RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 SPEF2Q9C093 1822 aa32.7■■■□□ 2.83
NME3-209ENST00000566600 GNAI2P04899 355 aa32.7■■■□□ 2.83
NME3-209ENST00000566600 XDHP47989 1333 aa32.7■■■□□ 2.82
NME3-209ENST00000566600 PDE3AQ14432 1141 aa32.69■■■□□ 2.82
NME3-209ENST00000566600 ANKRD2Q9GZV1 360 aa32.69■■■□□ 2.82
NME3-209ENST00000566600 LDHAL6AQ6ZMR3 332 aa32.68■■■□□ 2.82
NME3-209ENST00000566600 JDP2Q8WYK2 163 aa32.68■■■□□ 2.82
NME3-209ENST00000566600 C6orf229H3BNL8 230 aa32.67■■■□□ 2.82
NME3-209ENST00000566600 LARGE2Q8N3Y3 721 aa32.67■■■□□ 2.82
NME3-209ENST00000566600 EYA3Q99504 573 aa32.67■■■□□ 2.82
NME3-209ENST00000566600 GGA1Q9UJY5 639 aa32.67■■■□□ 2.82
NME3-209ENST00000566600 ZBTB7BO15156 539 aaPredicted RBP32.66■■■□□ 2.82
NME3-209ENST00000566600 PPIP5K2O43314 1243 aa32.66■■■□□ 2.82
NME3-209ENST00000566600 TBC1D16Q8TBP0 767 aa32.66■■■□□ 2.82
NME3-209ENST00000566600 ZNF594Q96JF6 807 aaPredicted RBP32.66■■■□□ 2.82
NME3-209ENST00000566600 CNNM1Q9NRU3 951 aa32.66■■■□□ 2.82
NME3-209ENST00000566600 DUOX1Q9NRD9 1551 aa32.66■■■□□ 2.82
NME3-209ENST00000566600 LTBP1Q14766 1721 aa32.65■■■□□ 2.82
NME3-209ENST00000566600 TIAM2Q8IVF5 1701 aa32.65■■■□□ 2.82
NME3-209ENST00000566600 CHMP4BQ9H444 224 aaKnown RBP32.65■■■□□ 2.82
NME3-209ENST00000566600 POLLQ9UGP5 575 aa32.65■■■□□ 2.82
NME3-209ENST00000566600 UFL1O94874 794 aa32.64■■■□□ 2.82
NME3-209ENST00000566600 ATP2B4P23634 1241 aa32.64■■■□□ 2.82
NME3-209ENST00000566600 KIAA2012Q0VF49 1180 aa32.64■■■□□ 2.82
NME3-209ENST00000566600 MVPQ14764 893 aaKnown RBP32.64■■■□□ 2.82
NME3-209ENST00000566600 DDX19BQ9UMR2 479 aa32.64■■■□□ 2.82
NME3-209ENST00000566600 AOC3Q16853 763 aa32.63■■■□□ 2.81
NME3-209ENST00000566600 WASHC4Q2M389 1173 aa32.63■■■□□ 2.81
NME3-209ENST00000566600 CHRNDQ07001 517 aa32.62■■■□□ 2.81
NME3-209ENST00000566600 MTX1Q13505 466 aa32.62■■■□□ 2.81
NME3-209ENST00000566600 LEMD3Q9Y2U8 911 aa32.62■■■□□ 2.81
NME3-209ENST00000566600 NIM1KQ8IY84 436 aa32.61■■■□□ 2.81
NME3-209ENST00000566600 COG6Q9Y2V7 657 aa32.61■■■□□ 2.81
NME3-209ENST00000566600 DPY19L2Q6NUT2 758 aa32.6■■■□□ 2.81
NME3-209ENST00000566600 ZC3H12CQ9C0D7 883 aaKnown RBP32.6■■■□□ 2.81
NME3-209ENST00000566600 RFX5P48382 616 aaPredicted RBP32.59■■■□□ 2.81
NME3-209ENST00000566600 RRP1P56182 461 aaKnown RBP32.59■■■□□ 2.81
NME3-209ENST00000566600 MROH5Q6ZUA9 1318 aa32.58■■■□□ 2.81
NME3-209ENST00000566600 KDM2BQ8NHM5 1336 aa32.58■■■□□ 2.81
NME3-209ENST00000566600 ZNF784Q8NCA9 323 aaPredicted RBP32.58■■■□□ 2.81
NME3-209ENST00000566600 FBXO3Q9UK99 471 aa32.58■■■□□ 2.81
NME3-209ENST00000566600 FZD9O00144 591 aa32.57■■■□□ 2.8
NME3-209ENST00000566600 SRGAP3O43295 1099 aa32.57■■■□□ 2.8
NME3-209ENST00000566600 KCNJ4P48050 445 aa32.57■■■□□ 2.8
NME3-209ENST00000566600 PTPN12Q05209 780 aaKnown RBP32.57■■■□□ 2.8
NME3-209ENST00000566600 RIPOR2Q9Y4F9 1068 aa32.57■■■□□ 2.8
NME3-209ENST00000566600 GLTPD2A6NH11 291 aa32.56■■■□□ 2.8
NME3-209ENST00000566600 RIMBP2O15034 1052 aa32.56■■■□□ 2.8
NME3-209ENST00000566600 C20orf194Q5TEA3 1177 aa32.56■■■□□ 2.8
NME3-209ENST00000566600 PUS3Q9BZE2 481 aaKnown RBP32.56■■■□□ 2.8
NME3-209ENST00000566600 ZNF804BA4D1E1 1349 aa32.55■■■□□ 2.8
NME3-209ENST00000566600 EIF6P56537 245 aaKnown RBP32.55■■■□□ 2.8
NME3-209ENST00000566600 KLHDC4Q8TBB5 520 aa32.55■■■□□ 2.8
NME3-209ENST00000566600 ZNRF3Q9ULT6 936 aa32.55■■■□□ 2.8
NME3-209ENST00000566600 COL4A5P29400 1685 aa32.54■■■□□ 2.8
NME3-209ENST00000566600 EYA2O00167 538 aa32.54■■■□□ 2.8
NME3-209ENST00000566600 GPBP1L1Q9HC44 474 aaPredicted RBP32.54■■■□□ 2.8
NME3-209ENST00000566600 COPRSQ9NQ92 184 aa32.54■■■□□ 2.8
NME3-209ENST00000566600 MED23Q9ULK4 1368 aa32.54■■■□□ 2.8
NME3-209ENST00000566600 G3V3G9 751 aa32.53■■■□□ 2.8
NME3-209ENST00000566600 LRRC24Q50LG9 513 aa32.53■■■□□ 2.8
NME3-209ENST00000566600 DCAF8Q5TAQ9 597 aa32.53■■■□□ 2.8
NME3-209ENST00000566600 HELBQ8NG08 1087 aaPredicted RBP32.53■■■□□ 2.8
NME3-209ENST00000566600 GPR101Q96P66 508 aaPredicted RBP32.53■■■□□ 2.8
NME3-209ENST00000566600 TAF5LO75529 589 aa32.52■■■□□ 2.8
NME3-209ENST00000566600 CIAO1O76071 339 aa32.52■■■□□ 2.8
NME3-209ENST00000566600 ZNF526Q8TF50 670 aaPredicted RBP32.52■■■□□ 2.8
NME3-209ENST00000566600 C1orf115Q9H7X2 142 aa32.52■■■□□ 2.8
NME3-209ENST00000566600 A0A1B0GUL6 1792 aa32.51■■■□□ 2.79
NME3-209ENST00000566600 ATP8B2P98198 1209 aa32.51■■■□□ 2.79
NME3-209ENST00000566600 METTL24Q5JXM2 366 aa32.51■■■□□ 2.79
NME3-209ENST00000566600 ZBTB40Q9NUA8 1239 aa32.5■■■□□ 2.79
NME3-209ENST00000566600 UBE4AQ14139 1066 aa32.49■■■□□ 2.79
NME3-209ENST00000566600 SIL1Q9H173 461 aa32.49■■■□□ 2.79
NME3-209ENST00000566600 ZNF541Q9H0D2 1346 aa32.49■■■□□ 2.79
NME3-209ENST00000566600 WTIPA6NIX2 430 aaPredicted RBP32.48■■■□□ 2.79
NME3-209ENST00000566600 C15orf52Q6ZUT6 534 aaKnown RBP32.48■■■□□ 2.79
NME3-209ENST00000566600 GPC2Q8N158 579 aa32.48■■■□□ 2.79
NME3-209ENST00000566600 DBNDD1Q9H9R9 158 aa32.48■■■□□ 2.79
NME3-209ENST00000566600 PNMA6EA0A0J9YXQ4 647 aa32.47■■■□□ 2.79
NME3-209ENST00000566600 ECE2O60344 883 aa32.47■■■□□ 2.79
NME3-209ENST00000566600 PDE8BO95263 885 aa32.47■■■□□ 2.79
NME3-209ENST00000566600 IL15P40933 162 aaPredicted RBP32.47■■■□□ 2.79
NME3-209ENST00000566600 DOK7Q18PE1 504 aa32.47■■■□□ 2.79
NME3-209ENST00000566600 ATG9AQ7Z3C6 839 aa32.47■■■□□ 2.79
NME3-209ENST00000566600 SSH3Q8TE77 659 aa32.47■■■□□ 2.79
NME3-209ENST00000566600 PA2G4Q9UQ80 394 aaKnown RBP32.47■■■□□ 2.79
NME3-209ENST00000566600 DDNO94850 711 aaPredicted RBP32.46■■■□□ 2.79
NME3-209ENST00000566600 TNIP1Q15025 636 aa32.46■■■□□ 2.79
NME3-209ENST00000566600 POLA2Q14181 598 aa32.45■■■□□ 2.79
NME3-209ENST00000566600 CEP85Q6P2H3 762 aa32.45■■■□□ 2.79
NME3-209ENST00000566600 PODNQ7Z5L7 613 aa32.45■■■□□ 2.79
NME3-209ENST00000566600 CXCL9Q07325 125 aa32.44■■■□□ 2.78
NME3-209ENST00000566600 CIAPIN1Q6FI81 312 aa32.44■■■□□ 2.78
NME3-209ENST00000566600 RPAP2Q8IXW5 612 aaPredicted RBP32.44■■■□□ 2.78
NME3-209ENST00000566600 VGLL2Q8N8G2 317 aa32.44■■■□□ 2.78
NME3-209ENST00000566600 COA1Q9GZY4 146 aa32.44■■■□□ 2.78
NME3-209ENST00000566600 CEP126Q9P2H0 1117 aa32.44■■■□□ 2.78
NME3-209ENST00000566600 YDJCA8MPS7 323 aa32.43■■■□□ 2.78
NME3-209ENST00000566600 SNAP23O00161 211 aa32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms