RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 MMP7P09237 267 aaPredicted RBP12.33□□□□□ -0.44
VPS25-201ENST00000253794 CLUP10909 449 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 EPXP11678 715 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 HOXC12P31275 282 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 CDAP32320 146 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 GUCA1AP43080 201 aaPredicted RBP12.33□□□□□ -0.44
VPS25-201ENST00000253794 TMED1Q13445 227 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 OCLNQ16625 522 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 PCK2Q16822 640 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 C3orf36Q3SXR2 165 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 TEX30Q5JUR7 227 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 MEDAGQ5VYS4 303 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 GID4Q8IVV7 300 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 SKA3Q8IX90 412 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 ENTHD1Q8IYW4 607 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 PROKR2Q8NFJ6 384 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 NANOS1Q8WY41 292 aaKnown RBP12.33□□□□□ -0.44
VPS25-201ENST00000253794 WFIKKN1Q96NZ8 548 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 APOL4Q9BPW4 351 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 MED20Q9H944 212 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 IMPAD1Q9NX62 359 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 HAO2Q9NYQ3 351 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 UTP20O75691 2785 aaKnown RBP12.32□□□□□ -0.44
VPS25-201ENST00000253794 A0A096LPE4 126 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 A0A1W2PPL8 197 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 A0A1W2PPZ6 126 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 SH3D21A4FU49 640 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 ZNF503-AS2A6NEH8 195 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 CCDC182A6NF36 153 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 UBL3O95164 117 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 GOSR1O95249 250 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 WNT11O96014 354 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 IGKV3-15P01624 115 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 TFP02787 698 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 GYPBP06028 91 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 PYCR1P32322 319 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 HIST1H3AP68431 136 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 TEKQ02763 1124 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 ENDOGQ14249 297 aaKnown RBP12.32□□□□□ -0.44
VPS25-201ENST00000253794 GGTLC2Q14390 218 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 PPA1Q15181 289 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 HIST2H3PS2Q5TEC6 136 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 IZUMO2Q6UXV1 221 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 HIST2H3AQ71DI3 136 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 BBS1Q8NFJ9 593 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 FAM222BQ8WU58 562 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 FBLIM1Q8WUP2 373 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 CYGBQ8WWM9 190 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 C11orf40Q8WZ69 217 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 MUCL1Q96DR8 90 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 ZNF75AQ96N20 296 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 IL4I1Q96RQ9 567 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 ZNF416Q9BWM5 594 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 MRPL22Q9NWU5 206 aaKnown RBP12.32□□□□□ -0.44
VPS25-201ENST00000253794 PTPN13Q12923 2485 aa12.32□□□□□ -0.44
VPS25-201ENST00000253794 SLC22A31A6NKX4 558 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 C12orf71A8MTZ7 269 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 IGLV1-44P01699 117 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 CBR1P16152 277 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 CRYGSP22914 178 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 FMO3P31513 532 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 KIR2DL3P43628 341 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 UBE2NP61088 152 aaKnown RBP12.31□□□□□ -0.44
VPS25-201ENST00000253794 ISL1P61371 349 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 PCBD1P61457 104 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 SNCBQ16143 134 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 SGCAQ16586 387 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 SLC36A2Q495M3 483 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 LCN1P1Q5VSP4 162 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 MEPCEQ7L2J0 689 aaKnown RBP12.31□□□□□ -0.44
VPS25-201ENST00000253794 SLC16A14Q7RTX9 510 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 TIGD4Q8IY51 512 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 SETD9Q8NE22 299 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 UBE2FQ969M7 185 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 FBXO17Q96EF6 278 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 ZNF582Q96NG8 517 aaPredicted RBP12.31□□□□□ -0.44
VPS25-201ENST00000253794 TEAD3Q99594 435 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 SH3GL3Q99963 347 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 MED18Q9BUE0 208 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 OR51V1Q9H2C8 321 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 SEC61A2Q9H9S3 476 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 KCNN3Q9UGI6 736 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 CYB5R1Q9UHQ9 305 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 FBXL3Q9UKT7 428 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 COMMD3-BMI1R4GMX3 469 aa12.31□□□□□ -0.44
VPS25-201ENST00000253794 MPZL1O95297 269 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 GPANK1O95872 356 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 GSTT1P30711 240 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 HTR1FP30939 366 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 ARR3P36575 388 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 DBPQ10586 325 aaPredicted RBP12.3□□□□□ -0.44
VPS25-201ENST00000253794 AQP6Q13520 282 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 APOFQ13790 326 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 MAD2L1BPQ15013 274 aaPredicted RBP12.3□□□□□ -0.44
VPS25-201ENST00000253794 DAZAP2Q15038 168 aaPredicted RBP12.3□□□□□ -0.44
VPS25-201ENST00000253794 GSG1Q2KHT4 349 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 UGT2A3Q6UWM9 527 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 MEX3BQ6ZN04 569 aaKnown RBP12.3□□□□□ -0.44
VPS25-201ENST00000253794 OR51L1Q8NGJ5 315 aa12.3□□□□□ -0.44
VPS25-201ENST00000253794 OR52N5Q8NH56 324 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms