RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 C9orf131Q5VYM1 1079 aa17.34■□□□□ 0.37
RNF40-212ENST00000602784 SLC51AQ86UW1 340 aa17.34■□□□□ 0.37
RNF40-212ENST00000602784 ANKRD2Q9GZV1 360 aa17.34■□□□□ 0.37
RNF40-212ENST00000602784 NSFL1CQ9UNZ2 370 aaKnown RBP17.34■□□□□ 0.37
RNF40-212ENST00000602784 XDHP47989 1333 aa17.33■□□□□ 0.36
RNF40-212ENST00000602784 RFX5P48382 616 aaPredicted RBP17.33■□□□□ 0.36
RNF40-212ENST00000602784 ZNF594Q96JF6 807 aaPredicted RBP17.33■□□□□ 0.36
RNF40-212ENST00000602784 ZBTB40Q9NUA8 1239 aa17.33■□□□□ 0.36
RNF40-212ENST00000602784 RNF181Q9P0P0 153 aa17.33■□□□□ 0.36
RNF40-212ENST00000602784 ANKIB1Q9P2G1 1089 aa17.33■□□□□ 0.36
RNF40-212ENST00000602784 FBXO3Q9UK99 471 aa17.33■□□□□ 0.36
RNF40-212ENST00000602784 ZC3H4Q9UPT8 1303 aaKnown RBP17.32■□□□□ 0.36
RNF40-212ENST00000602784 IARSP41252 1262 aaKnown RBP17.32■□□□□ 0.36
RNF40-212ENST00000602784 ZNF277Q9NRM2 450 aaPredicted RBP17.32■□□□□ 0.36
RNF40-212ENST00000602784 RIPOR2Q9Y4F9 1068 aa17.32■□□□□ 0.36
RNF40-212ENST00000602784 LTBP1Q14766 1721 aa17.32■□□□□ 0.36
RNF40-212ENST00000602784 ATP2B4P23634 1241 aa17.31■□□□□ 0.36
RNF40-212ENST00000602784 PTPN12Q05209 780 aaKnown RBP17.31■□□□□ 0.36
RNF40-212ENST00000602784 TBC1D16Q8TBP0 767 aa17.31■□□□□ 0.36
RNF40-212ENST00000602784 CNNM1Q9NRU3 951 aa17.31■□□□□ 0.36
RNF40-212ENST00000602784 POLLQ9UGP5 575 aa17.31■□□□□ 0.36
RNF40-212ENST00000602784 GGA1Q9UJY5 639 aa17.31■□□□□ 0.36
RNF40-212ENST00000602784 SRGAP3O43295 1099 aa17.3■□□□□ 0.36
RNF40-212ENST00000602784 ATP8B2P98198 1209 aa17.3■□□□□ 0.36
RNF40-212ENST00000602784 CHRNDQ07001 517 aa17.3■□□□□ 0.36
RNF40-212ENST00000602784 KIAA2012Q0VF49 1180 aa17.3■□□□□ 0.36
RNF40-212ENST00000602784 EYA3Q99504 573 aa17.3■□□□□ 0.36
RNF40-212ENST00000602784 COPRSQ9NQ92 184 aa17.3■□□□□ 0.36
RNF40-212ENST00000602784 LEMD3Q9Y2U8 911 aa17.3■□□□□ 0.36
RNF40-212ENST00000602784 DUOX1Q9NRD9 1551 aa17.3■□□□□ 0.36
RNF40-212ENST00000602784 SPEF2Q9C093 1822 aa17.3■□□□□ 0.36
RNF40-212ENST00000602784 DICER1Q9UPY3 1922 aaKnown RBP17.29■□□□□ 0.36
RNF40-212ENST00000602784 CCDC88AQ3V6T2 1871 aa17.29■□□□□ 0.36
RNF40-212ENST00000602784 MROH5Q6ZUA9 1318 aa17.29■□□□□ 0.36
RNF40-212ENST00000602784 C6orf229H3BNL8 230 aa17.29■□□□□ 0.36
RNF40-212ENST00000602784 CIAO1O76071 339 aa17.29■□□□□ 0.36
RNF40-212ENST00000602784 WASHC4Q2M389 1173 aa17.29■□□□□ 0.36
RNF40-212ENST00000602784 PUS3Q9BZE2 481 aaKnown RBP17.29■□□□□ 0.36
RNF40-212ENST00000602784 EYA2O00167 538 aa17.28■□□□□ 0.36
RNF40-212ENST00000602784 PPIP5K2O43314 1243 aa17.28■□□□□ 0.36
RNF40-212ENST00000602784 UFL1O94874 794 aa17.28■□□□□ 0.36
RNF40-212ENST00000602784 LARGE2Q8N3Y3 721 aa17.28■□□□□ 0.36
RNF40-212ENST00000602784 KLHDC4Q8TBB5 520 aa17.28■□□□□ 0.36
RNF40-212ENST00000602784 SSH3Q8TE77 659 aa17.28■□□□□ 0.36
RNF40-212ENST00000602784 JDP2Q8WYK2 163 aa17.28■□□□□ 0.36
RNF40-212ENST00000602784 PNMA6EA0A0J9YXQ4 647 aa17.27■□□□□ 0.36
RNF40-212ENST00000602784 YY1P25490 414 aa17.27■□□□□ 0.36
RNF40-212ENST00000602784 POLA2Q14181 598 aa17.27■□□□□ 0.36
RNF40-212ENST00000602784 LRRC24Q50LG9 513 aa17.27■□□□□ 0.36
RNF40-212ENST00000602784 RPAP2Q8IXW5 612 aaPredicted RBP17.27■□□□□ 0.36
RNF40-212ENST00000602784 ZC3H12CQ9C0D7 883 aaKnown RBP17.27■□□□□ 0.36
RNF40-212ENST00000602784 C1orf115Q9H7X2 142 aa17.27■□□□□ 0.36
RNF40-212ENST00000602784 SUPT16HQ9Y5B9 1047 aaKnown RBP17.27■□□□□ 0.36
RNF40-212ENST00000602784 ZNF804BA4D1E1 1349 aa17.26■□□□□ 0.35
RNF40-212ENST00000602784 AOC3Q16853 763 aa17.26■□□□□ 0.35
RNF40-212ENST00000602784 CEP85Q6P2H3 762 aa17.26■□□□□ 0.35
RNF40-212ENST00000602784 C15orf52Q6ZUT6 534 aaKnown RBP17.26■□□□□ 0.35
RNF40-212ENST00000602784 ATG9AQ7Z3C6 839 aa17.26■□□□□ 0.35
RNF40-212ENST00000602784 FZD9O00144 591 aa17.25■□□□□ 0.35
RNF40-212ENST00000602784 TAF5LO75529 589 aa17.25■□□□□ 0.35
RNF40-212ENST00000602784 IL15P40933 162 aaPredicted RBP17.25■□□□□ 0.35
RNF40-212ENST00000602784 UBE4AQ14139 1066 aa17.25■□□□□ 0.35
RNF40-212ENST00000602784 METTL24Q5JXM2 366 aa17.25■□□□□ 0.35
RNF40-212ENST00000602784 NIM1KQ8IY84 436 aa17.25■□□□□ 0.35
RNF40-212ENST00000602784 HELBQ8NG08 1087 aaPredicted RBP17.25■□□□□ 0.35
RNF40-212ENST00000602784 MED23Q9ULK4 1368 aa17.25■□□□□ 0.35
RNF40-212ENST00000602784 WTIPA6NIX2 430 aaPredicted RBP17.24■□□□□ 0.35
RNF40-212ENST00000602784 PDE8BO95263 885 aa17.24■□□□□ 0.35
RNF40-212ENST00000602784 KCNJ4P48050 445 aa17.24■□□□□ 0.35
RNF40-212ENST00000602784 AAMPQ13685 434 aa17.24■□□□□ 0.35
RNF40-212ENST00000602784 VGLL2Q8N8G2 317 aa17.24■□□□□ 0.35
RNF40-212ENST00000602784 ZNRF3Q9ULT6 936 aa17.24■□□□□ 0.35
RNF40-212ENST00000602784 PA2G4Q9UQ80 394 aaKnown RBP17.24■□□□□ 0.35
RNF40-212ENST00000602784 COL4A5P29400 1685 aa17.23■□□□□ 0.35
RNF40-212ENST00000602784 DPY19L2Q6NUT2 758 aa17.23■□□□□ 0.35
RNF40-212ENST00000602784 SIL1Q9H173 461 aa17.23■□□□□ 0.35
RNF40-212ENST00000602784 CEP126Q9P2H0 1117 aa17.23■□□□□ 0.35
RNF40-212ENST00000602784 NOP58Q9Y2X3 529 aaKnown RBP17.23■□□□□ 0.35
RNF40-212ENST00000602784 TIAM2Q8IVF5 1701 aa17.23■□□□□ 0.35
RNF40-212ENST00000602784 A0A1B0GUL6 1792 aa17.23■□□□□ 0.35
RNF40-212ENST00000602784 GLTPD2A6NH11 291 aa17.22■□□□□ 0.35
RNF40-212ENST00000602784 RIMBP2O15034 1052 aa17.22■□□□□ 0.35
RNF40-212ENST00000602784 HMMRO75330 724 aa17.22■□□□□ 0.35
RNF40-212ENST00000602784 GPR101Q96P66 508 aaPredicted RBP17.22■□□□□ 0.35
RNF40-212ENST00000602784 CRBNQ96SW2 442 aa17.22■□□□□ 0.35
RNF40-212ENST00000602784 IRS2Q9Y4H2 1338 aa17.21■□□□□ 0.35
RNF40-212ENST00000602784 EIF6P56537 245 aaKnown RBP17.21■□□□□ 0.35
RNF40-212ENST00000602784 G3BP1Q13283 466 aaKnown RBP eCLIP17.21■□□□□ 0.35
RNF40-212ENST00000602784 PUM3Q15397 648 aaKnown RBP17.21■□□□□ 0.35
RNF40-212ENST00000602784 PODNQ7Z5L7 613 aa17.21■□□□□ 0.35
RNF40-212ENST00000602784 SIRT2Q8IXJ6 389 aa17.21■□□□□ 0.35
RNF40-212ENST00000602784 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.34
RNF40-212ENST00000602784 G3V3G9 751 aa17.2■□□□□ 0.34
RNF40-212ENST00000602784 SNAP23O00161 211 aa17.2■□□□□ 0.34
RNF40-212ENST00000602784 FGFR2P21802 821 aa17.2■□□□□ 0.34
RNF40-212ENST00000602784 DCAF8Q5TAQ9 597 aa17.2■□□□□ 0.34
RNF40-212ENST00000602784 TXNRD3Q86VQ6 643 aa17.2■□□□□ 0.34
RNF40-212ENST00000602784 COA1Q9GZY4 146 aa17.2■□□□□ 0.34
RNF40-212ENST00000602784 YDJCA8MPS7 323 aa17.19■□□□□ 0.34
RNF40-212ENST00000602784 ECE2O60344 883 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms