RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 ZC3H4Q9UPT8 1303 aaKnown RBP26.67■■□□□ 1.86
ATG4D-212ENST00000590096 VPS33BQ9H267 617 aa26.66■■□□□ 1.86
ATG4D-212ENST00000590096 PODXL2Q9NZ53 605 aa26.66■■□□□ 1.86
ATG4D-212ENST00000590096 XDHP47989 1333 aa26.65■■□□□ 1.86
ATG4D-212ENST00000590096 C6orf229H3BNL8 230 aa26.65■■□□□ 1.86
ATG4D-212ENST00000590096 PPIP5K2O43314 1243 aa26.65■■□□□ 1.86
ATG4D-212ENST00000590096 GNAI2P04899 355 aa26.65■■□□□ 1.86
ATG4D-212ENST00000590096 LARGE2Q8N3Y3 721 aa26.65■■□□□ 1.86
ATG4D-212ENST00000590096 JDP2Q8WYK2 163 aa26.65■■□□□ 1.86
ATG4D-212ENST00000590096 ZNF594Q96JF6 807 aaPredicted RBP26.65■■□□□ 1.86
ATG4D-212ENST00000590096 GGA1Q9UJY5 639 aa26.65■■□□□ 1.86
ATG4D-212ENST00000590096 MINPP1Q9UNW1 487 aa26.65■■□□□ 1.86
ATG4D-212ENST00000590096 DUOX1Q9NRD9 1551 aa26.64■■□□□ 1.86
ATG4D-212ENST00000590096 LDHAL6AQ6ZMR3 332 aa26.64■■□□□ 1.86
ATG4D-212ENST00000590096 CNNM1Q9NRU3 951 aa26.64■■□□□ 1.86
ATG4D-212ENST00000590096 LTBP1Q14766 1721 aa26.64■■□□□ 1.85
ATG4D-212ENST00000590096 UFL1O94874 794 aa26.63■■□□□ 1.85
ATG4D-212ENST00000590096 EYA3Q99504 573 aa26.63■■□□□ 1.85
ATG4D-212ENST00000590096 ANKRD2Q9GZV1 360 aa26.63■■□□□ 1.85
ATG4D-212ENST00000590096 AOC3Q16853 763 aa26.62■■□□□ 1.85
ATG4D-212ENST00000590096 TBC1D16Q8TBP0 767 aa26.62■■□□□ 1.85
ATG4D-212ENST00000590096 POLLQ9UGP5 575 aa26.62■■□□□ 1.85
ATG4D-212ENST00000590096 ATP2B4P23634 1241 aa26.61■■□□□ 1.85
ATG4D-212ENST00000590096 PDE3AQ14432 1141 aa26.61■■□□□ 1.85
ATG4D-212ENST00000590096 WASHC4Q2M389 1173 aa26.61■■□□□ 1.85
ATG4D-212ENST00000590096 ZBTB7BO15156 539 aaPredicted RBP26.6■■□□□ 1.85
ATG4D-212ENST00000590096 CHRNDQ07001 517 aa26.6■■□□□ 1.85
ATG4D-212ENST00000590096 KIAA2012Q0VF49 1180 aa26.6■■□□□ 1.85
ATG4D-212ENST00000590096 MVPQ14764 893 aaKnown RBP26.6■■□□□ 1.85
ATG4D-212ENST00000590096 NIM1KQ8IY84 436 aa26.6■■□□□ 1.85
ATG4D-212ENST00000590096 COG6Q9Y2V7 657 aa26.6■■□□□ 1.85
ATG4D-212ENST00000590096 CEP350Q5VT06 3117 aa26.59■■□□□ 1.85
ATG4D-212ENST00000590096 DDX19BQ9UMR2 479 aa26.59■■□□□ 1.85
ATG4D-212ENST00000590096 DPY19L2Q6NUT2 758 aa26.58■■□□□ 1.85
ATG4D-212ENST00000590096 ZNF526Q8TF50 670 aaPredicted RBP26.58■■□□□ 1.85
ATG4D-212ENST00000590096 RIMBP2O15034 1052 aa26.57■■□□□ 1.84
ATG4D-212ENST00000590096 KCNJ4P48050 445 aa26.57■■□□□ 1.84
ATG4D-212ENST00000590096 RRP1P56182 461 aaKnown RBP26.57■■□□□ 1.84
ATG4D-212ENST00000590096 KLHDC4Q8TBB5 520 aa26.57■■□□□ 1.84
ATG4D-212ENST00000590096 GPR101Q96P66 508 aaPredicted RBP26.57■■□□□ 1.84
ATG4D-212ENST00000590096 ZC3H12CQ9C0D7 883 aaKnown RBP26.57■■□□□ 1.84
ATG4D-212ENST00000590096 CHMP4BQ9H444 224 aaKnown RBP26.57■■□□□ 1.84
ATG4D-212ENST00000590096 LEMD3Q9Y2U8 911 aa26.57■■□□□ 1.84
ATG4D-212ENST00000590096 COL4A5P29400 1685 aa26.57■■□□□ 1.84
ATG4D-212ENST00000590096 SRGAP3O43295 1099 aa26.56■■□□□ 1.84
ATG4D-212ENST00000590096 RFX5P48382 616 aaPredicted RBP26.56■■□□□ 1.84
ATG4D-212ENST00000590096 MTX1Q13505 466 aa26.56■■□□□ 1.84
ATG4D-212ENST00000590096 PUS3Q9BZE2 481 aaKnown RBP26.56■■□□□ 1.84
ATG4D-212ENST00000590096 KDM2BQ8NHM5 1336 aa26.56■■□□□ 1.84
ATG4D-212ENST00000590096 GLTPD2A6NH11 291 aa26.55■■□□□ 1.84
ATG4D-212ENST00000590096 FZD9O00144 591 aa26.55■■□□□ 1.84
ATG4D-212ENST00000590096 EIF6P56537 245 aaKnown RBP26.55■■□□□ 1.84
ATG4D-212ENST00000590096 PTPN12Q05209 780 aaKnown RBP26.55■■□□□ 1.84
ATG4D-212ENST00000590096 C20orf194Q5TEA3 1177 aa26.55■■□□□ 1.84
ATG4D-212ENST00000590096 HELBQ8NG08 1087 aaPredicted RBP26.55■■□□□ 1.84
ATG4D-212ENST00000590096 C1orf115Q9H7X2 142 aa26.55■■□□□ 1.84
ATG4D-212ENST00000590096 GPBP1L1Q9HC44 474 aaPredicted RBP26.55■■□□□ 1.84
ATG4D-212ENST00000590096 MROH5Q6ZUA9 1318 aa26.55■■□□□ 1.84
ATG4D-212ENST00000590096 A0A1B0GUL6 1792 aa26.55■■□□□ 1.84
ATG4D-212ENST00000590096 G3V3G9 751 aa26.54■■□□□ 1.84
ATG4D-212ENST00000590096 TAF5LO75529 589 aa26.54■■□□□ 1.84
ATG4D-212ENST00000590096 DCAF8Q5TAQ9 597 aa26.54■■□□□ 1.84
ATG4D-212ENST00000590096 RIPOR2Q9Y4F9 1068 aa26.54■■□□□ 1.84
ATG4D-212ENST00000590096 ZNF804BA4D1E1 1349 aa26.54■■□□□ 1.84
ATG4D-212ENST00000590096 LRRC24Q50LG9 513 aa26.53■■□□□ 1.84
ATG4D-212ENST00000590096 ZNRF3Q9ULT6 936 aa26.53■■□□□ 1.84
ATG4D-212ENST00000590096 MED23Q9ULK4 1368 aa26.53■■□□□ 1.84
ATG4D-212ENST00000590096 EYA2O00167 538 aa26.52■■□□□ 1.84
ATG4D-212ENST00000590096 METTL24Q5JXM2 366 aa26.52■■□□□ 1.84
ATG4D-212ENST00000590096 ZNF541Q9H0D2 1346 aa26.52■■□□□ 1.84
ATG4D-212ENST00000590096 SIL1Q9H173 461 aa26.52■■□□□ 1.84
ATG4D-212ENST00000590096 FBXO3Q9UK99 471 aa26.52■■□□□ 1.84
ATG4D-212ENST00000590096 DBNDD1Q9H9R9 158 aa26.51■■□□□ 1.83
ATG4D-212ENST00000590096 WTIPA6NIX2 430 aaPredicted RBP26.5■■□□□ 1.83
ATG4D-212ENST00000590096 DOK7Q18PE1 504 aa26.5■■□□□ 1.83
ATG4D-212ENST00000590096 COPRSQ9NQ92 184 aa26.5■■□□□ 1.83
ATG4D-212ENST00000590096 PA2G4Q9UQ80 394 aaKnown RBP26.5■■□□□ 1.83
ATG4D-212ENST00000590096 PNMA6EA0A0J9YXQ4 647 aa26.49■■□□□ 1.83
ATG4D-212ENST00000590096 ECE2O60344 883 aa26.49■■□□□ 1.83
ATG4D-212ENST00000590096 ATP8B2P98198 1209 aa26.49■■□□□ 1.83
ATG4D-212ENST00000590096 CIAO1O76071 339 aa26.48■■□□□ 1.83
ATG4D-212ENST00000590096 DDNO94850 711 aaPredicted RBP26.48■■□□□ 1.83
ATG4D-212ENST00000590096 UBE4AQ14139 1066 aa26.47■■□□□ 1.83
ATG4D-212ENST00000590096 GPC2Q8N158 579 aa26.47■■□□□ 1.83
ATG4D-212ENST00000590096 ZBTB40Q9NUA8 1239 aa26.47■■□□□ 1.83
ATG4D-212ENST00000590096 GJA3Q9Y6H8 435 aa26.47■■□□□ 1.83
ATG4D-212ENST00000590096 YDJCA8MPS7 323 aa26.46■■□□□ 1.83
ATG4D-212ENST00000590096 SNAP23O00161 211 aa26.46■■□□□ 1.83
ATG4D-212ENST00000590096 IL15P40933 162 aaPredicted RBP26.46■■□□□ 1.83
ATG4D-212ENST00000590096 ATG9AQ7Z3C6 839 aa26.46■■□□□ 1.83
ATG4D-212ENST00000590096 PDE8BO95263 885 aa26.45■■□□□ 1.82
ATG4D-212ENST00000590096 CXCL9Q07325 125 aa26.45■■□□□ 1.82
ATG4D-212ENST00000590096 TNIP1Q15025 636 aa26.45■■□□□ 1.82
ATG4D-212ENST00000590096 CIAPIN1Q6FI81 312 aa26.45■■□□□ 1.82
ATG4D-212ENST00000590096 CEP85Q6P2H3 762 aa26.45■■□□□ 1.82
ATG4D-212ENST00000590096 NMRK2Q9NPI5 230 aa26.45■■□□□ 1.82
ATG4D-212ENST00000590096 WDR90Q96KV7 1748 aa26.45■■□□□ 1.82
ATG4D-212ENST00000590096 RAD17O75943 681 aa26.44■■□□□ 1.82
ATG4D-212ENST00000590096 KLRK1P26718 216 aa26.44■■□□□ 1.82
ATG4D-212ENST00000590096 POLA2Q14181 598 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms