RNA–Protein interactions for RNA: ENST00000638160.1

CHML-205, Transcript of CHM like, Rab escort protein 2, human

TSL 3 BASIC

Gene CHML, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHML-205	ENST00000638160	ZC3H12C	Q9C0D7	883 aa	Known RBP	33.98	■■■■□ 3.03
CHML-205	ENST00000638160	UFL1	O94874	794 aa		33.97	■■■■□ 3.03
CHML-205	ENST00000638160	LMOD1	P29536	600 aa	Predicted RBP	33.97	■■■■□ 3.03
CHML-205	ENST00000638160	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.97	■■■■□ 3.03
CHML-205	ENST00000638160	TNIP1	Q15025	636 aa		33.97	■■■■□ 3.03
CHML-205	ENST00000638160	CIAPIN1	Q6FI81	312 aa		33.97	■■■■□ 3.03
CHML-205	ENST00000638160	PNMA8A	Q86V59	439 aa	Predicted RBP	33.97	■■■■□ 3.03
CHML-205	ENST00000638160	MINPP1	Q9UNW1	487 aa		33.97	■■■■□ 3.03
CHML-205	ENST00000638160	ATP2B4	P23634	1241 aa		33.96	■■■■□ 3.03
CHML-205	ENST00000638160	CHADL	Q6NUI6	762 aa		33.96	■■■■□ 3.03
CHML-205	ENST00000638160	ANKRD18B	A2A2Z9	1011 aa		33.95	■■■■□ 3.03
CHML-205	ENST00000638160	BRPF1	P55201	1214 aa	Predicted RBP	33.95	■■■■□ 3.03
CHML-205	ENST00000638160	LDHD	Q86WU2	507 aa		33.95	■■■■□ 3.03
CHML-205	ENST00000638160	MPHOSPH8	Q99549	860 aa		33.95	■■■■□ 3.03
CHML-205	ENST00000638160	SCNN1D	P51172	638 aa		33.94	■■■■□ 3.02
CHML-205	ENST00000638160	LTBP1	Q14766	1721 aa		33.93	■■■■□ 3.02
CHML-205	ENST00000638160	YDJC	A8MPS7	323 aa		33.93	■■■■□ 3.02
CHML-205	ENST00000638160	IFIT5	Q13325	482 aa	Known RBP	33.93	■■■■□ 3.02
CHML-205	ENST00000638160	LMBR1L	Q6UX01	489 aa		33.93	■■■■□ 3.02
CHML-205	ENST00000638160	DBNDD1	Q9H9R9	158 aa		33.93	■■■■□ 3.02
CHML-205	ENST00000638160	UTY	O14607	1347 aa		33.93	■■■■□ 3.02
CHML-205	ENST00000638160	RAD17	O75943	681 aa		33.92	■■■■□ 3.02
CHML-205	ENST00000638160	POTEI	P0CG38	1075 aa		33.92	■■■■□ 3.02
CHML-205	ENST00000638160	POTEJ	P0CG39	1038 aa		33.92	■■■■□ 3.02
CHML-205	ENST00000638160	EAPP	Q56P03	285 aa	Predicted RBP	33.92	■■■■□ 3.02
CHML-205	ENST00000638160	GPR101	Q96P66	508 aa	Predicted RBP	33.92	■■■■□ 3.02
CHML-205	ENST00000638160	RARS	P54136	660 aa	Known RBP	33.91	■■■■□ 3.02
CHML-205	ENST00000638160	CHMP3	Q9Y3E7	222 aa		33.91	■■■■□ 3.02
CHML-205	ENST00000638160		G3V3G9	751 aa		33.9	■■■■□ 3.02
CHML-205	ENST00000638160	EPS15	P42566	896 aa		33.9	■■■■□ 3.02
CHML-205	ENST00000638160	DOK7	Q18PE1	504 aa		33.9	■■■■□ 3.02
CHML-205	ENST00000638160	EPHA10	Q5JZY3	1008 aa		33.9	■■■■□ 3.02
CHML-205	ENST00000638160	DCAF8	Q5TAQ9	597 aa		33.9	■■■■□ 3.02
CHML-205	ENST00000638160	ANKRD2	Q9GZV1	360 aa		33.9	■■■■□ 3.02
CHML-205	ENST00000638160	GPRC5D	Q9NZD1	345 aa		33.9	■■■■□ 3.02
CHML-205	ENST00000638160	ECE2	O60344	883 aa		33.89	■■■■□ 3.02
CHML-205	ENST00000638160	NBPF7	P0C2Y1	421 aa	Predicted RBP	33.89	■■■■□ 3.02
CHML-205	ENST00000638160	NOB1	Q9ULX3	412 aa	Known RBP	33.89	■■■■□ 3.02
CHML-205	ENST00000638160	GMPS	P49915	693 aa	Predicted RBP	33.88	■■■■□ 3.01
CHML-205	ENST00000638160	CCDC57	Q2TAC2	916 aa		33.88	■■■■□ 3.01
CHML-205	ENST00000638160	CLEC11A	Q9Y240	323 aa		33.88	■■■■□ 3.01
CHML-205	ENST00000638160	LEMD3	Q9Y2U8	911 aa		33.88	■■■■□ 3.01
CHML-205	ENST00000638160	CCT4	P50991	539 aa	Known RBP	33.87	■■■■□ 3.01
CHML-205	ENST00000638160	SUCLG2	Q96I99	432 aa		33.87	■■■■□ 3.01
CHML-205	ENST00000638160	API5	Q9BZZ5	524 aa	Known RBP	33.87	■■■■□ 3.01
CHML-205	ENST00000638160	USP50	Q70EL3	339 aa	Predicted RBP	33.86	■■■■□ 3.01
CHML-205	ENST00000638160	KAZALD1	Q96I82	304 aa		33.85	■■■■□ 3.01
CHML-205	ENST00000638160	PSMD14	O00487	310 aa		33.84	■■■■□ 3.01
CHML-205	ENST00000638160	USP44	Q9H0E7	712 aa		33.84	■■■■□ 3.01
CHML-205	ENST00000638160	ADARB2	Q9NS39	739 aa	Known RBP	33.84	■■■■□ 3.01
CHML-205	ENST00000638160	TAF7L	Q5H9L4	462 aa		33.83	■■■■□ 3.01
CHML-205	ENST00000638160	ARHGAP45	Q92619	1136 aa		33.83	■■■■□ 3.01
CHML-205	ENST00000638160	DPF2	Q92785	391 aa		33.83	■■■■□ 3.01
CHML-205	ENST00000638160	CHRND	Q07001	517 aa		33.82	■■■■□ 3
CHML-205	ENST00000638160	KCNQ5	Q9NR82	932 aa		33.82	■■■■□ 3
CHML-205	ENST00000638160	MED23	Q9ULK4	1368 aa		33.82	■■■■□ 3
CHML-205	ENST00000638160	KIF16B	Q96L93	1317 aa		33.81	■■■■□ 3
CHML-205	ENST00000638160	WTIP	A6NIX2	430 aa	Predicted RBP	33.81	■■■■□ 3
CHML-205	ENST00000638160	RPS12	P25398	132 aa	Known RBP	33.81	■■■■□ 3
CHML-205	ENST00000638160	PODN	Q7Z5L7	613 aa		33.81	■■■■□ 3
CHML-205	ENST00000638160	CNOT7	Q9UIV1	285 aa	Known RBP	33.81	■■■■□ 3
CHML-205	ENST00000638160	ZNF804B	A4D1E1	1349 aa		33.8	■■■■□ 3
CHML-205	ENST00000638160	RABL6	Q3YEC7	729 aa	Predicted RBP	33.8	■■■■□ 3
CHML-205	ENST00000638160	LDHAL6A	Q6ZMR3	332 aa		33.8	■■■■□ 3
CHML-205	ENST00000638160	CEP350	Q5VT06	3117 aa		33.8	■■■■□ 3
CHML-205	ENST00000638160		H7C1D1	291 aa		33.79	■■■■□ 3
CHML-205	ENST00000638160	VIL1	P09327	827 aa	Known RBP	33.79	■■■■□ 3
CHML-205	ENST00000638160	BICC1	Q9H694	974 aa	Known RBP	33.79	■■■■□ 3
CHML-205	ENST00000638160	ZBTB12	Q9Y330	459 aa	Predicted RBP	33.79	■■■■□ 3
CHML-205	ENST00000638160	ZBED9	Q6R2W3	1325 aa		33.79	■■■■□ 3
CHML-205	ENST00000638160	CNTROB	Q8N137	903 aa		33.78	■■■■□ 3
CHML-205	ENST00000638160	ZNF594	Q96JF6	807 aa	Predicted RBP	33.78	■■■■□ 3
CHML-205	ENST00000638160	SPEF2	Q9C093	1822 aa		33.78	■■■■□ 3
CHML-205	ENST00000638160	IPO8	O15397	1037 aa	Known RBP	33.77	■■■■□ 3
CHML-205	ENST00000638160	ITGBL1	O95965	494 aa	Predicted RBP	33.77	■■■■□ 3
CHML-205	ENST00000638160	KCNJ4	P48050	445 aa		33.77	■■■■□ 3
CHML-205	ENST00000638160	DNAJC5G	Q8N7S2	189 aa		33.77	■■■■□ 3
CHML-205	ENST00000638160	CNNM1	Q9NRU3	951 aa		33.77	■■■■□ 3
CHML-205	ENST00000638160	ADAMTSL1	Q8N6G6	1762 aa		33.76	■■■■□ 3
CHML-205	ENST00000638160	MAP1S	Q66K74	1059 aa	Predicted RBP	33.76	■■■□□ 2.99
CHML-205	ENST00000638160	COA1	Q9GZY4	146 aa		33.76	■■■□□ 2.99
CHML-205	ENST00000638160	PASK	Q96RG2	1323 aa		33.76	■■■□□ 2.99
CHML-205	ENST00000638160	HTRA3	P83110	453 aa		33.75	■■■□□ 2.99
CHML-205	ENST00000638160	MICALL2	Q8IY33	904 aa		33.75	■■■□□ 2.99
CHML-205	ENST00000638160	ANKRD44	Q8N8A2	993 aa		33.75	■■■□□ 2.99
CHML-205	ENST00000638160	TXNRD3	Q86VQ6	643 aa		33.73	■■■□□ 2.99
CHML-205	ENST00000638160	HELB	Q8NG08	1087 aa	Predicted RBP	33.73	■■■□□ 2.99
CHML-205	ENST00000638160	HDAC5	Q9UQL6	1122 aa		33.73	■■■□□ 2.99
CHML-205	ENST00000638160	USP17L3	A6NCW0	530 aa		33.72	■■■□□ 2.99
CHML-205	ENST00000638160	USP17L4	A6NCW7	530 aa		33.72	■■■□□ 2.99
CHML-205	ENST00000638160	TAF5L	O75529	589 aa		33.72	■■■□□ 2.99
CHML-205	ENST00000638160	USP17L1	Q7RTZ2	530 aa		33.72	■■■□□ 2.99
CHML-205	ENST00000638160	AGBL3	Q8NEM8	1001 aa		33.72	■■■□□ 2.99
CHML-205	ENST00000638160	ZC3H15	Q8WU90	426 aa	Known RBP	33.72	■■■□□ 2.99
CHML-205	ENST00000638160	BCAR3	O75815	825 aa		33.71	■■■□□ 2.99
CHML-205	ENST00000638160	RSBN1L	Q6PCB5	846 aa	Predicted RBP	33.71	■■■□□ 2.99
CHML-205	ENST00000638160	C15orf52	Q6ZUT6	534 aa	Known RBP	33.71	■■■□□ 2.99
CHML-205	ENST00000638160	PGAP2	Q9UHJ9	254 aa		33.71	■■■□□ 2.99
CHML-205	ENST00000638160	UBTFL1	P0CB47	393 aa	Predicted RBP	33.7	■■■□□ 2.99
CHML-205	ENST00000638160	INTS3	Q68E01	1043 aa	Known RBP	33.7	■■■□□ 2.99

Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms