RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 C20orf194Q5TEA3 1177 aa17.95■□□□□ 0.46
LIG1-208ENST00000595758 LDHAL6AQ6ZMR3 332 aa17.95■□□□□ 0.46
LIG1-208ENST00000595758 PODXL2Q9NZ53 605 aa17.95■□□□□ 0.46
LIG1-208ENST00000595758 XDHP47989 1333 aa17.95■□□□□ 0.46
LIG1-208ENST00000595758 SBF1O95248 1867 aa17.95■□□□□ 0.46
LIG1-208ENST00000595758 RRP1P56182 461 aaKnown RBP17.94■□□□□ 0.46
LIG1-208ENST00000595758 TBC1D16Q8TBP0 767 aa17.94■□□□□ 0.46
LIG1-208ENST00000595758 ANKRD2Q9GZV1 360 aa17.94■□□□□ 0.46
LIG1-208ENST00000595758 VPS33BQ9H267 617 aa17.94■□□□□ 0.46
LIG1-208ENST00000595758 CNNM1Q9NRU3 951 aa17.94■□□□□ 0.46
LIG1-208ENST00000595758 POLLQ9UGP5 575 aa17.94■□□□□ 0.46
LIG1-208ENST00000595758 GGA1Q9UJY5 639 aa17.94■□□□□ 0.46
LIG1-208ENST00000595758 LRRC37AA6NMS7 1700 aa17.94■□□□□ 0.46
LIG1-208ENST00000595758 PPIP5K2O43314 1243 aa17.93■□□□□ 0.46
LIG1-208ENST00000595758 UFL1O94874 794 aa17.93■□□□□ 0.46
LIG1-208ENST00000595758 LARGE2Q8N3Y3 721 aa17.93■□□□□ 0.46
LIG1-208ENST00000595758 DDX19BQ9UMR2 479 aa17.93■□□□□ 0.46
LIG1-208ENST00000595758 ATP2B4P23634 1241 aa17.92■□□□□ 0.46
LIG1-208ENST00000595758 RFX5P48382 616 aaPredicted RBP17.92■□□□□ 0.46
LIG1-208ENST00000595758 CHRNDQ07001 517 aa17.92■□□□□ 0.46
LIG1-208ENST00000595758 WASHC4Q2M389 1173 aa17.92■□□□□ 0.46
LIG1-208ENST00000595758 KLHDC4Q8TBB5 520 aa17.92■□□□□ 0.46
LIG1-208ENST00000595758 JDP2Q8WYK2 163 aa17.92■□□□□ 0.46
LIG1-208ENST00000595758 EYA3Q99504 573 aa17.92■□□□□ 0.46
LIG1-208ENST00000595758 PUS3Q9BZE2 481 aaKnown RBP17.92■□□□□ 0.46
LIG1-208ENST00000595758 CHMP4BQ9H444 224 aaKnown RBP17.92■□□□□ 0.46
LIG1-208ENST00000595758 ZC3H4Q9UPT8 1303 aaKnown RBP17.92■□□□□ 0.46
LIG1-208ENST00000595758 SRGAP3O43295 1099 aa17.91■□□□□ 0.46
LIG1-208ENST00000595758 KIAA2012Q0VF49 1180 aa17.91■□□□□ 0.46
LIG1-208ENST00000595758 MTX1Q13505 466 aa17.91■□□□□ 0.46
LIG1-208ENST00000595758 AOC3Q16853 763 aa17.91■□□□□ 0.46
LIG1-208ENST00000595758 C1orf115Q9H7X2 142 aa17.91■□□□□ 0.46
LIG1-208ENST00000595758 SPEF2Q9C093 1822 aa17.91■□□□□ 0.46
LIG1-208ENST00000595758 CCDC88AQ3V6T2 1871 aa17.9■□□□□ 0.46
LIG1-208ENST00000595758 RIMBP2O15034 1052 aa17.9■□□□□ 0.46
LIG1-208ENST00000595758 PTPN12Q05209 780 aaKnown RBP17.9■□□□□ 0.46
LIG1-208ENST00000595758 NIM1KQ8IY84 436 aa17.9■□□□□ 0.46
LIG1-208ENST00000595758 HELBQ8NG08 1087 aaPredicted RBP17.9■□□□□ 0.46
LIG1-208ENST00000595758 GPR101Q96P66 508 aaPredicted RBP17.9■□□□□ 0.46
LIG1-208ENST00000595758 ZC3H12CQ9C0D7 883 aaKnown RBP17.9■□□□□ 0.46
LIG1-208ENST00000595758 LEMD3Q9Y2U8 911 aa17.9■□□□□ 0.46
LIG1-208ENST00000595758 RIPOR2Q9Y4F9 1068 aa17.9■□□□□ 0.46
LIG1-208ENST00000595758 DUOX1Q9NRD9 1551 aa17.89■□□□□ 0.45
LIG1-208ENST00000595758 TAF5LO75529 589 aa17.89■□□□□ 0.45
LIG1-208ENST00000595758 KCNJ4P48050 445 aa17.89■□□□□ 0.45
LIG1-208ENST00000595758 LRRC24Q50LG9 513 aa17.89■□□□□ 0.45
LIG1-208ENST00000595758 WTIPA6NIX2 430 aaPredicted RBP17.88■□□□□ 0.45
LIG1-208ENST00000595758 EYA2O00167 538 aa17.88■□□□□ 0.45
LIG1-208ENST00000595758 ATP8B2P98198 1209 aa17.88■□□□□ 0.45
LIG1-208ENST00000595758 COPRSQ9NQ92 184 aa17.88■□□□□ 0.45
LIG1-208ENST00000595758 ZBTB40Q9NUA8 1239 aa17.88■□□□□ 0.45
LIG1-208ENST00000595758 ZNF804BA4D1E1 1349 aa17.88■□□□□ 0.45
LIG1-208ENST00000595758 MROH5Q6ZUA9 1318 aa17.88■□□□□ 0.45
LIG1-208ENST00000595758 LTBP1Q14766 1721 aa17.87■□□□□ 0.45
LIG1-208ENST00000595758 PNMA6EA0A0J9YXQ4 647 aa17.87■□□□□ 0.45
LIG1-208ENST00000595758 FZD9O00144 591 aa17.87■□□□□ 0.45
LIG1-208ENST00000595758 METTL24Q5JXM2 366 aa17.87■□□□□ 0.45
LIG1-208ENST00000595758 DPY19L2Q6NUT2 758 aa17.87■□□□□ 0.45
LIG1-208ENST00000595758 SIL1Q9H173 461 aa17.87■□□□□ 0.45
LIG1-208ENST00000595758 FBXO3Q9UK99 471 aa17.87■□□□□ 0.45
LIG1-208ENST00000595758 ZNRF3Q9ULT6 936 aa17.87■□□□□ 0.45
LIG1-208ENST00000595758 PA2G4Q9UQ80 394 aaKnown RBP17.87■□□□□ 0.45
LIG1-208ENST00000595758 DICER1Q9UPY3 1922 aaKnown RBP17.87■□□□□ 0.45
LIG1-208ENST00000595758 G3V3G9 751 aa17.86■□□□□ 0.45
LIG1-208ENST00000595758 CIAO1O76071 339 aa17.86■□□□□ 0.45
LIG1-208ENST00000595758 EIF6P56537 245 aaKnown RBP17.86■□□□□ 0.45
LIG1-208ENST00000595758 DCAF8Q5TAQ9 597 aa17.86■□□□□ 0.45
LIG1-208ENST00000595758 ZNF784Q8NCA9 323 aaPredicted RBP17.86■□□□□ 0.45
LIG1-208ENST00000595758 ZNF526Q8TF50 670 aaPredicted RBP17.86■□□□□ 0.45
LIG1-208ENST00000595758 COL4A5P29400 1685 aa17.86■□□□□ 0.45
LIG1-208ENST00000595758 GLTPD2A6NH11 291 aa17.85■□□□□ 0.45
LIG1-208ENST00000595758 SNAP23O00161 211 aa17.85■□□□□ 0.45
LIG1-208ENST00000595758 DOK7Q18PE1 504 aa17.85■□□□□ 0.45
LIG1-208ENST00000595758 ATG9AQ7Z3C6 839 aa17.85■□□□□ 0.45
LIG1-208ENST00000595758 SSH3Q8TE77 659 aa17.85■□□□□ 0.45
LIG1-208ENST00000595758 SUPT16HQ9Y5B9 1047 aaKnown RBP17.85■□□□□ 0.45
LIG1-208ENST00000595758 MED23Q9ULK4 1368 aa17.84■□□□□ 0.45
LIG1-208ENST00000595758 KDM2BQ8NHM5 1336 aa17.84■□□□□ 0.45
LIG1-208ENST00000595758 ZNF541Q9H0D2 1346 aa17.84■□□□□ 0.45
LIG1-208ENST00000595758 IL15P40933 162 aaPredicted RBP17.84■□□□□ 0.45
LIG1-208ENST00000595758 POLA2Q14181 598 aa17.84■□□□□ 0.45
LIG1-208ENST00000595758 CEP85Q6P2H3 762 aa17.84■□□□□ 0.45
LIG1-208ENST00000595758 DBNDD1Q9H9R9 158 aa17.84■□□□□ 0.45
LIG1-208ENST00000595758 TIAM2Q8IVF5 1701 aa17.84■□□□□ 0.45
LIG1-208ENST00000595758 ECE2O60344 883 aa17.83■□□□□ 0.44
LIG1-208ENST00000595758 PDE8BO95263 885 aa17.83■□□□□ 0.44
LIG1-208ENST00000595758 KLRK1P26718 216 aa17.83■□□□□ 0.44
LIG1-208ENST00000595758 UBE4AQ14139 1066 aa17.83■□□□□ 0.44
LIG1-208ENST00000595758 GPBP1L1Q9HC44 474 aaPredicted RBP17.83■□□□□ 0.44
LIG1-208ENST00000595758 CEP126Q9P2H0 1117 aa17.83■□□□□ 0.44
LIG1-208ENST00000595758 DDNO94850 711 aaPredicted RBP17.82■□□□□ 0.44
LIG1-208ENST00000595758 CXCL9Q07325 125 aa17.82■□□□□ 0.44
LIG1-208ENST00000595758 G3BP1Q13283 466 aaKnown RBP eCLIP17.82■□□□□ 0.44
LIG1-208ENST00000595758 C15orf52Q6ZUT6 534 aaKnown RBP17.82■□□□□ 0.44
LIG1-208ENST00000595758 TXNRD3Q86VQ6 643 aa17.82■□□□□ 0.44
LIG1-208ENST00000595758 RPAP2Q8IXW5 612 aaPredicted RBP17.82■□□□□ 0.44
LIG1-208ENST00000595758 VGLL2Q8N8G2 317 aa17.82■□□□□ 0.44
LIG1-208ENST00000595758 YDJCA8MPS7 323 aa17.81■□□□□ 0.44
LIG1-208ENST00000595758 RAD17O75943 681 aa17.81■□□□□ 0.44
LIG1-208ENST00000595758 GPC2Q8N158 579 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms