RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 TRIM35Q9UPQ4 493 aa16.94■□□□□ 0.3
CDK5RAP3-234ENST00000584525 ADM5C9JUS6 153 aa16.93■□□□□ 0.3
CDK5RAP3-234ENST00000584525 G3V3G9 751 aa16.93■□□□□ 0.3
CDK5RAP3-234ENST00000584525 HOXB7P09629 217 aa16.93■□□□□ 0.3
CDK5RAP3-234ENST00000584525 RGS19P49795 217 aa16.93■□□□□ 0.3
CDK5RAP3-234ENST00000584525 RPS8P62241 208 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-234ENST00000584525 DCAF8Q5TAQ9 597 aa16.93■□□□□ 0.3
CDK5RAP3-234ENST00000584525 RGMBQ6NW40 437 aa16.93■□□□□ 0.3
CDK5RAP3-234ENST00000584525 ZC3H12CQ9C0D7 883 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-234ENST00000584525 GBA2Q9HCG7 927 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-234ENST00000584525 HYPKQ9NX55 129 aa16.93■□□□□ 0.3
CDK5RAP3-234ENST00000584525 TBC1D16Q8TBP0 767 aa16.92■□□□□ 0.3
CDK5RAP3-234ENST00000584525 ZNF157P51786 506 aaPredicted RBP16.91■□□□□ 0.3
CDK5RAP3-234ENST00000584525 TRIM28Q13263 835 aaKnown RBP16.91■□□□□ 0.3
CDK5RAP3-234ENST00000584525 DUSP27Q5VZP5 1158 aa16.91■□□□□ 0.3
CDK5RAP3-234ENST00000584525 RIC3Q7Z5B4 369 aa16.91■□□□□ 0.3
CDK5RAP3-234ENST00000584525 CCDC102AQ96A19 550 aa16.91■□□□□ 0.3
CDK5RAP3-234ENST00000584525 ANKIB1Q9P2G1 1089 aa16.91■□□□□ 0.3
CDK5RAP3-234ENST00000584525 RTL9Q8NET4 1388 aa16.9■□□□□ 0.3
CDK5RAP3-234ENST00000584525 DUOX1Q9NRD9 1551 aa16.9■□□□□ 0.3
CDK5RAP3-234ENST00000584525 FAM155AB1AL88 458 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP3-234ENST00000584525 KIF4BQ2VIQ3 1234 aa16.9■□□□□ 0.3
CDK5RAP3-234ENST00000584525 SULF1Q8IWU6 871 aa16.9■□□□□ 0.3
CDK5RAP3-234ENST00000584525 UFL1O94874 794 aa16.89■□□□□ 0.29
CDK5RAP3-234ENST00000584525 SLC34A2O95436 690 aa16.89■□□□□ 0.29
CDK5RAP3-234ENST00000584525 VIL1P09327 827 aaKnown RBP16.89■□□□□ 0.29
CDK5RAP3-234ENST00000584525 KIF23Q02241 960 aaPredicted RBP16.89■□□□□ 0.29
CDK5RAP3-234ENST00000584525 GOLGA2Q08379 1002 aa16.89■□□□□ 0.29
CDK5RAP3-234ENST00000584525 ZBTB38Q8NAP3 1195 aaPredicted RBP16.89■□□□□ 0.29
CDK5RAP3-234ENST00000584525 SEC31BQ9NQW1 1179 aa16.89■□□□□ 0.29
CDK5RAP3-234ENST00000584525 GGA3Q9NZ52 723 aa16.89■□□□□ 0.29
CDK5RAP3-234ENST00000584525 SALL2Q9Y467 1007 aaPredicted RBP16.89■□□□□ 0.29
CDK5RAP3-234ENST00000584525 TRPM7Q96QT4 1865 aa16.88■□□□□ 0.29
CDK5RAP3-234ENST00000584525 HSP90B1P14625 803 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP3-234ENST00000584525 GNAI1P63096 354 aa16.88■□□□□ 0.29
CDK5RAP3-234ENST00000584525 GGA1Q9UJY5 639 aa16.88■□□□□ 0.29
CDK5RAP3-234ENST00000584525 CCER2I3L3R5 266 aa16.87■□□□□ 0.29
CDK5RAP3-234ENST00000584525 CCDC152Q4G0S7 254 aa16.87■□□□□ 0.29
CDK5RAP3-234ENST00000584525 CCDC85AQ96PX6 553 aaPredicted RBP16.87■□□□□ 0.29
CDK5RAP3-234ENST00000584525 MBIPQ9NS73 344 aa16.87■□□□□ 0.29
CDK5RAP3-234ENST00000584525 SAGE1Q9NXZ1 904 aa16.87■□□□□ 0.29
CDK5RAP3-234ENST00000584525 PODXL2Q9NZ53 605 aa16.87■□□□□ 0.29
CDK5RAP3-234ENST00000584525 TRPA1O75762 1119 aa16.86■□□□□ 0.29
CDK5RAP3-234ENST00000584525 JARID2Q92833 1246 aaPredicted RBP16.86■□□□□ 0.29
CDK5RAP3-234ENST00000584525 CDCA5Q96FF9 252 aa16.86■□□□□ 0.29
CDK5RAP3-234ENST00000584525 MYD88Q99836 296 aa16.86■□□□□ 0.29
CDK5RAP3-234ENST00000584525 PHAXQ9H814 394 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP3-234ENST00000584525 RNF186Q9NXI6 227 aa16.86■□□□□ 0.29
CDK5RAP3-234ENST00000584525 ASTN2O75129 1339 aaPredicted RBP16.86■□□□□ 0.29
CDK5RAP3-234ENST00000584525 ANKRD36CQ5JPF3 1778 aa16.86■□□□□ 0.29
CDK5RAP3-234ENST00000584525 ELL2O00472 640 aaPredicted RBP16.85■□□□□ 0.29
CDK5RAP3-234ENST00000584525 SCARF1Q14162 830 aa16.85■□□□□ 0.29
CDK5RAP3-234ENST00000584525 ANGEL2Q5VTE6 544 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-234ENST00000584525 RSBN1LQ6PCB5 846 aaPredicted RBP16.85■□□□□ 0.29
CDK5RAP3-234ENST00000584525 IFT57Q9NWB7 429 aa16.85■□□□□ 0.29
CDK5RAP3-234ENST00000584525 SLC10A3P09131 477 aa16.84■□□□□ 0.29
CDK5RAP3-234ENST00000584525 ZNF280AP59817 542 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-234ENST00000584525 CCDC191Q8NCU4 936 aa16.84■□□□□ 0.29
CDK5RAP3-234ENST00000584525 AGBL3Q8NEM8 1001 aa16.84■□□□□ 0.29
CDK5RAP3-234ENST00000584525 LAMB2P55268 1798 aa16.84■□□□□ 0.29
CDK5RAP3-234ENST00000584525 PDE8AO60658 829 aa16.83■□□□□ 0.28
CDK5RAP3-234ENST00000584525 PCCAP05165 728 aaPredicted RBP16.83■□□□□ 0.28
CDK5RAP3-234ENST00000584525 CCDC27Q2M243 656 aa16.83■□□□□ 0.28
CDK5RAP3-234ENST00000584525 ANKRD18AQ8IVF6 992 aa16.83■□□□□ 0.28
CDK5RAP3-234ENST00000584525 CSRNP1Q96S65 589 aa16.83■□□□□ 0.28
CDK5RAP3-234ENST00000584525 CWC25Q9NXE8 425 aaPredicted RBP16.83■□□□□ 0.28
CDK5RAP3-234ENST00000584525 USP17L8P0C7I0 530 aa16.82■□□□□ 0.28
CDK5RAP3-234ENST00000584525 ZNF853P0CG23 659 aa16.82■□□□□ 0.28
CDK5RAP3-234ENST00000584525 CHMP4AQ9BY43 222 aa16.82■□□□□ 0.28
CDK5RAP3-234ENST00000584525 LRRC37AA6NMS7 1700 aa16.82■□□□□ 0.28
CDK5RAP3-234ENST00000584525 COL4A1P02462 1669 aa16.81■□□□□ 0.28
CDK5RAP3-234ENST00000584525 XDHP47989 1333 aa16.81■□□□□ 0.28
CDK5RAP3-234ENST00000584525 DDX58O95786 925 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-234ENST00000584525 ATP2B4P23634 1241 aa16.81■□□□□ 0.28
CDK5RAP3-234ENST00000584525 REM2Q8IYK8 340 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP3-234ENST00000584525 MYOZ2Q9NPC6 264 aa16.81■□□□□ 0.28
CDK5RAP3-234ENST00000584525 TAF1P21675 1872 aa16.8■□□□□ 0.28
CDK5RAP3-234ENST00000584525 USP17L3A6NCW0 530 aa16.8■□□□□ 0.28
CDK5RAP3-234ENST00000584525 USP17L4A6NCW7 530 aa16.8■□□□□ 0.28
CDK5RAP3-234ENST00000584525 SOX10P56693 466 aa16.8■□□□□ 0.28
CDK5RAP3-234ENST00000584525 FKBP1BP68106 108 aa16.8■□□□□ 0.28
CDK5RAP3-234ENST00000584525 NCBP3Q53F19 620 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-234ENST00000584525 USP17L1Q7RTZ2 530 aa16.8■□□□□ 0.28
CDK5RAP3-234ENST00000584525 RASAL3Q86YV0 1011 aa16.8■□□□□ 0.28
CDK5RAP3-234ENST00000584525 WWC1Q8IX03 1113 aa16.8■□□□□ 0.28
CDK5RAP3-234ENST00000584525 METTL22Q9BUU2 404 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-234ENST00000584525 SCAF8Q9UPN6 1271 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-234ENST00000584525 DDX60Q8IY21 1712 aaKnown RBP16.79■□□□□ 0.28
CDK5RAP3-234ENST00000584525 PODNQ7Z5L7 613 aa16.79■□□□□ 0.28
CDK5RAP3-234ENST00000584525 C8orf58Q8NAV2 365 aa16.79■□□□□ 0.28
CDK5RAP3-234ENST00000584525 GMLQ99445 158 aa16.79■□□□□ 0.28
CDK5RAP3-234ENST00000584525 CDC5LQ99459 802 aaKnown RBP16.79■□□□□ 0.28
CDK5RAP3-234ENST00000584525 UBE2Q2LH0YL09 131 aa16.78■□□□□ 0.28
CDK5RAP3-234ENST00000584525 CCDC30Q5VVM6 783 aa16.78■□□□□ 0.28
CDK5RAP3-234ENST00000584525 MOB2Q70IA6 237 aa16.78■□□□□ 0.28
CDK5RAP3-234ENST00000584525 CTU1Q7Z7A3 348 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-234ENST00000584525 FBXW7Q969H0 707 aa16.78■□□□□ 0.28
CDK5RAP3-234ENST00000584525 IL16Q14005 1332 aa16.77■□□□□ 0.28
CDK5RAP3-234ENST00000584525 PITPNM2Q9BZ72 1349 aa16.77■□□□□ 0.28
CDK5RAP3-234ENST00000584525 WTIPA6NIX2 430 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms