPP27918 469 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 RIDAP52758 137 aaKnown RBP9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 BTG1P62324 171 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 MRPS10P82664 201 aaKnown RBP9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 EIF2B1Q14232 305 aaKnown RBP9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 CARTPTQ16568 116 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 ZNF239Q16600 458 aaKnown RBP9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 MEP1BQ16820 701 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 DEGS2Q6QHC5 323 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 KRT77Q7Z794 578 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 OR4K17Q8NGC6 315 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 OR2Y1Q8NGV0 311 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 OR6F1Q8NGZ6 308 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 OR52N5Q8NH56 324 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 POC1BQ8TC44 478 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 LGALS14Q8TCE9 139 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 HSD17B8Q92506 261 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 ARL5BQ96KC2 179 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 IMMP1LQ96LU5 166 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 MARVELD1Q9BSK0 173 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 ULBP3Q9BZM4 244 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 TSPAN10Q9H1Z9 355 aaPredicted RBP9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 ABCG5Q9H222 651 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 ELOVL3Q9HB03 270 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 SLC39A1Q9NY26 324 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 KLHL9Q9P2J3 617 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 HDGFL3Q9Y3E1 203 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 PTRH2Q9Y3E5 179 aaKnown RBP9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 CFAP46Q8IYW2 2715 aa9.39□□□□□ -0.91
POLR2J3-201ENST00000379340 TENM4Q6N022 2769 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 C2orf72A6NCS6 295 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 AGRPO00253 132 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 TFECO14948 347 aaPredicted RBP9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 UMODP07911 640 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 PSKH1P11801 424 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 IFNGR1P15260 489 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 DPP4P27487 766 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 MNDAP41218 407 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 FOLR3P41439 243 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 GPR85P60893 370 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 POU3F1Q03052 451 aaPredicted RBP9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 MADCAM1Q13477 382 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 PCK2Q16822 640 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 WDR38Q5JTN6 314 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 DBX2Q6ZNG2 339 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 PRSS35Q8N3Z0 413 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 SLC26A10Q8NG04 563 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 DNAJA3Q96EY1 480 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 GFI1Q99684 422 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 ZPBPQ9BS86 351 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 SLC25A18Q9H1K4 315 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 COPZ2Q9P299 210 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 KLHL13Q9P2N7 655 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 COA3Q9Y2R0 106 aaPredicted RBP9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 RAXQ9Y2V3 346 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 CACNG2Q9Y698 323 aa9.38□□□□□ -0.91
POLR2J3-201ENST00000379340 ANXA2P2A6NMY6 339 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 EEF1E1O43324 174 aaKnown RBP9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 KLF7O75840 302 aaPredicted RBP9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 ANXA2P07355 339 aaKnown RBP9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 NR2C1P13056 603 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 CCL4P13236 92 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 HLA-DOBP13765 273 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 IL11P20809 199 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 SLC6A1P30531 599 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 KIR3DL2P43630 455 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 SSR4P51571 173 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 MYBPHQ13203 477 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 DYRK1AQ13627 763 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 GPR176Q14439 515 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 HES5Q5TA89 166 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 LRRC69Q6ZNQ3 347 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 NDUFAF7Q7L592 441 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 SYT9Q86SS6 491 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 LRRTM1Q86UE6 522 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 CDH24Q86UP0 819 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 ZNF227Q86WZ6 799 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 CATSPERDQ86XM0 798 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 UEVLDQ8IX04 471 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 ARMC10Q8N2F6 343 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 TOMM5Q8N4H5 51 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 ZNF433Q8N7K0 673 aaPredicted RBP9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 SMIM4Q8WVI0 70 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 TSEN15Q8WW01 171 aaKnown RBP9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 SLC7A6Q92536 515 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 YIPF5Q969M3 257 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 MCHR2Q969V1 340 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 TMEM106AQ96A25 262 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 RBP7Q96R05 134 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 ABHD1Q96SE0 405 aa9.37□□□□□ -0.91
POLR2J3-201ENST00000379340 AMELYQ99218 206 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms