RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 USP48Q86UV5 1035 aa20.59■□□□□ 0.89
GTF2F1-203ENST00000594213 EYA3Q99504 573 aa20.59■□□□□ 0.89
GTF2F1-203ENST00000594213 MYD88Q99836 296 aa20.59■□□□□ 0.89
GTF2F1-203ENST00000594213 VIL1P09327 827 aaKnown RBP20.58■□□□□ 0.89
GTF2F1-203ENST00000594213 DLK2Q6UY11 383 aa20.58■□□□□ 0.89
GTF2F1-203ENST00000594213 METTL22Q9BUU2 404 aaPredicted RBP20.58■□□□□ 0.89
GTF2F1-203ENST00000594213 HSP90B1P14625 803 aaKnown RBP20.57■□□□□ 0.88
GTF2F1-203ENST00000594213 TRPM7Q96QT4 1865 aa20.57■□□□□ 0.88
GTF2F1-203ENST00000594213 PDE8AO60658 829 aa20.56■□□□□ 0.88
GTF2F1-203ENST00000594213 TBC1D10BQ4KMP7 808 aaPredicted RBP20.56■□□□□ 0.88
GTF2F1-203ENST00000594213 TSPYL6Q8N831 410 aa20.56■□□□□ 0.88
GTF2F1-203ENST00000594213 JARID2Q92833 1246 aaPredicted RBP20.56■□□□□ 0.88
GTF2F1-203ENST00000594213 ABHD8Q96I13 439 aa20.56■□□□□ 0.88
GTF2F1-203ENST00000594213 BEGAINQ9BUH8 593 aa20.56■□□□□ 0.88
GTF2F1-203ENST00000594213 ZC3H12CQ9C0D7 883 aaKnown RBP20.56■□□□□ 0.88
GTF2F1-203ENST00000594213 ZNF408Q9H9D4 720 aa20.56■□□□□ 0.88
GTF2F1-203ENST00000594213 CWC25Q9NXE8 425 aaPredicted RBP20.56■□□□□ 0.88
GTF2F1-203ENST00000594213 CCDC152Q4G0S7 254 aa20.55■□□□□ 0.88
GTF2F1-203ENST00000594213 CCDC30Q5VVM6 783 aa20.55■□□□□ 0.88
GTF2F1-203ENST00000594213 BRPF1P55201 1214 aaPredicted RBP20.54■□□□□ 0.88
GTF2F1-203ENST00000594213 KRT26Q7Z3Y9 468 aa20.54■□□□□ 0.88
GTF2F1-203ENST00000594213 ZIC5Q96T25 663 aa20.54■□□□□ 0.88
GTF2F1-203ENST00000594213 GGA1Q9UJY5 639 aa20.54■□□□□ 0.88
GTF2F1-203ENST00000594213 CA12O43570 354 aa20.53■□□□□ 0.88
GTF2F1-203ENST00000594213 UFL1O94874 794 aa20.53■□□□□ 0.88
GTF2F1-203ENST00000594213 IGKV5-2P06315 115 aa20.53■□□□□ 0.88
GTF2F1-203ENST00000594213 CHMP4AQ9BY43 222 aa20.53■□□□□ 0.88
GTF2F1-203ENST00000594213 TSKSQ9UJT2 592 aa20.53■□□□□ 0.88
GTF2F1-203ENST00000594213 DDX58O95786 925 aaKnown RBP20.52■□□□□ 0.88
GTF2F1-203ENST00000594213 HUNKP57058 714 aa20.52■□□□□ 0.88
GTF2F1-203ENST00000594213 RBM26Q5T8P6 1007 aaKnown RBP20.52■□□□□ 0.88
GTF2F1-203ENST00000594213 KSR2Q6VAB6 950 aa20.52■□□□□ 0.88
GTF2F1-203ENST00000594213 ANKIB1Q9P2G1 1089 aa20.52■□□□□ 0.88
GTF2F1-203ENST00000594213 MAP3K2Q9Y2U5 619 aa20.52■□□□□ 0.88
GTF2F1-203ENST00000594213 ZNF280AP59817 542 aaPredicted RBP20.51■□□□□ 0.87
GTF2F1-203ENST00000594213 NOGQ13253 232 aa20.51■□□□□ 0.87
GTF2F1-203ENST00000594213 CCDC85AQ96PX6 553 aaPredicted RBP20.51■□□□□ 0.87
GTF2F1-203ENST00000594213 GMLQ99445 158 aa20.51■□□□□ 0.87
GTF2F1-203ENST00000594213 ZNF609O15014 1411 aa20.51■□□□□ 0.87
GTF2F1-203ENST00000594213 PI4KAP2A4QPH2 592 aa20.5■□□□□ 0.87
GTF2F1-203ENST00000594213 FAM155AB1AL88 458 aaPredicted RBP20.5■□□□□ 0.87
GTF2F1-203ENST00000594213 ADM5C9JUS6 153 aa20.5■□□□□ 0.87
GTF2F1-203ENST00000594213 KIF4BQ2VIQ3 1234 aa20.5■□□□□ 0.87
GTF2F1-203ENST00000594213 CCDC184Q52MB2 194 aa20.5■□□□□ 0.87
GTF2F1-203ENST00000594213 ANKRD18AQ8IVF6 992 aa20.5■□□□□ 0.87
GTF2F1-203ENST00000594213 PI4KAP1Q8N8J0 262 aa20.5■□□□□ 0.87
GTF2F1-203ENST00000594213 DCPSQ96C86 337 aaKnown RBP20.5■□□□□ 0.87
GTF2F1-203ENST00000594213 GBA2Q9HCG7 927 aaPredicted RBP20.5■□□□□ 0.87
GTF2F1-203ENST00000594213 ASTN2O75129 1339 aaPredicted RBP20.5■□□□□ 0.87
GTF2F1-203ENST00000594213 CCDC27Q2M243 656 aa20.49■□□□□ 0.87
GTF2F1-203ENST00000594213 RSBN1LQ6PCB5 846 aaPredicted RBP20.49■□□□□ 0.87
GTF2F1-203ENST00000594213 AGBL3Q8NEM8 1001 aa20.49■□□□□ 0.87
GTF2F1-203ENST00000594213 TTLL11Q8NHH1 800 aa20.49■□□□□ 0.87
GTF2F1-203ENST00000594213 XDHP47989 1333 aa20.49■□□□□ 0.87
GTF2F1-203ENST00000594213 WTIPA6NIX2 430 aaPredicted RBP20.48■□□□□ 0.87
GTF2F1-203ENST00000594213 ATP2B4P23634 1241 aa20.48■□□□□ 0.87
GTF2F1-203ENST00000594213 CTSWP56202 376 aa20.48■□□□□ 0.87
GTF2F1-203ENST00000594213 RGMBQ6NW40 437 aa20.48■□□□□ 0.87
GTF2F1-203ENST00000594213 TSR2Q969E8 191 aaKnown RBP20.48■□□□□ 0.87
GTF2F1-203ENST00000594213 SCN9AQ15858 1988 aa20.47■□□□□ 0.87
GTF2F1-203ENST00000594213 WWC1Q8IX03 1113 aa20.47■□□□□ 0.87
GTF2F1-203ENST00000594213 C2orf69Q8N8R5 385 aa20.47■□□□□ 0.87
GTF2F1-203ENST00000594213 BSDC1Q9NW68 430 aaPredicted RBP20.47■□□□□ 0.87
GTF2F1-203ENST00000594213 GGA3Q9NZ52 723 aa20.47■□□□□ 0.87
GTF2F1-203ENST00000594213 MINPP1Q9UNW1 487 aa20.47■□□□□ 0.87
GTF2F1-203ENST00000594213 G3V3G9 751 aa20.46■□□□□ 0.87
GTF2F1-203ENST00000594213 H7C1W4 665 aa20.46■□□□□ 0.87
GTF2F1-203ENST00000594213 DCAF8Q5TAQ9 597 aa20.46■□□□□ 0.87
GTF2F1-203ENST00000594213 G2E3Q7L622 706 aa20.46■□□□□ 0.87
GTF2F1-203ENST00000594213 PODNQ7Z5L7 613 aa20.46■□□□□ 0.87
GTF2F1-203ENST00000594213 CDC5LQ99459 802 aaKnown RBP20.46■□□□□ 0.87
GTF2F1-203ENST00000594213 NEURL1BA8MQ27 555 aa20.45■□□□□ 0.86
GTF2F1-203ENST00000594213 SCARF1Q14162 830 aa20.45■□□□□ 0.86
GTF2F1-203ENST00000594213 SULF1Q8IWU6 871 aa20.45■□□□□ 0.86
GTF2F1-203ENST00000594213 CCDC102AQ96A19 550 aa20.45■□□□□ 0.86
GTF2F1-203ENST00000594213 GREM2Q9H772 168 aa20.45■□□□□ 0.86
GTF2F1-203ENST00000594213 USP17L3A6NCW0 530 aa20.44■□□□□ 0.86
GTF2F1-203ENST00000594213 USP17L4A6NCW7 530 aa20.44■□□□□ 0.86
GTF2F1-203ENST00000594213 CWF19L2Q2TBE0 894 aaKnown RBP20.44■□□□□ 0.86
GTF2F1-203ENST00000594213 NCBP3Q53F19 620 aaKnown RBP20.44■□□□□ 0.86
GTF2F1-203ENST00000594213 USP17L1Q7RTZ2 530 aa20.44■□□□□ 0.86
GTF2F1-203ENST00000594213 USP17L8P0C7I0 530 aa20.43■□□□□ 0.86
GTF2F1-203ENST00000594213 RGS19P49795 217 aa20.43■□□□□ 0.86
GTF2F1-203ENST00000594213 KIF23Q02241 960 aaPredicted RBP20.43■□□□□ 0.86
GTF2F1-203ENST00000594213 TWISTNBQ3B726 338 aaPredicted RBP20.43■□□□□ 0.86
GTF2F1-203ENST00000594213 ANGEL2Q5VTE6 544 aaKnown RBP20.43■□□□□ 0.86
GTF2F1-203ENST00000594213 CDCA5Q96FF9 252 aa20.43■□□□□ 0.86
GTF2F1-203ENST00000594213 STK31Q9BXU1 1019 aa20.43■□□□□ 0.86
GTF2F1-203ENST00000594213 MCOLN1Q9GZU1 580 aa20.43■□□□□ 0.86
GTF2F1-203ENST00000594213 IL16Q14005 1332 aa20.43■□□□□ 0.86
GTF2F1-203ENST00000594213 SLC4A2P04920 1241 aa20.42■□□□□ 0.86
GTF2F1-203ENST00000594213 ZNF157P51786 506 aaPredicted RBP20.42■□□□□ 0.86
GTF2F1-203ENST00000594213 CASP7P55210 303 aa20.42■□□□□ 0.86
GTF2F1-203ENST00000594213 NEXNQ0ZGT2 675 aa20.42■□□□□ 0.86
GTF2F1-203ENST00000594213 PLA2G12BQ9BX93 195 aa20.42■□□□□ 0.86
GTF2F1-203ENST00000594213 MYOZ2Q9NPC6 264 aa20.42■□□□□ 0.86
GTF2F1-203ENST00000594213 MED23Q9ULK4 1368 aa20.42■□□□□ 0.86
GTF2F1-203ENST00000594213 SLC10A3P09131 477 aa20.41■□□□□ 0.86
GTF2F1-203ENST00000594213 CCT4P50991 539 aaKnown RBP20.41■□□□□ 0.86
GTF2F1-203ENST00000594213 DACT2Q5SW24 774 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms