RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 FBF1Q8TES7 1133 aa17.62■□□□□ 0.41
TNXB-209ENST00000613214 HAUS7Q99871 368 aa17.62■□□□□ 0.41
TNXB-209ENST00000613214 SCAND2PQ9GZW5 306 aaPredicted RBP17.62■□□□□ 0.41
TNXB-209ENST00000613214 KRT5P13647 590 aa17.61■□□□□ 0.41
TNXB-209ENST00000613214 MAGEB6Q8N7X4 407 aa17.61■□□□□ 0.41
TNXB-209ENST00000613214 ERCC3P19447 782 aa17.61■□□□□ 0.41
TNXB-209ENST00000613214 ATAD2Q6PL18 1390 aa17.61■□□□□ 0.41
TNXB-209ENST00000613214 SNW1Q13573 536 aaKnown RBP17.61■□□□□ 0.41
TNXB-209ENST00000613214 STX1AQ16623 288 aa17.61■□□□□ 0.41
TNXB-209ENST00000613214 BRF1Q92994 677 aa17.61■□□□□ 0.41
TNXB-209ENST00000613214 GSTO1P78417 241 aa17.61■□□□□ 0.41
TNXB-209ENST00000613214 PPP1R21Q6ZMI0 780 aa17.61■□□□□ 0.41
TNXB-209ENST00000613214 NAA15Q9BXJ9 866 aaKnown RBP17.61■□□□□ 0.41
TNXB-209ENST00000613214 DCAF17Q5H9S7 520 aaPredicted RBP17.61■□□□□ 0.41
TNXB-209ENST00000613214 XAGE3Q8WTP9 111 aa17.61■□□□□ 0.41
TNXB-209ENST00000613214 RNF34Q969K3 372 aa17.61■□□□□ 0.41
TNXB-209ENST00000613214 LRRC59Q96AG4 307 aaKnown RBP17.61■□□□□ 0.41
TNXB-209ENST00000613214 CCDC114Q96M63 670 aa17.61■□□□□ 0.41
TNXB-209ENST00000613214 NOD1Q9Y239 953 aa17.61■□□□□ 0.41
TNXB-209ENST00000613214 HSF2BPO75031 334 aa17.6■□□□□ 0.41
TNXB-209ENST00000613214 SPOUT1Q5T280 376 aaKnown RBP17.6■□□□□ 0.41
TNXB-209ENST00000613214 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.6■□□□□ 0.41
TNXB-209ENST00000613214 V9GYY5 206 aaPredicted RBP17.6■□□□□ 0.41
TNXB-209ENST00000613214 MAGEB6P1A0A0J9YX57 407 aa17.6■□□□□ 0.41
TNXB-209ENST00000613214 SYKP43405 635 aa17.6■□□□□ 0.41
TNXB-209ENST00000613214 NCBP1Q09161 790 aaKnown RBP17.6■□□□□ 0.41
TNXB-209ENST00000613214 CCDC6Q16204 474 aa17.6■□□□□ 0.41
TNXB-209ENST00000613214 RTN1Q16799 776 aa17.6■□□□□ 0.41
TNXB-209ENST00000613214 FAM114A1Q8IWE2 563 aa17.6■□□□□ 0.41
TNXB-209ENST00000613214 TNPO1Q92973 898 aaKnown RBP17.6■□□□□ 0.41
TNXB-209ENST00000613214 CNPY2Q9Y2B0 182 aa17.6■□□□□ 0.41
TNXB-209ENST00000613214 SF3A3Q12874 501 aaKnown RBP eCLIP17.59■□□□□ 0.41
TNXB-209ENST00000613214 LMOD1P29536 600 aaPredicted RBP17.59■□□□□ 0.41
TNXB-209ENST00000613214 Q6ZUG5 572 aa17.59■□□□□ 0.41
TNXB-209ENST00000613214 GPCPD1Q9NPB8 672 aa17.59■□□□□ 0.41
TNXB-209ENST00000613214 POLD1P28340 1107 aa17.59■□□□□ 0.41
TNXB-209ENST00000613214 FAM160A1Q05DH4 1040 aa17.59■□□□□ 0.41
TNXB-209ENST00000613214 RARSP54136 660 aaKnown RBP17.59■□□□□ 0.41
TNXB-209ENST00000613214 TPD52P55327 224 aaPredicted RBP17.59■□□□□ 0.41
TNXB-209ENST00000613214 UBASH3AP57075 661 aa17.59■□□□□ 0.41
TNXB-209ENST00000613214 SH2B1Q9NRF2 756 aaPredicted RBP17.59■□□□□ 0.41
TNXB-209ENST00000613214 MCM9Q9NXL9 1143 aa17.59■□□□□ 0.41
TNXB-209ENST00000613214 ZBTB43O43298 467 aa17.59■□□□□ 0.41
TNXB-209ENST00000613214 CEP112Q8N8E3 955 aa17.59■□□□□ 0.41
TNXB-209ENST00000613214 GEN1Q17RS7 908 aa17.58■□□□□ 0.41
TNXB-209ENST00000613214 COPS6Q7L5N1 327 aa17.58■□□□□ 0.41
TNXB-209ENST00000613214 ERMNQ8TAM6 284 aa17.58■□□□□ 0.41
TNXB-209ENST00000613214 SMARCA4P51532 1647 aa17.58■□□□□ 0.41
TNXB-209ENST00000613214 SPDYE3A6NKU9 549 aa17.58■□□□□ 0.41
TNXB-209ENST00000613214 TBC1D9Q6ZT07 1266 aa17.58■□□□□ 0.41
TNXB-209ENST00000613214 PKNOX2Q96KN3 472 aa17.58■□□□□ 0.41
TNXB-209ENST00000613214 EAPPQ56P03 285 aaPredicted RBP17.58■□□□□ 0.4
TNXB-209ENST00000613214 SLC9C2Q5TAH2 1124 aa17.58■□□□□ 0.4
TNXB-209ENST00000613214 ANKRD13DQ6ZTN6 518 aa17.58■□□□□ 0.4
TNXB-209ENST00000613214 STAC3Q96MF2 364 aa17.58■□□□□ 0.4
TNXB-209ENST00000613214 PPP4R3BQ5MIZ7 849 aa17.58■□□□□ 0.4
TNXB-209ENST00000613214 JDP2Q8WYK2 163 aa17.58■□□□□ 0.4
TNXB-209ENST00000613214 NLRP3Q96P20 1036 aa17.58■□□□□ 0.4
TNXB-209ENST00000613214 ECHDC1Q9NTX5 307 aa17.58■□□□□ 0.4
TNXB-209ENST00000613214 GABPAQ06546 454 aa17.58■□□□□ 0.4
TNXB-209ENST00000613214 IMPG2Q9BZV3 1241 aa17.58■□□□□ 0.4
TNXB-209ENST00000613214 PFDN4Q9NQP4 134 aa17.58■□□□□ 0.4
TNXB-209ENST00000613214 RAPGEF1Q13905 1077 aa17.57■□□□□ 0.4
TNXB-209ENST00000613214 CCDC102BQ68D86 513 aa17.57■□□□□ 0.4
TNXB-209ENST00000613214 ZCRB1Q8TBF4 217 aaKnown RBP17.57■□□□□ 0.4
TNXB-209ENST00000613214 RNASE9P60153 205 aaKnown RBP17.57■□□□□ 0.4
TNXB-209ENST00000613214 CGNQ9P2M7 1197 aaKnown RBP17.57■□□□□ 0.4
TNXB-209ENST00000613214 DTNBO60941 627 aa17.57■□□□□ 0.4
TNXB-209ENST00000613214 BIRC2Q13490 618 aa17.57■□□□□ 0.4
TNXB-209ENST00000613214 ANO3Q9BYT9 981 aa17.57■□□□□ 0.4
TNXB-209ENST00000613214 MCM5P33992 734 aa17.57■□□□□ 0.4
TNXB-209ENST00000613214 ZNF804AQ7Z570 1209 aa17.57■□□□□ 0.4
TNXB-209ENST00000613214 KARSQ15046 597 aaKnown RBP17.57■□□□□ 0.4
TNXB-209ENST00000613214 CEP135Q66GS9 1140 aa17.56■□□□□ 0.4
TNXB-209ENST00000613214 HGSO14964 777 aaPredicted RBP17.56■□□□□ 0.4
TNXB-209ENST00000613214 KIAA1107Q9UPP5 1409 aa17.56■□□□□ 0.4
TNXB-209ENST00000613214 MBIPQ9NS73 344 aa17.56■□□□□ 0.4
TNXB-209ENST00000613214 FCHSD1Q86WN1 690 aa17.56■□□□□ 0.4
TNXB-209ENST00000613214 CCDC155Q8N6L0 562 aa17.56■□□□□ 0.4
TNXB-209ENST00000613214 ZC3H12CQ9C0D7 883 aaKnown RBP17.56■□□□□ 0.4
TNXB-209ENST00000613214 ZHX1Q9UKY1 873 aaPredicted RBP17.56■□□□□ 0.4
TNXB-209ENST00000613214 TRIM27P14373 513 aa17.56■□□□□ 0.4
TNXB-209ENST00000613214 LRRC45Q96CN5 670 aa17.56■□□□□ 0.4
TNXB-209ENST00000613214 ANO6Q4KMQ2 910 aa17.55■□□□□ 0.4
TNXB-209ENST00000613214 DZIP3Q86Y13 1208 aaKnown RBP17.55■□□□□ 0.4
TNXB-209ENST00000613214 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.55■□□□□ 0.4
TNXB-209ENST00000613214 IFT81Q8WYA0 676 aa17.55■□□□□ 0.4
TNXB-209ENST00000613214 SNRPA1P09661 255 aaKnown RBP17.55■□□□□ 0.4
TNXB-209ENST00000613214 SMC1BQ8NDV3 1235 aa17.55■□□□□ 0.4
TNXB-209ENST00000613214 TTLL3Q9Y4R7 772 aa17.55■□□□□ 0.4
TNXB-209ENST00000613214 MAP7D1Q3KQU3 841 aa17.55■□□□□ 0.4
TNXB-209ENST00000613214 PPP1R9BQ96SB3 815 aa17.55■□□□□ 0.4
TNXB-209ENST00000613214 MAK16Q9BXY0 300 aaKnown RBP17.55■□□□□ 0.4
TNXB-209ENST00000613214 C6orf50Q9HD87 102 aa17.55■□□□□ 0.4
TNXB-209ENST00000613214 ZBTB16Q05516 673 aa17.55■□□□□ 0.4
TNXB-209ENST00000613214 SPATA24Q86W54 205 aa17.55■□□□□ 0.4
TNXB-209ENST00000613214 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.55■□□□□ 0.4
TNXB-209ENST00000613214 MYCP01106 439 aaPredicted RBP17.55■□□□□ 0.4
TNXB-209ENST00000613214 MYCLP12524 364 aaPredicted RBP17.55■□□□□ 0.4
TNXB-209ENST00000613214 C6orf163Q5TEZ5 329 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms