RNA–Protein interactions for RNA: ENST00000621973.1

DDX1-208, Transcript of DEAD-box helicase 1, humanhuman

TSL 5 BASIC

Gene DDX1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-208ENST00000621973 ST20-MTHFSA0A0A6YYL1 179 aa8.1□□□□□ -1.11
DDX1-208ENST00000621973 HCLS1P14317 486 aaPredicted RBP8.1□□□□□ -1.11
DDX1-208ENST00000621973 OXLD1Q5BKU9 147 aa8.1□□□□□ -1.11
DDX1-208ENST00000621973 SH3BP5LQ7L8J4 393 aa8.1□□□□□ -1.11
DDX1-208ENST00000621973 ZBTB33Q86T24 672 aa8.1□□□□□ -1.11
DDX1-208ENST00000621973 PRAG1Q86YV5 1406 aa8.1□□□□□ -1.11
DDX1-208ENST00000621973 USP5P45974 858 aa8.1□□□□□ -1.11
DDX1-208ENST00000621973 EFCAB2Q5VUJ9 269 aa8.1□□□□□ -1.11
DDX1-208ENST00000621973 JAMLQ86YT9 394 aa8.1□□□□□ -1.11
DDX1-208ENST00000621973 MRPL50Q8N5N7 158 aaKnown RBP8.1□□□□□ -1.11
DDX1-208ENST00000621973 CFHR5Q9BXR6 569 aa8.1□□□□□ -1.11
DDX1-208ENST00000621973 PCDHB3Q9Y5E6 796 aa8.1□□□□□ -1.11
DDX1-208ENST00000621973 ZCCHC11Q5TAX3 1644 aaKnown RBP8.1□□□□□ -1.11
DDX1-208ENST00000621973 ERBINQ96RT1 1412 aa8.09□□□□□ -1.11
DDX1-208ENST00000621973 ATP10AO60312 1499 aa8.09□□□□□ -1.11
DDX1-208ENST00000621973 MAGI2Q86UL8 1455 aa8.09□□□□□ -1.11
DDX1-208ENST00000621973 FAM13AO94988 1023 aa8.09□□□□□ -1.11
DDX1-208ENST00000621973 GNA15P30679 374 aa8.09□□□□□ -1.11
DDX1-208ENST00000621973 TTC39BQ5VTQ0 682 aaPredicted RBP8.09□□□□□ -1.11
DDX1-208ENST00000621973 DZIP3Q86Y13 1208 aaKnown RBP8.09□□□□□ -1.11
DDX1-208ENST00000621973 ARPC5LQ9BPX5 153 aa8.09□□□□□ -1.11
DDX1-208ENST00000621973 HINFPQ9BQA5 517 aa8.09□□□□□ -1.11
DDX1-208ENST00000621973 HOMER2Q9NSB8 354 aa8.09□□□□□ -1.11
DDX1-208ENST00000621973 NRBP1Q9UHY1 535 aa8.09□□□□□ -1.11
DDX1-208ENST00000621973 PCDHGA11Q9Y5H2 935 aa8.09□□□□□ -1.11
DDX1-208ENST00000621973 TRPM1Q7Z4N2 1603 aa8.09□□□□□ -1.12
DDX1-208ENST00000621973 ESYT3A0FGR9 886 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 CFAP69A5D8W1 941 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 FZD6O60353 706 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 MASP1P48740 699 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 MMP16P51512 607 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 SAFB2Q14151 953 aaKnown RBP eCLIP8.08□□□□□ -1.12
DDX1-208ENST00000621973 KIAA0907Q7Z7F0 614 aaPredicted RBP8.08□□□□□ -1.12
DDX1-208ENST00000621973 APBA2Q99767 749 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 SLKQ9H2G2 1235 aaPredicted RBP8.08□□□□□ -1.12
DDX1-208ENST00000621973 GPRASP1Q5JY77 1395 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 KTN1Q86UP2 1357 aaKnown RBP8.08□□□□□ -1.12
DDX1-208ENST00000621973 PNMA6FA0A0J9YX94 578 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 CCDC85CA6NKD9 419 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 CHMP4BP1P59074 171 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 ATP2B2Q01814 1243 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 LRRC41Q15345 812 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 WDR78Q5VTH9 848 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 FAM160A2Q8N612 972 aaPredicted RBP8.08□□□□□ -1.12
DDX1-208ENST00000621973 GPRASP2Q96D09 838 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 DEPDC7Q96QD5 511 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 FAM129BQ96TA1 746 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 CNTN3Q9P232 1028 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 ERBB3P21860 1342 aa8.08□□□□□ -1.12
DDX1-208ENST00000621973 ZNF500O60304 480 aaPredicted RBP8.07□□□□□ -1.12
DDX1-208ENST00000621973 A2MP01023 1474 aa8.07□□□□□ -1.12
DDX1-208ENST00000621973 LAMC1P11047 1609 aa8.07□□□□□ -1.12
DDX1-208ENST00000621973 TSEN2Q8NCE0 465 aaKnown RBP8.07□□□□□ -1.12
DDX1-208ENST00000621973 GGT7Q9UJ14 662 aa8.07□□□□□ -1.12
DDX1-208ENST00000621973 ABCC1P33527 1531 aa8.07□□□□□ -1.12
DDX1-208ENST00000621973 ARAP3Q8WWN8 1544 aa8.07□□□□□ -1.12
DDX1-208ENST00000621973 ZBTB24O43167 697 aaPredicted RBP8.07□□□□□ -1.12
DDX1-208ENST00000621973 PTCD1O75127 700 aaKnown RBP8.07□□□□□ -1.12
DDX1-208ENST00000621973 ETFBP38117 255 aa8.07□□□□□ -1.12
DDX1-208ENST00000621973 PTPN12Q05209 780 aaKnown RBP8.07□□□□□ -1.12
DDX1-208ENST00000621973 AAMPQ13685 434 aa8.07□□□□□ -1.12
DDX1-208ENST00000621973 BRDTQ58F21 947 aaPredicted RBP8.07□□□□□ -1.12
DDX1-208ENST00000621973 HS2ST1Q7LGA3 356 aa8.07□□□□□ -1.12
DDX1-208ENST00000621973 LILRB2Q8N423 598 aa8.07□□□□□ -1.12
DDX1-208ENST00000621973 DMRTB1Q96MA1 342 aa8.07□□□□□ -1.12
DDX1-208ENST00000621973 MRVI1Q9Y6F6 885 aa8.07□□□□□ -1.12
DDX1-208ENST00000621973 E9PCH4 1651 aa8.06□□□□□ -1.12
DDX1-208ENST00000621973 RTEL1-TNFRSF6BF6WH68 1400 aa8.06□□□□□ -1.12
DDX1-208ENST00000621973 TKFCQ3LXA3 575 aa8.06□□□□□ -1.12
DDX1-208ENST00000621973 SH3RF1Q7Z6J0 888 aa8.06□□□□□ -1.12
DDX1-208ENST00000621973 CEP89Q96ST8 783 aa8.06□□□□□ -1.12
DDX1-208ENST00000621973 PRDM9Q9NQV7 894 aa8.06□□□□□ -1.12
DDX1-208ENST00000621973 PPP4R2Q9NY27 417 aa8.06□□□□□ -1.12
DDX1-208ENST00000621973 SWAP70Q9UH65 585 aa8.06□□□□□ -1.12
DDX1-208ENST00000621973 SMG6Q86US8 1419 aaKnown RBP8.06□□□□□ -1.12
DDX1-208ENST00000621973 TRAPPC8Q9Y2L5 1435 aa8.06□□□□□ -1.12
DDX1-208ENST00000621973 IFRD1O00458 451 aaPredicted RBP8.05□□□□□ -1.12
DDX1-208ENST00000621973 RGS20O76081 388 aa8.05□□□□□ -1.12
DDX1-208ENST00000621973 NBPF1Q3BBV0 1214 aa8.05□□□□□ -1.12
DDX1-208ENST00000621973 RGL3Q3MIN7 710 aa8.05□□□□□ -1.12
DDX1-208ENST00000621973 ANKS3Q6ZW76 656 aa8.05□□□□□ -1.12
DDX1-208ENST00000621973 SPSB2Q99619 263 aa8.05□□□□□ -1.12
DDX1-208ENST00000621973 UNC93B1Q9H1C4 597 aa8.05□□□□□ -1.12
DDX1-208ENST00000621973 KAT6BQ8WYB5 2073 aa8.05□□□□□ -1.12
DDX1-208ENST00000621973 BRD4O60885 1362 aaPredicted RBP8.05□□□□□ -1.12
DDX1-208ENST00000621973 TK2O00142 265 aa8.05□□□□□ -1.12
DDX1-208ENST00000621973 FGAP02671 866 aa8.05□□□□□ -1.12
DDX1-208ENST00000621973 EXOSC10Q01780 885 aaKnown RBP8.05□□□□□ -1.12
DDX1-208ENST00000621973 MYBPC2Q14324 1141 aa8.05□□□□□ -1.12
DDX1-208ENST00000621973 NKX2-3Q8TAU0 364 aa8.05□□□□□ -1.12
DDX1-208ENST00000621973 CARD14Q9BXL6 1004 aa8.05□□□□□ -1.12
DDX1-208ENST00000621973 AVENQ9NQS1 362 aaPredicted RBP8.05□□□□□ -1.12
DDX1-208ENST00000621973 EIF2AK4Q9P2K8 1649 aaKnown RBP8.04□□□□□ -1.12
DDX1-208ENST00000621973 MYBBP1AQ9BQG0 1328 aaKnown RBP8.04□□□□□ -1.12
DDX1-208ENST00000621973 KLF4O43474 513 aa8.04□□□□□ -1.12
DDX1-208ENST00000621973 TSPAN6O43657 245 aa8.04□□□□□ -1.12
DDX1-208ENST00000621973 CD53P19397 219 aa8.04□□□□□ -1.12
DDX1-208ENST00000621973 NFE2Q16621 373 aaPredicted RBP8.04□□□□□ -1.12
DDX1-208ENST00000621973 SP7Q8TDD2 431 aaPredicted RBP8.04□□□□□ -1.12
DDX1-208ENST00000621973 APPBP2Q92624 585 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 206.6 ms