RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 A0A087WZG4 1122 aa16.15■□□□□ 0.18
RNF43-205ENST00000581868 RBM43Q6ZSC3 357 aaKnown RBP16.14■□□□□ 0.17
RNF43-205ENST00000581868 KRT28Q7Z3Y7 464 aa16.14■□□□□ 0.17
RNF43-205ENST00000581868 NEUROD6Q96NK8 337 aa16.14■□□□□ 0.17
RNF43-205ENST00000581868 FTOQ9C0B1 505 aaKnown RBP eCLIP16.14■□□□□ 0.17
RNF43-205ENST00000581868 STOX1Q6ZVD7 989 aa16.14■□□□□ 0.17
RNF43-205ENST00000581868 CFAP45Q9UL16 551 aa16.14■□□□□ 0.17
RNF43-205ENST00000581868 PPP4R3BQ5MIZ7 849 aa16.13■□□□□ 0.17
RNF43-205ENST00000581868 PLA2G4DQ86XP0 818 aa16.13■□□□□ 0.17
RNF43-205ENST00000581868 TTC5Q8N0Z6 440 aa16.13■□□□□ 0.17
RNF43-205ENST00000581868 TDRD7Q8NHU6 1098 aaKnown RBP16.13■□□□□ 0.17
RNF43-205ENST00000581868 C16orf45Q96MC5 204 aaPredicted RBP16.13■□□□□ 0.17
RNF43-205ENST00000581868 HAUS7Q99871 368 aa16.13■□□□□ 0.17
RNF43-205ENST00000581868 ERBB3P21860 1342 aa16.13■□□□□ 0.17
RNF43-205ENST00000581868 CCT2P78371 535 aaKnown RBP16.13■□□□□ 0.17
RNF43-205ENST00000581868 APOBRQ0VD83 1088 aa16.13■□□□□ 0.17
RNF43-205ENST00000581868 ZSCAN16Q9H4T2 348 aaPredicted RBP16.13■□□□□ 0.17
RNF43-205ENST00000581868 CLIP2Q9UDT6 1046 aa16.13■□□□□ 0.17
RNF43-205ENST00000581868 GOLIM4O00461 696 aa16.12■□□□□ 0.17
RNF43-205ENST00000581868 PHKG2P15735 406 aa16.12■□□□□ 0.17
RNF43-205ENST00000581868 ZSCAN25Q6NSZ9 544 aa16.12■□□□□ 0.17
RNF43-205ENST00000581868 LMBR1LQ6UX01 489 aa16.12■□□□□ 0.17
RNF43-205ENST00000581868 SNRPA1P09661 255 aaKnown RBP16.12■□□□□ 0.17
RNF43-205ENST00000581868 TATP17735 454 aaPredicted RBP16.12■□□□□ 0.17
RNF43-205ENST00000581868 CBX1P83916 185 aa16.12■□□□□ 0.17
RNF43-205ENST00000581868 A0A087WWV3 80 aa16.11■□□□□ 0.17
RNF43-205ENST00000581868 GUCY1B3Q02153 619 aa16.11■□□□□ 0.17
RNF43-205ENST00000581868 CCAR1Q8IX12 1150 aaKnown RBP16.11■□□□□ 0.17
RNF43-205ENST00000581868 NCOA5Q9HCD5 579 aaKnown RBP16.11■□□□□ 0.17
RNF43-205ENST00000581868 KDM6AO15550 1401 aaPredicted RBP16.11■□□□□ 0.17
RNF43-205ENST00000581868 A0A0G2JLW4 131 aa16.11■□□□□ 0.17
RNF43-205ENST00000581868 GOLGA6L19H0YKK7 550 aa16.11■□□□□ 0.17
RNF43-205ENST00000581868 CHST3Q7LGC8 479 aa16.11■□□□□ 0.17
RNF43-205ENST00000581868 PTPDC1A2A3K4 754 aa16.1■□□□□ 0.17
RNF43-205ENST00000581868 PFKFB2O60825 505 aa16.1■□□□□ 0.17
RNF43-205ENST00000581868 CSB-PGBD3P0DP91 1061 aa16.1■□□□□ 0.17
RNF43-205ENST00000581868 MRC1P22897 1456 aa16.1■□□□□ 0.17
RNF43-205ENST00000581868 TIMM10P62072 90 aa16.1■□□□□ 0.17
RNF43-205ENST00000581868 CCDC144BQ3MJ40 725 aa16.1■□□□□ 0.17
RNF43-205ENST00000581868 C11orf57Q6ZUT1 292 aaPredicted RBP16.1■□□□□ 0.17
RNF43-205ENST00000581868 DHX32Q7L7V1 743 aaKnown RBP16.1■□□□□ 0.17
RNF43-205ENST00000581868 LRP10Q7Z4F1 713 aa16.1■□□□□ 0.17
RNF43-205ENST00000581868 CCDC144CPQ8IYA2 1237 aa16.1■□□□□ 0.17
RNF43-205ENST00000581868 KBTBD3Q8NAB2 608 aa16.1■□□□□ 0.17
RNF43-205ENST00000581868 NSUN7Q8NE18 718 aaKnown RBP16.1■□□□□ 0.17
RNF43-205ENST00000581868 CACTINQ8WUQ7 758 aaKnown RBP16.1■□□□□ 0.17
RNF43-205ENST00000581868 PHRF1Q9P1Y6 1649 aaKnown RBP16.1■□□□□ 0.17
RNF43-205ENST00000581868 ADD1P35611 737 aaKnown RBP16.1■□□□□ 0.17
RNF43-205ENST00000581868 RABL6Q3YEC7 729 aaPredicted RBP16.1■□□□□ 0.17
RNF43-205ENST00000581868 PDCL2Q8N4E4 241 aa16.1■□□□□ 0.17
RNF43-205ENST00000581868 SMARCC2Q8TAQ2 1214 aa16.1■□□□□ 0.17
RNF43-205ENST00000581868 CTDNEP1O95476 244 aa16.09■□□□□ 0.17
RNF43-205ENST00000581868 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.09■□□□□ 0.17
RNF43-205ENST00000581868 SMAP1Q8IYB5 467 aaPredicted RBP16.09■□□□□ 0.17
RNF43-205ENST00000581868 FBXW7Q969H0 707 aa16.09■□□□□ 0.17
RNF43-205ENST00000581868 GOLPH3LQ9H4A5 285 aa16.09■□□□□ 0.17
RNF43-205ENST00000581868 SIPA1L3O60292 1781 aaPredicted RBP16.09■□□□□ 0.17
RNF43-205ENST00000581868 ATP2B3Q16720 1220 aa16.09■□□□□ 0.17
RNF43-205ENST00000581868 IFNL2Q8IZJ0 200 aa16.09■□□□□ 0.17
RNF43-205ENST00000581868 USP28Q96RU2 1077 aa16.09■□□□□ 0.17
RNF43-205ENST00000581868 PAG1Q9NWQ8 432 aa16.09■□□□□ 0.17
RNF43-205ENST00000581868 C5P01031 1676 aa16.08■□□□□ 0.17
RNF43-205ENST00000581868 TNNT1P13805 278 aa16.08■□□□□ 0.17
RNF43-205ENST00000581868 ERCC4Q92889 916 aaPredicted RBP16.08■□□□□ 0.17
RNF43-205ENST00000581868 BCL11BQ9C0K0 894 aaPredicted RBP16.08■□□□□ 0.17
RNF43-205ENST00000581868 SLIT3O75094 1523 aa16.08■□□□□ 0.16
RNF43-205ENST00000581868 SPDYE4A6NLX3 237 aa16.08■□□□□ 0.16
RNF43-205ENST00000581868 HMGB1P09429 215 aaKnown RBP16.08■□□□□ 0.16
RNF43-205ENST00000581868 IQCB1Q15051 598 aa16.08■□□□□ 0.16
RNF43-205ENST00000581868 TPD52L1Q16890 204 aaPredicted RBP16.08■□□□□ 0.16
RNF43-205ENST00000581868 CCDC73Q6ZRK6 1079 aa16.08■□□□□ 0.16
RNF43-205ENST00000581868 FMNL2Q96PY5 1086 aa16.08■□□□□ 0.16
RNF43-205ENST00000581868 LLPHQ9BRT6 129 aaKnown RBP16.08■□□□□ 0.16
RNF43-205ENST00000581868 RCOR1Q9UKL0 485 aa16.08■□□□□ 0.16
RNF43-205ENST00000581868 BECN2A8MW95 431 aa16.07■□□□□ 0.16
RNF43-205ENST00000581868 ARID5BQ14865 1188 aa16.07■□□□□ 0.16
RNF43-205ENST00000581868 ME1P48163 572 aa16.07■□□□□ 0.16
RNF43-205ENST00000581868 NAA16Q6N069 864 aaPredicted RBP16.07■□□□□ 0.16
RNF43-205ENST00000581868 SH3TC1Q8TE82 1336 aa16.06■□□□□ 0.16
RNF43-205ENST00000581868 E7EWF7 191 aa16.06■□□□□ 0.16
RNF43-205ENST00000581868 STX1AQ16623 288 aa16.06■□□□□ 0.16
RNF43-205ENST00000581868 ZNF592Q92610 1267 aa16.06■□□□□ 0.16
RNF43-205ENST00000581868 PRDM4Q9UKN5 801 aa16.06■□□□□ 0.16
RNF43-205ENST00000581868 CTIFO43310 598 aaKnown RBP16.06■□□□□ 0.16
RNF43-205ENST00000581868 KINO60870 393 aaKnown RBP16.06■□□□□ 0.16
RNF43-205ENST00000581868 CAVIN2O95810 425 aa16.06■□□□□ 0.16
RNF43-205ENST00000581868 CASP7P55210 303 aa16.06■□□□□ 0.16
RNF43-205ENST00000581868 RFX7Q2KHR2 1363 aa16.06■□□□□ 0.16
RNF43-205ENST00000581868 CYP27B1O15528 508 aa16.05■□□□□ 0.16
RNF43-205ENST00000581868 HSPD1P10809 573 aaKnown RBP16.05■□□□□ 0.16
RNF43-205ENST00000581868 CABP4P57796 275 aa16.05■□□□□ 0.16
RNF43-205ENST00000581868 EXOSC10Q01780 885 aaKnown RBP16.05■□□□□ 0.16
RNF43-205ENST00000581868 SNW1Q13573 536 aaKnown RBP16.05■□□□□ 0.16
RNF43-205ENST00000581868 ATG9AQ7Z3C6 839 aa16.05■□□□□ 0.16
RNF43-205ENST00000581868 FSIP1Q8NA03 581 aa16.05■□□□□ 0.16
RNF43-205ENST00000581868 PLBD2Q8NHP8 589 aa16.05■□□□□ 0.16
RNF43-205ENST00000581868 DDX17Q92841 729 aaKnown RBP16.05■□□□□ 0.16
RNF43-205ENST00000581868 ZNF594Q96JF6 807 aaPredicted RBP16.05■□□□□ 0.16
RNF43-205ENST00000581868 HELLSQ9NRZ9 838 aa16.05■□□□□ 0.16
RNF43-205ENST00000581868 RGPD5Q99666 1765 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms