RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 HYPKQ9NX55 129 aa14.4□□□□□ -0.1
DDX41-218ENST00000625286 WTIPA6NIX2 430 aaPredicted RBP14.39□□□□□ -0.11
DDX41-218ENST00000625286 CCDC85CA6NKD9 419 aa14.39□□□□□ -0.11
DDX41-218ENST00000625286 ADM5C9JUS6 153 aa14.39□□□□□ -0.11
DDX41-218ENST00000625286 BRPF1P55201 1214 aaPredicted RBP14.39□□□□□ -0.11
DDX41-218ENST00000625286 RBM26Q5T8P6 1007 aaKnown RBP14.39□□□□□ -0.11
DDX41-218ENST00000625286 ELL2O00472 640 aaPredicted RBP14.38□□□□□ -0.11
DDX41-218ENST00000625286 VIL1P09327 827 aaKnown RBP14.38□□□□□ -0.11
DDX41-218ENST00000625286 RGS19P49795 217 aa14.38□□□□□ -0.11
DDX41-218ENST00000625286 HUNKP57058 714 aa14.38□□□□□ -0.11
DDX41-218ENST00000625286 ZBTB38Q8NAP3 1195 aaPredicted RBP14.38□□□□□ -0.11
DDX41-218ENST00000625286 MCOLN1Q9GZU1 580 aa14.38□□□□□ -0.11
DDX41-218ENST00000625286 PODXL2Q9NZ53 605 aa14.38□□□□□ -0.11
DDX41-218ENST00000625286 TNRC18O15417 2968 aaPredicted RBP14.37□□□□□ -0.11
DDX41-218ENST00000625286 KRT26Q7Z3Y9 468 aa14.37□□□□□ -0.11
DDX41-218ENST00000625286 C8orf58Q8NAV2 365 aa14.37□□□□□ -0.11
DDX41-218ENST00000625286 RPS12P25398 132 aaKnown RBP14.36□□□□□ -0.11
DDX41-218ENST00000625286 WDR43Q15061 677 aaKnown RBP eCLIP14.36□□□□□ -0.11
DDX41-218ENST00000625286 CCDC85AQ96PX6 553 aaPredicted RBP14.36□□□□□ -0.11
DDX41-218ENST00000625286 MYD88Q99836 296 aa14.36□□□□□ -0.11
DDX41-218ENST00000625286 APAF1O14727 1248 aa14.35□□□□□ -0.11
DDX41-218ENST00000625286 CA12O43570 354 aa14.35□□□□□ -0.11
DDX41-218ENST00000625286 NOGQ13253 232 aa14.35□□□□□ -0.11
DDX41-218ENST00000625286 RGMBQ6NW40 437 aa14.35□□□□□ -0.11
DDX41-218ENST00000625286 RIC3Q7Z5B4 369 aa14.35□□□□□ -0.11
DDX41-218ENST00000625286 GBA2Q9HCG7 927 aaPredicted RBP14.35□□□□□ -0.11
DDX41-218ENST00000625286 UFL1O94874 794 aa14.34□□□□□ -0.11
DDX41-218ENST00000625286 PCCAP05165 728 aaPredicted RBP14.34□□□□□ -0.11
DDX41-218ENST00000625286 KIF23Q02241 960 aaPredicted RBP14.34□□□□□ -0.11
DDX41-218ENST00000625286 KIF4BQ2VIQ3 1234 aa14.34□□□□□ -0.11
DDX41-218ENST00000625286 TSPYL6Q8N831 410 aa14.34□□□□□ -0.11
DDX41-218ENST00000625286 GMLQ99445 158 aa14.34□□□□□ -0.11
DDX41-218ENST00000625286 EYA3Q99504 573 aa14.34□□□□□ -0.11
DDX41-218ENST00000625286 ZC3H12CQ9C0D7 883 aaKnown RBP14.34□□□□□ -0.11
DDX41-218ENST00000625286 SCAF8Q9UPN6 1271 aaKnown RBP14.34□□□□□ -0.11
DDX41-218ENST00000625286 ZNF280AP59817 542 aaPredicted RBP14.33□□□□□ -0.12
DDX41-218ENST00000625286 CCDC191Q8NCU4 936 aa14.33□□□□□ -0.12
DDX41-218ENST00000625286 DCPSQ96C86 337 aaKnown RBP14.33□□□□□ -0.12
DDX41-218ENST00000625286 PRKRIP1Q9H875 184 aaPredicted RBP14.33□□□□□ -0.12
DDX41-218ENST00000625286 IFT57Q9NWB7 429 aa14.33□□□□□ -0.12
DDX41-218ENST00000625286 GGA3Q9NZ52 723 aa14.33□□□□□ -0.12
DDX41-218ENST00000625286 ANKIB1Q9P2G1 1089 aa14.33□□□□□ -0.12
DDX41-218ENST00000625286 PSME4Q14997 1843 aa14.32□□□□□ -0.12
DDX41-218ENST00000625286 PDE8AO60658 829 aa14.32□□□□□ -0.12
DDX41-218ENST00000625286 IGKV5-2P06315 115 aa14.32□□□□□ -0.12
DDX41-218ENST00000625286 GOLGA2Q08379 1002 aa14.32□□□□□ -0.12
DDX41-218ENST00000625286 DGKZQ13574 1117 aa14.32□□□□□ -0.12
DDX41-218ENST00000625286 SCARF1Q14162 830 aa14.32□□□□□ -0.12
DDX41-218ENST00000625286 RSBN1LQ6PCB5 846 aaPredicted RBP14.32□□□□□ -0.12
DDX41-218ENST00000625286 C2orf69Q8N8R5 385 aa14.32□□□□□ -0.12
DDX41-218ENST00000625286 CDCA5Q96FF9 252 aa14.32□□□□□ -0.12
DDX41-218ENST00000625286 CSRNP1Q96S65 589 aa14.32□□□□□ -0.12
DDX41-218ENST00000625286 METTL22Q9BUU2 404 aaPredicted RBP14.32□□□□□ -0.12
DDX41-218ENST00000625286 RNF186Q9NXI6 227 aa14.32□□□□□ -0.12
DDX41-218ENST00000625286 GGA1Q9UJY5 639 aa14.32□□□□□ -0.12
DDX41-218ENST00000625286 ZNF157P51786 506 aaPredicted RBP14.31□□□□□ -0.12
DDX41-218ENST00000625286 MLLT1Q03111 559 aaPredicted RBP14.31□□□□□ -0.12
DDX41-218ENST00000625286 ANGEL2Q5VTE6 544 aaKnown RBP14.31□□□□□ -0.12
DDX41-218ENST00000625286 MOB2Q70IA6 237 aa14.31□□□□□ -0.12
DDX41-218ENST00000625286 MXD3Q9BW11 206 aa14.31□□□□□ -0.12
DDX41-218ENST00000625286 CWC25Q9NXE8 425 aaPredicted RBP14.31□□□□□ -0.12
DDX41-218ENST00000625286 ZNF646O15015 1829 aaPredicted RBP14.3□□□□□ -0.12
DDX41-218ENST00000625286 SLC10A3P09131 477 aa14.3□□□□□ -0.12
DDX41-218ENST00000625286 GNAI1P63096 354 aa14.3□□□□□ -0.12
DDX41-218ENST00000625286 CCDC152Q4G0S7 254 aa14.3□□□□□ -0.12
DDX41-218ENST00000625286 AGBL3Q8NEM8 1001 aa14.3□□□□□ -0.12
DDX41-218ENST00000625286 CCDC102AQ96A19 550 aa14.3□□□□□ -0.12
DDX41-218ENST00000625286 MAP3K2Q9Y2U5 619 aa14.3□□□□□ -0.12
DDX41-218ENST00000625286 ZNF609O15014 1411 aa14.3□□□□□ -0.12
DDX41-218ENST00000625286 TRPA1O75762 1119 aa14.29□□□□□ -0.12
DDX41-218ENST00000625286 CCDC184Q52MB2 194 aa14.29□□□□□ -0.12
DDX41-218ENST00000625286 PRAMEF18Q5VWM3 479 aa14.29□□□□□ -0.12
DDX41-218ENST00000625286 TXNRD3Q86VQ6 643 aa14.29□□□□□ -0.12
DDX41-218ENST00000625286 SULF1Q8IWU6 871 aa14.29□□□□□ -0.12
DDX41-218ENST00000625286 TTLL11Q8NHH1 800 aa14.29□□□□□ -0.12
DDX41-218ENST00000625286 MINPP1Q9UNW1 487 aa14.29□□□□□ -0.12
DDX41-218ENST00000625286 AKAP11Q9UKA4 1901 aa14.29□□□□□ -0.12
DDX41-218ENST00000625286 PI4KAP2A4QPH2 592 aa14.28□□□□□ -0.12
DDX41-218ENST00000625286 SLC34A2O95436 690 aa14.28□□□□□ -0.12
DDX41-218ENST00000625286 USP17L8P0C7I0 530 aa14.28□□□□□ -0.12
DDX41-218ENST00000625286 XDHP47989 1333 aa14.28□□□□□ -0.12
DDX41-218ENST00000625286 G2E3Q7L622 706 aa14.28□□□□□ -0.12
DDX41-218ENST00000625286 ANKRD18AQ8IVF6 992 aa14.28□□□□□ -0.12
DDX41-218ENST00000625286 PI4KAP1Q8N8J0 262 aa14.28□□□□□ -0.12
DDX41-218ENST00000625286 GREM2Q9H772 168 aa14.28□□□□□ -0.12
DDX41-218ENST00000625286 MYOZ2Q9NPC6 264 aa14.28□□□□□ -0.12
DDX41-218ENST00000625286 SAGE1Q9NXZ1 904 aa14.28□□□□□ -0.12
DDX41-218ENST00000625286 SPEF2Q9C093 1822 aa14.27□□□□□ -0.12
DDX41-218ENST00000625286 USP17L3A6NCW0 530 aa14.27□□□□□ -0.13
DDX41-218ENST00000625286 USP17L4A6NCW7 530 aa14.27□□□□□ -0.13
DDX41-218ENST00000625286 G3V3G9 751 aa14.27□□□□□ -0.13
DDX41-218ENST00000625286 ATP2B4P23634 1241 aa14.27□□□□□ -0.13
DDX41-218ENST00000625286 CTSWP56202 376 aa14.27□□□□□ -0.13
DDX41-218ENST00000625286 CWF19L2Q2TBE0 894 aaKnown RBP14.27□□□□□ -0.13
DDX41-218ENST00000625286 NBPF9Q3BBW0 867 aa14.27□□□□□ -0.13
DDX41-218ENST00000625286 DCAF8Q5TAQ9 597 aa14.27□□□□□ -0.13
DDX41-218ENST00000625286 KSR2Q6VAB6 950 aa14.27□□□□□ -0.13
DDX41-218ENST00000625286 USP17L1Q7RTZ2 530 aa14.27□□□□□ -0.13
DDX41-218ENST00000625286 RASAL3Q86YV0 1011 aa14.27□□□□□ -0.13
DDX41-218ENST00000625286 TSR2Q969E8 191 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms