RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 SERPINE3A8MV23 424 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 AKR1C1Q04828 323 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 INCA1Q0VD86 236 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 GGTA1PQ4G0N0 100 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 SLC22A6Q4U2R8 563 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 SFRP4Q6FHJ7 346 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-201ENST00000297405 NADSYN1Q6IA69 706 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 NEIL1Q96FI4 390 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-201ENST00000297405 OR2J1Q9GZK6 312 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 FBRSQ9HAH7 460 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 GPRC5CQ9NQ84 441 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 FKBP11Q9NYL4 201 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 A0A1W2PPH5 198 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 CXCL11O14625 94 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 CLIC3O95833 236 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 CAPNS1P04632 268 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 ADARB1P78563 741 aaKnown RBP4.48□□□□□ -1.69
CSMD3-201ENST00000297405 Q6ZTK2 550 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 OR14A16Q8NHC5 309 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 TMEM174Q8WUU8 243 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 SMPDL3BQ92485 455 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 SMIM19Q96E16 107 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 LCORQ96JN0 433 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-201ENST00000297405 NLRC5Q86WI3 1866 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 SPATA31A1Q5TZJ5 1347 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 SMIM35A0A1B0GVV1 85 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 OR7C2O60412 319 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 FAM155BO75949 473 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 ATP1B2P14415 290 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-201ENST00000297405 FCER1GP30273 86 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 HOXD11P31277 338 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-201ENST00000297405 BEX3Q00994 111 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 SLC25A11Q02978 314 aaKnown RBP4.48□□□□□ -1.69
CSMD3-201ENST00000297405 OR8G1Q15617 311 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 OTOP2Q7RTS6 562 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 TMEM156Q8N614 296 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 CDRT4Q8N9R6 151 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 NUDCD2Q8WVJ2 157 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 HAS1Q92839 578 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 DTD2Q96FN9 168 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 SIGLEC10Q96LC7 697 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 SAP30LQ9HAJ7 183 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 ZNF354AO60765 605 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-201ENST00000297405 PPP1R11O60927 126 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-201ENST00000297405 OR13C7P0DN81 318 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 CTSAP10619 480 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 PTGER4P35408 488 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 PREPP48147 710 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 PPOXP50336 477 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 GTF2A2P52657 109 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 EMP2P54851 167 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 SHC2P98077 582 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 COMMD6Q7Z4G1 85 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 OR52B6Q8NGF0 335 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 OR13C6PQ8NH95 151 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 CREB3L4Q8TEY5 395 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 ISL2Q96A47 359 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 TOE1Q96GM8 510 aaKnown RBP4.48□□□□□ -1.69
CSMD3-201ENST00000297405 P4HTMQ9NXG6 502 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 NAT8Q9UHE5 227 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 MED1Q15648 1581 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-201ENST00000297405 POM121CA8CG34 1229 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 GLSO94925 669 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-201ENST00000297405 SLC6A11P48066 632 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 B3GNT8Q7Z7M8 397 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 VSIG10LQ86VR7 867 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 ZC3H3Q8IXZ2 948 aaKnown RBP4.48□□□□□ -1.69
CSMD3-201ENST00000297405 SDR9C7Q8NEX9 313 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 KHSRPQ92945 711 aaKnown RBP eCLIP4.48□□□□□ -1.69
CSMD3-201ENST00000297405 TBX5Q99593 518 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 TTPALQ9BTX7 342 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 ARL2-SNX15V9GYD0 113 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 A0A1B0GVG6 124 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 NME4O00746 187 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 TNFSF12O43508 249 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 HOXA11P31270 313 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-201ENST00000297405 GALR1P47211 349 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 PARM1Q6UWI2 310 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 CLEC10AQ8IUN9 316 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 OR2M7Q8NG81 312 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 OR13G1Q8NGZ3 307 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 OR4F5Q8NH21 305 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 OR2A14Q96R47 310 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 OR4F4Q96R69 305 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 RAB40CQ96S21 281 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 SERINC2Q96SA4 455 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 GINS3Q9BRX5 216 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 PECRQ9BY49 303 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 GABARAPL3Q9BY60 117 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 PARD6GQ9BYG4 376 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-201ENST00000297405 ACSS2Q9NR19 701 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 NDRG2Q9UN36 371 aaKnown RBP4.48□□□□□ -1.69
CSMD3-201ENST00000297405 CSAG2Q9Y5P2 127 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 CRYBG1Q9Y4K1 1723 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 LMX1BO60663 402 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 ENDOD1O94919 500 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 AMHP03971 560 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 HLA-DQB2P05538 268 aa4.48□□□□□ -1.69
CSMD3-201ENST00000297405 THPOP40225 353 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms