RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 SRGAP3O43295 1099 aa15.56■□□□□ 0.08
SRSF1-204ENST00000581979 SUCLG2Q96I99 432 aa15.56■□□□□ 0.08
SRSF1-204ENST00000581979 CWC25Q9NXE8 425 aaPredicted RBP15.56■□□□□ 0.08
SRSF1-204ENST00000581979 LAMB2P55268 1798 aa15.56■□□□□ 0.08
SRSF1-204ENST00000581979 APBB1O00213 710 aa15.55■□□□□ 0.08
SRSF1-204ENST00000581979 HCLS1P14317 486 aaPredicted RBP15.55■□□□□ 0.08
SRSF1-204ENST00000581979 SSH3Q8TE77 659 aa15.55■□□□□ 0.08
SRSF1-204ENST00000581979 ATP6V0A2Q9Y487 856 aa15.55■□□□□ 0.08
SRSF1-204ENST00000581979 SCN4AP35499 1836 aa15.55■□□□□ 0.08
SRSF1-204ENST00000581979 ZNF541Q9H0D2 1346 aa15.55■□□□□ 0.08
SRSF1-204ENST00000581979 IQCA1LA6NCM1 817 aa15.54■□□□□ 0.08
SRSF1-204ENST00000581979 TRIM28Q13263 835 aaKnown RBP15.54■□□□□ 0.08
SRSF1-204ENST00000581979 EXOC6BQ9Y2D4 811 aa15.54■□□□□ 0.08
SRSF1-204ENST00000581979 BBOX1O75936 387 aa15.54■□□□□ 0.08
SRSF1-204ENST00000581979 POLA2Q14181 598 aa15.54■□□□□ 0.08
SRSF1-204ENST00000581979 CCDC191Q8NCU4 936 aa15.54■□□□□ 0.08
SRSF1-204ENST00000581979 MTX1Q13505 466 aa15.53■□□□□ 0.08
SRSF1-204ENST00000581979 UBE3BQ7Z3V4 1068 aa15.53■□□□□ 0.08
SRSF1-204ENST00000581979 SLC51AQ86UW1 340 aa15.53■□□□□ 0.08
SRSF1-204ENST00000581979 JDP2Q8WYK2 163 aa15.53■□□□□ 0.08
SRSF1-204ENST00000581979 JARID2Q92833 1246 aaPredicted RBP15.53■□□□□ 0.08
SRSF1-204ENST00000581979 BCL11AQ9H165 835 aa15.53■□□□□ 0.08
SRSF1-204ENST00000581979 BICC1Q9H694 974 aaKnown RBP15.53■□□□□ 0.08
SRSF1-204ENST00000581979 COL4A5P29400 1685 aa15.53■□□□□ 0.08
SRSF1-204ENST00000581979 HTRA3P83110 453 aa15.52■□□□□ 0.08
SRSF1-204ENST00000581979 FAM161AQ3B820 660 aa15.52■□□□□ 0.08
SRSF1-204ENST00000581979 GPC2Q8N158 579 aa15.52■□□□□ 0.08
SRSF1-204ENST00000581979 KAZALD1Q96I82 304 aa15.52■□□□□ 0.08
SRSF1-204ENST00000581979 VPS33BQ9H267 617 aa15.52■□□□□ 0.08
SRSF1-204ENST00000581979 TAF1DQ9H5J8 278 aaPredicted RBP15.52■□□□□ 0.08
SRSF1-204ENST00000581979 DDX60Q8IY21 1712 aaKnown RBP15.52■□□□□ 0.07
SRSF1-204ENST00000581979 H7C1W4 665 aa15.51■□□□□ 0.07
SRSF1-204ENST00000581979 SMARCA5O60264 1052 aaPredicted RBP15.51■□□□□ 0.07
SRSF1-204ENST00000581979 SURF6O75683 361 aaKnown RBP15.51■□□□□ 0.07
SRSF1-204ENST00000581979 CHADLQ6NUI6 762 aa15.51■□□□□ 0.07
SRSF1-204ENST00000581979 DDX46Q7L014 1031 aaKnown RBP15.51■□□□□ 0.07
SRSF1-204ENST00000581979 SP8Q8IXZ3 490 aa15.51■□□□□ 0.07
SRSF1-204ENST00000581979 RTFDC1Q9BY42 306 aaPredicted RBP15.51■□□□□ 0.07
SRSF1-204ENST00000581979 TMX4Q9H1E5 349 aaPredicted RBP15.51■□□□□ 0.07
SRSF1-204ENST00000581979 POTEIP0CG38 1075 aa15.51■□□□□ 0.07
SRSF1-204ENST00000581979 POTEJP0CG39 1038 aa15.51■□□□□ 0.07
SRSF1-204ENST00000581979 GRAPQ13588 217 aa15.51■□□□□ 0.07
SRSF1-204ENST00000581979 SF3B3Q15393 1217 aaKnown RBP15.51■□□□□ 0.07
SRSF1-204ENST00000581979 GRAPLQ8TC17 118 aaPredicted RBP15.51■□□□□ 0.07
SRSF1-204ENST00000581979 KLRG1Q96E93 195 aa15.51■□□□□ 0.07
SRSF1-204ENST00000581979 FAM89AQ96GI7 184 aa15.51■□□□□ 0.07
SRSF1-204ENST00000581979 BACH2Q9BYV9 841 aa15.51■□□□□ 0.07
SRSF1-204ENST00000581979 LRRCC1Q9C099 1032 aa15.51■□□□□ 0.07
SRSF1-204ENST00000581979 CASP7P55210 303 aa15.5■□□□□ 0.07
SRSF1-204ENST00000581979 LARGE2Q8N3Y3 721 aa15.5■□□□□ 0.07
SRSF1-204ENST00000581979 RBM19Q9Y4C8 960 aaKnown RBP15.5■□□□□ 0.07
SRSF1-204ENST00000581979 RAB11FIP3O75154 756 aa15.49■□□□□ 0.07
SRSF1-204ENST00000581979 EIF6P56537 245 aaKnown RBP15.49■□□□□ 0.07
SRSF1-204ENST00000581979 HSP90AB4PQ58FF6 505 aa15.49■□□□□ 0.07
SRSF1-204ENST00000581979 RTL5Q5HYW3 569 aaPredicted RBP15.49■□□□□ 0.07
SRSF1-204ENST00000581979 TMC4Q7Z404 712 aa15.49■□□□□ 0.07
SRSF1-204ENST00000581979 LDHDQ86WU2 507 aa15.49■□□□□ 0.07
SRSF1-204ENST00000581979 HACL1Q9UJ83 578 aa15.49■□□□□ 0.07
SRSF1-204ENST00000581979 EPHA10Q5JZY3 1008 aa15.48■□□□□ 0.07
SRSF1-204ENST00000581979 JMYQ8N9B5 988 aa15.48■□□□□ 0.07
SRSF1-204ENST00000581979 ZBTB38Q8NAP3 1195 aaPredicted RBP15.48■□□□□ 0.07
SRSF1-204ENST00000581979 SUPT20HQ8NEM7 779 aa15.48■□□□□ 0.07
SRSF1-204ENST00000581979 TAF1P21675 1872 aa15.48■□□□□ 0.07
SRSF1-204ENST00000581979 PPIP5K2O43314 1243 aa15.48■□□□□ 0.07
SRSF1-204ENST00000581979 EPHX2P34913 555 aa15.48■□□□□ 0.07
SRSF1-204ENST00000581979 OS9Q13438 667 aaPredicted RBP15.48■□□□□ 0.07
SRSF1-204ENST00000581979 C8orf34Q49A92 452 aa15.48■□□□□ 0.07
SRSF1-204ENST00000581979 DPP8Q6V1X1 898 aaPredicted RBP15.48■□□□□ 0.07
SRSF1-204ENST00000581979 LRRC37AA6NMS7 1700 aa15.47■□□□□ 0.07
SRSF1-204ENST00000581979 ADAMTSL1Q8N6G6 1762 aa15.47■□□□□ 0.07
SRSF1-204ENST00000581979 IRS4O14654 1257 aaPredicted RBP15.47■□□□□ 0.07
SRSF1-204ENST00000581979 AOC3Q16853 763 aa15.47■□□□□ 0.07
SRSF1-204ENST00000581979 RABL6Q3YEC7 729 aaPredicted RBP15.47■□□□□ 0.07
SRSF1-204ENST00000581979 NIM1KQ8IY84 436 aa15.47■□□□□ 0.07
SRSF1-204ENST00000581979 MPNDQ8N594 471 aa15.47■□□□□ 0.07
SRSF1-204ENST00000581979 NOP58Q9Y2X3 529 aaKnown RBP15.47■□□□□ 0.07
SRSF1-204ENST00000581979 PCCAP05165 728 aaPredicted RBP15.46■□□□□ 0.07
SRSF1-204ENST00000581979 PNMA8AQ86V59 439 aaPredicted RBP15.46■□□□□ 0.07
SRSF1-204ENST00000581979 PLEKHM2Q8IWE5 1019 aa15.46■□□□□ 0.07
SRSF1-204ENST00000581979 KIF1BPQ96EK5 621 aa15.46■□□□□ 0.07
SRSF1-204ENST00000581979 HSP90B1P14625 803 aaKnown RBP15.46■□□□□ 0.06
SRSF1-204ENST00000581979 KIAA2012Q0VF49 1180 aa15.46■□□□□ 0.06
SRSF1-204ENST00000581979 ERC1Q8IUD2 1116 aa15.46■□□□□ 0.06
SRSF1-204ENST00000581979 RHPN1Q8TCX5 695 aa15.46■□□□□ 0.06
SRSF1-204ENST00000581979 PASKQ96RG2 1323 aa15.46■□□□□ 0.06
SRSF1-204ENST00000581979 PA2G4Q9UQ80 394 aaKnown RBP15.46■□□□□ 0.06
SRSF1-204ENST00000581979 CHMP3Q9Y3E7 222 aa15.46■□□□□ 0.06
SRSF1-204ENST00000581979 SCNN1DP51172 638 aa15.45■□□□□ 0.06
SRSF1-204ENST00000581979 FOXO4P98177 505 aa15.45■□□□□ 0.06
SRSF1-204ENST00000581979 G3BP1Q13283 466 aaKnown RBP eCLIP15.45■□□□□ 0.06
SRSF1-204ENST00000581979 EAPPQ56P03 285 aaPredicted RBP15.45■□□□□ 0.06
SRSF1-204ENST00000581979 LMBR1LQ6UX01 489 aa15.45■□□□□ 0.06
SRSF1-204ENST00000581979 CELF1Q92879 486 aaKnown RBP15.45■□□□□ 0.06
SRSF1-204ENST00000581979 ZNRF3Q9ULT6 936 aa15.45■□□□□ 0.06
SRSF1-204ENST00000581979 GJA3Q9Y6H8 435 aa15.45■□□□□ 0.06
SRSF1-204ENST00000581979 DUOX1Q9NRD9 1551 aa15.44■□□□□ 0.06
SRSF1-204ENST00000581979 ITGBL1O95965 494 aaPredicted RBP15.44■□□□□ 0.06
SRSF1-204ENST00000581979 OTUD7AQ8TE49 926 aaPredicted RBP15.44■□□□□ 0.06
SRSF1-204ENST00000581979 IL1RAPL2Q9NP60 686 aa15.44■□□□□ 0.06
SRSF1-204ENST00000581979 CREBZFQ9NS37 354 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms