RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 SBF1O95248 1867 aa26.83■■□□□ 1.89
RETREG3-204ENST00000586796 LRRC37AA6NMS7 1700 aa26.83■■□□□ 1.89
RETREG3-204ENST00000586796 ZBTB7BO15156 539 aaPredicted RBP26.83■■□□□ 1.89
RETREG3-204ENST00000586796 AOC3Q16853 763 aa26.83■■□□□ 1.89
RETREG3-204ENST00000586796 KLHDC4Q8TBB5 520 aa26.83■■□□□ 1.89
RETREG3-204ENST00000586796 GPR101Q96P66 508 aaPredicted RBP26.83■■□□□ 1.89
RETREG3-204ENST00000586796 RTFDC1Q9BY42 306 aaPredicted RBP26.83■■□□□ 1.89
RETREG3-204ENST00000586796 POLLQ9UGP5 575 aa26.83■■□□□ 1.89
RETREG3-204ENST00000586796 PPIP5K2O43314 1243 aa26.82■■□□□ 1.88
RETREG3-204ENST00000586796 UFL1O94874 794 aa26.82■■□□□ 1.88
RETREG3-204ENST00000586796 MVPQ14764 893 aaKnown RBP26.82■■□□□ 1.88
RETREG3-204ENST00000586796 LARGE2Q8N3Y3 721 aa26.82■■□□□ 1.88
RETREG3-204ENST00000586796 TBC1D16Q8TBP0 767 aa26.82■■□□□ 1.88
RETREG3-204ENST00000586796 C1orf115Q9H7X2 142 aa26.82■■□□□ 1.88
RETREG3-204ENST00000586796 GGA1Q9UJY5 639 aa26.82■■□□□ 1.88
RETREG3-204ENST00000586796 CCDC88AQ3V6T2 1871 aa26.81■■□□□ 1.88
RETREG3-204ENST00000586796 RIMBP2O15034 1052 aa26.81■■□□□ 1.88
RETREG3-204ENST00000586796 ZNF526Q8TF50 670 aaPredicted RBP26.81■■□□□ 1.88
RETREG3-204ENST00000586796 PUS3Q9BZE2 481 aaKnown RBP26.81■■□□□ 1.88
RETREG3-204ENST00000586796 XDHP47989 1333 aa26.81■■□□□ 1.88
RETREG3-204ENST00000586796 RRP1P56182 461 aaKnown RBP26.8■■□□□ 1.88
RETREG3-204ENST00000586796 CHRNDQ07001 517 aa26.8■■□□□ 1.88
RETREG3-204ENST00000586796 PDE3AQ14432 1141 aa26.8■■□□□ 1.88
RETREG3-204ENST00000586796 HELBQ8NG08 1087 aaPredicted RBP26.8■■□□□ 1.88
RETREG3-204ENST00000586796 PODXL2Q9NZ53 605 aa26.8■■□□□ 1.88
RETREG3-204ENST00000586796 JDP2Q8WYK2 163 aa26.79■■□□□ 1.88
RETREG3-204ENST00000586796 ANKRD2Q9GZV1 360 aa26.79■■□□□ 1.88
RETREG3-204ENST00000586796 WTIPA6NIX2 430 aaPredicted RBP26.78■■□□□ 1.88
RETREG3-204ENST00000586796 TAF5LO75529 589 aa26.78■■□□□ 1.88
RETREG3-204ENST00000586796 ATP2B4P23634 1241 aa26.78■■□□□ 1.88
RETREG3-204ENST00000586796 RFX5P48382 616 aaPredicted RBP26.78■■□□□ 1.88
RETREG3-204ENST00000586796 WASHC4Q2M389 1173 aa26.78■■□□□ 1.88
RETREG3-204ENST00000586796 EYA3Q99504 573 aa26.78■■□□□ 1.88
RETREG3-204ENST00000586796 DUOX1Q9NRD9 1551 aa26.78■■□□□ 1.88
RETREG3-204ENST00000586796 SRGAP3O43295 1099 aa26.77■■□□□ 1.88
RETREG3-204ENST00000586796 LRRC24Q50LG9 513 aa26.77■■□□□ 1.88
RETREG3-204ENST00000586796 NIM1KQ8IY84 436 aa26.77■■□□□ 1.88
RETREG3-204ENST00000586796 DDX19BQ9UMR2 479 aa26.77■■□□□ 1.88
RETREG3-204ENST00000586796 KCNJ4P48050 445 aa26.76■■□□□ 1.87
RETREG3-204ENST00000586796 KIAA2012Q0VF49 1180 aa26.76■■□□□ 1.87
RETREG3-204ENST00000586796 VPS33BQ9H267 617 aa26.76■■□□□ 1.87
RETREG3-204ENST00000586796 PTPN12Q05209 780 aaKnown RBP26.75■■□□□ 1.87
RETREG3-204ENST00000586796 ZC3H12CQ9C0D7 883 aaKnown RBP26.75■■□□□ 1.87
RETREG3-204ENST00000586796 SIL1Q9H173 461 aa26.75■■□□□ 1.87
RETREG3-204ENST00000586796 TIAM2Q8IVF5 1701 aa26.75■■□□□ 1.87
RETREG3-204ENST00000586796 COL4A5P29400 1685 aa26.74■■□□□ 1.87
RETREG3-204ENST00000586796 ZNF784Q8NCA9 323 aaPredicted RBP26.74■■□□□ 1.87
RETREG3-204ENST00000586796 PA2G4Q9UQ80 394 aaKnown RBP26.74■■□□□ 1.87
RETREG3-204ENST00000586796 RIPOR2Q9Y4F9 1068 aa26.74■■□□□ 1.87
RETREG3-204ENST00000586796 LTBP1Q14766 1721 aa26.73■■□□□ 1.87
RETREG3-204ENST00000586796 ZC3H4Q9UPT8 1303 aaKnown RBP26.73■■□□□ 1.87
RETREG3-204ENST00000586796 G3V3G9 751 aa26.73■■□□□ 1.87
RETREG3-204ENST00000586796 SNAP23O00161 211 aa26.73■■□□□ 1.87
RETREG3-204ENST00000586796 DOK7Q18PE1 504 aa26.73■■□□□ 1.87
RETREG3-204ENST00000586796 DCAF8Q5TAQ9 597 aa26.73■■□□□ 1.87
RETREG3-204ENST00000586796 LEMD3Q9Y2U8 911 aa26.73■■□□□ 1.87
RETREG3-204ENST00000586796 ZNF804BA4D1E1 1349 aa26.72■■□□□ 1.87
RETREG3-204ENST00000586796 PNMA6EA0A0J9YXQ4 647 aa26.72■■□□□ 1.87
RETREG3-204ENST00000586796 MTX1Q13505 466 aa26.72■■□□□ 1.87
RETREG3-204ENST00000586796 METTL24Q5JXM2 366 aa26.72■■□□□ 1.87
RETREG3-204ENST00000586796 DPY19L2Q6NUT2 758 aa26.72■■□□□ 1.87
RETREG3-204ENST00000586796 DBNDD1Q9H9R9 158 aa26.72■■□□□ 1.87
RETREG3-204ENST00000586796 ZNF541Q9H0D2 1346 aa26.71■■□□□ 1.87
RETREG3-204ENST00000586796 DICER1Q9UPY3 1922 aaKnown RBP26.71■■□□□ 1.87
RETREG3-204ENST00000586796 EYA2O00167 538 aa26.71■■□□□ 1.87
RETREG3-204ENST00000586796 MROH5Q6ZUA9 1318 aa26.7■■□□□ 1.87
RETREG3-204ENST00000586796 FZD9O00144 591 aa26.7■■□□□ 1.86
RETREG3-204ENST00000586796 EIF6P56537 245 aaKnown RBP26.7■■□□□ 1.86
RETREG3-204ENST00000586796 ATP8B2P98198 1209 aa26.7■■□□□ 1.86
RETREG3-204ENST00000586796 CHMP4BQ9H444 224 aaKnown RBP26.7■■□□□ 1.86
RETREG3-204ENST00000586796 GLTPD2A6NH11 291 aa26.69■■□□□ 1.86
RETREG3-204ENST00000586796 DDNO94850 711 aaPredicted RBP26.69■■□□□ 1.86
RETREG3-204ENST00000586796 KLRK1P26718 216 aa26.69■■□□□ 1.86
RETREG3-204ENST00000586796 GPBP1L1Q9HC44 474 aaPredicted RBP26.69■■□□□ 1.86
RETREG3-204ENST00000586796 ZBTB40Q9NUA8 1239 aa26.69■■□□□ 1.86
RETREG3-204ENST00000586796 ZNRF3Q9ULT6 936 aa26.69■■□□□ 1.86
RETREG3-204ENST00000586796 SUPT16HQ9Y5B9 1047 aaKnown RBP26.69■■□□□ 1.86
RETREG3-204ENST00000586796 KDM2BQ8NHM5 1336 aa26.68■■□□□ 1.86
RETREG3-204ENST00000586796 COPRSQ9NQ92 184 aa26.68■■□□□ 1.86
RETREG3-204ENST00000586796 GJA3Q9Y6H8 435 aa26.68■■□□□ 1.86
RETREG3-204ENST00000586796 ECE2O60344 883 aa26.67■■□□□ 1.86
RETREG3-204ENST00000586796 CEP85Q6P2H3 762 aa26.67■■□□□ 1.86
RETREG3-204ENST00000586796 ATG9AQ7Z3C6 839 aa26.67■■□□□ 1.86
RETREG3-204ENST00000586796 TXNRD3Q86VQ6 643 aa26.67■■□□□ 1.86
RETREG3-204ENST00000586796 YDJCA8MPS7 323 aa26.66■■□□□ 1.86
RETREG3-204ENST00000586796 RAD17O75943 681 aa26.66■■□□□ 1.86
RETREG3-204ENST00000586796 MED23Q9ULK4 1368 aa26.66■■□□□ 1.86
RETREG3-204ENST00000586796 CIAO1O76071 339 aa26.65■■□□□ 1.86
RETREG3-204ENST00000586796 PDE8BO95263 885 aa26.64■■□□□ 1.86
RETREG3-204ENST00000586796 CXCL9Q07325 125 aa26.64■■□□□ 1.86
RETREG3-204ENST00000586796 POLA2Q14181 598 aa26.64■■□□□ 1.86
RETREG3-204ENST00000586796 SSH3Q8TE77 659 aa26.64■■□□□ 1.86
RETREG3-204ENST00000586796 CRBNQ96SW2 442 aa26.64■■□□□ 1.86
RETREG3-204ENST00000586796 RRAGCQ9HB90 399 aa26.64■■□□□ 1.86
RETREG3-204ENST00000586796 NMRK2Q9NPI5 230 aa26.64■■□□□ 1.86
RETREG3-204ENST00000586796 FBXO3Q9UK99 471 aa26.64■■□□□ 1.86
RETREG3-204ENST00000586796 IL15P40933 162 aaPredicted RBP26.63■■□□□ 1.85
RETREG3-204ENST00000586796 UBE4AQ14139 1066 aa26.63■■□□□ 1.85
RETREG3-204ENST00000586796 VGLL2Q8N8G2 317 aa26.63■■□□□ 1.85
RETREG3-204ENST00000586796 KCNQ5Q9NR82 932 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms