RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 S100A16Q96FQ6 103 aaKnown RBP11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 ST6GAL2Q96JF0 529 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 RBP7Q96R05 134 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 OR5B2Q96R09 309 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 TMEM185BQ9H7F4 350 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 KLHL9Q9P2J3 617 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 OR5V1Q9UGF6 321 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 ETV7Q9Y603 341 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 ALG5Q9Y673 324 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 VCANP13611 3396 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 TRAV8-7A0A075B6U6 113 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 A0A087WZY1 265 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 INMT-MINDY4F8WBC2 141 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 HRGP04196 525 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 CD3GP09693 182 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 MPLP40238 635 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 SRP9P49458 86 aaKnown RBP11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 CLDN12P56749 244 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 SCAND1P57086 179 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 PCK2Q16822 640 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 DCAF12Q5T6F0 453 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 HDDC2Q7Z4H3 204 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 CATSPERDQ86XM0 798 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 PLCZ1Q86YW0 608 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 GLB1L2Q8IW92 636 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 WDFY1Q8IWB7 410 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 IZUMO1Q8IYV9 350 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 OR11G2Q8NGC1 345 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 SMIM4Q8WVI0 70 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 CDCP1Q9H5V8 836 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 NEK6Q9HC98 313 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 DDX28Q9NUL7 540 aaKnown RBP11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 B3GAT1Q9P2W7 334 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 NUFIP1Q9UHK0 495 aaKnown RBP11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 POU2F3Q9UKI9 436 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 SLC22A13Q9Y226 551 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 HDGFL3Q9Y3E1 203 aa11.57□□□□□ -0.56
SPTLC1-201ENST00000262554 KIF26BQ2KJY2 2108 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 A0A1W2PNR3 127 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 TMEM221A6NGB7 291 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 H3BSH0 61 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 M0R296 226 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 PNPP00491 289 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 OPN1LWP04000 364 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 NKX2-5P52952 324 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 ART1P52961 327 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 CLRN1P58418 232 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 BTG1P62324 171 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 MFGE8Q08431 387 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 C19orf57Q0VDD7 668 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 ZFP69Q49AA0 526 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 PLA1AQ53H76 456 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 THEM4Q5T1C6 240 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 TMEM225Q6GV28 225 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 TCEAL6Q6IPX3 200 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 DEGS2Q6QHC5 323 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 LINGO2Q7L985 606 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 DCXRQ7Z4W1 244 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 DNAAF1Q8NEP3 725 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 OR10H5Q8NGA6 315 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 SYNPRQ8TBG9 265 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 TCEAL3Q969E4 200 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 MIB2Q96AX9 1013 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 NECAB3Q96P71 396 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 C7orf50Q9BRJ6 194 aaKnown RBP11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 EMC6Q9BV81 110 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 ANGPTL4Q9BY76 406 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 ARRDC1-AS1Q9H2J1 176 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 ZNF160Q9HCG1 818 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 KLHL13Q9P2N7 655 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 PISDQ9UG56 409 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 DHDHQ9UQ10 334 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 R4GMQ9 66 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 CACNA1CQ13936 2221 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 SPEGQ15772 3267 aa11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 COL27A1Q8IZC6 1860 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1-201ENST00000262554 IGKV1D-43A0A0B4J1Z2 117 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 A8MV72 311 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 SULT1B1O43704 296 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 WNT11O96014 354 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 CD2P06729 351 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 ADRB1P08588 477 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 SFTPDP35247 375 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 AGFG1P52594 562 aaKnown RBP11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 ZNF528Q3MIS6 628 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 TMEM176BQ3YBM2 270 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 NHLRC1Q6VVB1 395 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 DBX2Q6ZNG2 339 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 PRSS45Q7RTY3 260 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 MDGA2Q7Z553 956 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 GPAT4Q86UL3 456 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 RPS19BP1Q86WX3 136 aaKnown RBP11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 LINC00346Q8IVM7 164 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 SIAH3Q8IW03 269 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 TMEM156Q8N614 296 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 ZBTB44Q8NCP5 570 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 ST7LQ8TDW4 575 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 C15orf40Q8WUR7 153 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms