RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 TIFABQ6ZNK6 161 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 CREB3L2Q70SY1 520 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 SNX20Q7Z614 316 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 SMIM29Q86T20 159 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 M1APQ8TC57 530 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 BAALCQ8WXS3 180 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 TMEM18Q96B42 140 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 MEIS3Q99687 375 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 PITX2Q99697 317 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 KIR2DL4Q99706 377 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 PYGO2Q9BRQ0 406 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 AGMATQ9BSE5 352 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 GTPBP2Q9BX10 602 aaKnown RBP1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 OR2B2Q9GZK3 357 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 SLC25A19Q9HC21 320 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 MED17Q9NVC6 651 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 IKZF2Q9UKS7 526 aa1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 ZNF490Q9ULM2 529 aaPredicted RBP1.49□□□□□ -2.17
SMARCAD1-202ENST00000359052 TMEM189-UBE2V1I3L0A0 370 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 CLDN5O00501 218 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 SIVA1O15304 175 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 SULT1B1O43704 296 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 LCKP06239 509 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 RPSAP08865 295 aaKnown RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 OR8U8P0C7N1 319 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 ENO3P13929 434 aaPredicted RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 ATP1B2P14415 290 aaPredicted RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 ZNF250P15622 560 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 IGFBP3P17936 291 aaPredicted RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 BGNP21810 368 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 CBLP22681 906 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 SLC9A3P48764 834 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 NDUFA8P51970 172 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 AQP5P55064 265 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 DAZAP2Q15038 168 aaPredicted RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 ZNF726P1Q15940 193 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 UBE2UQ5VVX9 321 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 KMT5CQ86Y97 462 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 C20orf196Q8IYI0 205 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 ST13P4Q8IZP2 240 aaPredicted RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 STPG2Q8N412 459 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 THAP8Q8NA92 274 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 FANK1Q8TC84 345 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 APH1BQ8WW43 257 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 ZFYVE19Q96K21 471 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 SERPINB12Q96P63 405 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 RASL11BQ9BPW5 248 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 GGACTQ9BVM4 153 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 MRPS26Q9BYN8 205 aaKnown RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 DRC3Q9H069 523 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 PORCNQ9H237 461 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 ARV1Q9H2C2 271 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 SPNS1Q9H2V7 528 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 UGT1A7Q9HAW7 530 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 NXT1Q9UKK6 140 aaKnown RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 NDUFAF1Q9Y375 327 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 PRELID3BQ9Y3B1 194 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 TANC2Q9HCD6 1990 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 COL7A1Q02388 2944 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 IGLV5-52A0A0A0MRZ9 124 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 CCSO14618 274 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 NPIPB7O75200 414 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 RAP2AP10114 183 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 NCK1P16333 377 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 HLA-GP17693 338 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 ETV5P41161 510 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 XCR1P46094 333 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 OR1D4P47884 311 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 PCP4P48539 62 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 EVX1P49640 407 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 KLC1Q07866 573 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 ASAH1Q13510 395 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 HAGHQ16775 308 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 C12orf45Q8N5I9 185 aaPredicted RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 FAM71E2Q8N5Q1 922 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 C1orf52Q8N6N3 182 aaKnown RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 ZNF676Q8N7Q3 588 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 ASCC1Q8N9N2 400 aaKnown RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 ZNF740Q8NDX6 193 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 FAM83FQ8NEG4 500 aaPredicted RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 OR4F6Q8NGB9 312 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 LCN9Q8WX39 176 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 SRSF12Q8WXF0 261 aaKnown RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 MRPS24Q96EL2 167 aaKnown RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 THOC3Q96J01 351 aaKnown RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 LPAR4Q99677 370 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 TRIM62Q9BVG3 475 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 C12orf65Q9H3J6 166 aaKnown RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 TRABDQ9H4I3 376 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 ABCB10Q9NRK6 738 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 TMEM161AQ9NX61 479 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 ARPP21Q9UBL0 812 aaPredicted RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 PHF3Q92576 2039 aaKnown RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 TRBV6-7A0A0A0MS04 114 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 LY6G6EA0A0G2JKS1 128 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 A0A1W2PP18 115 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 METTL15A6NJ78 407 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 PRR23D1E9PI22 279 aaPredicted RBP1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 H3BSA7 217 aa1.48□□□□□ -2.17
SMARCAD1-202ENST00000359052 GYG2O15488 501 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms