RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 KCNQ5Q9NR82 932 aa21.46■■□□□ 1.03
CMTM3-205ENST00000562707 ANKIB1Q9P2G1 1089 aa21.46■■□□□ 1.03
CMTM3-205ENST00000562707 LAMB2P55268 1798 aa21.46■■□□□ 1.03
CMTM3-205ENST00000562707 ELL2O00472 640 aaPredicted RBP21.45■■□□□ 1.02
CMTM3-205ENST00000562707 ZNF853P0CG23 659 aa21.45■■□□□ 1.02
CMTM3-205ENST00000562707 GNAI1P63096 354 aa21.45■■□□□ 1.02
CMTM3-205ENST00000562707 DLK2Q6UY11 383 aa21.45■■□□□ 1.02
CMTM3-205ENST00000562707 MYD88Q99836 296 aa21.45■■□□□ 1.02
CMTM3-205ENST00000562707 PHAXQ9H814 394 aaKnown RBP21.45■■□□□ 1.02
CMTM3-205ENST00000562707 SEC31BQ9NQW1 1179 aa21.45■■□□□ 1.02
CMTM3-205ENST00000562707 IFT57Q9NWB7 429 aa21.45■■□□□ 1.02
CMTM3-205ENST00000562707 PODXL2Q9NZ53 605 aa21.45■■□□□ 1.02
CMTM3-205ENST00000562707 TRPM7Q96QT4 1865 aa21.45■■□□□ 1.02
CMTM3-205ENST00000562707 CCDC152Q4G0S7 254 aa21.44■■□□□ 1.02
CMTM3-205ENST00000562707 CCDC191Q8NCU4 936 aa21.44■■□□□ 1.02
CMTM3-205ENST00000562707 CHMP4AQ9BY43 222 aa21.44■■□□□ 1.02
CMTM3-205ENST00000562707 GBA2Q9HCG7 927 aaPredicted RBP21.44■■□□□ 1.02
CMTM3-205ENST00000562707 GGA1Q9UJY5 639 aa21.44■■□□□ 1.02
CMTM3-205ENST00000562707 UFL1O94874 794 aa21.43■■□□□ 1.02
CMTM3-205ENST00000562707 EGFRP00533 1210 aa21.43■■□□□ 1.02
CMTM3-205ENST00000562707 VIL1P09327 827 aaKnown RBP21.43■■□□□ 1.02
CMTM3-205ENST00000562707 KIF4BQ2VIQ3 1234 aa21.43■■□□□ 1.02
CMTM3-205ENST00000562707 RGMBQ6NW40 437 aa21.43■■□□□ 1.02
CMTM3-205ENST00000562707 RTL9Q8NET4 1388 aa21.43■■□□□ 1.02
CMTM3-205ENST00000562707 ADM5C9JUS6 153 aa21.42■■□□□ 1.02
CMTM3-205ENST00000562707 APAF1O14727 1248 aa21.42■■□□□ 1.02
CMTM3-205ENST00000562707 PDE8AO60658 829 aa21.42■■□□□ 1.02
CMTM3-205ENST00000562707 DDX58O95786 925 aaKnown RBP21.42■■□□□ 1.02
CMTM3-205ENST00000562707 PCCAP05165 728 aaPredicted RBP21.42■■□□□ 1.02
CMTM3-205ENST00000562707 FAM161AQ3B820 660 aa21.42■■□□□ 1.02
CMTM3-205ENST00000562707 SULF1Q8IWU6 871 aa21.42■■□□□ 1.02
CMTM3-205ENST00000562707 CCDC102AQ96A19 550 aa21.42■■□□□ 1.02
CMTM3-205ENST00000562707 CWC25Q9NXE8 425 aaPredicted RBP21.42■■□□□ 1.02
CMTM3-205ENST00000562707 ZIC5Q96T25 663 aa21.41■■□□□ 1.02
CMTM3-205ENST00000562707 LRRC37AA6NMS7 1700 aa21.41■■□□□ 1.02
CMTM3-205ENST00000562707 ZNF157P51786 506 aaPredicted RBP21.4■■□□□ 1.02
CMTM3-205ENST00000562707 MLLT1Q03111 559 aaPredicted RBP21.4■■□□□ 1.02
CMTM3-205ENST00000562707 MCOLN1Q9GZU1 580 aa21.4■■□□□ 1.02
CMTM3-205ENST00000562707 DDX60Q8IY21 1712 aaKnown RBP21.39■■□□□ 1.01
CMTM3-205ENST00000562707 DGKZQ13574 1117 aa21.39■■□□□ 1.01
CMTM3-205ENST00000562707 CCDC30Q5VVM6 783 aa21.39■■□□□ 1.01
CMTM3-205ENST00000562707 ANKRD18AQ8IVF6 992 aa21.39■■□□□ 1.01
CMTM3-205ENST00000562707 JARID2Q92833 1246 aaPredicted RBP21.39■■□□□ 1.01
CMTM3-205ENST00000562707 CCDC85AQ96PX6 553 aaPredicted RBP21.39■■□□□ 1.01
CMTM3-205ENST00000562707 METTL22Q9BUU2 404 aaPredicted RBP21.39■■□□□ 1.01
CMTM3-205ENST00000562707 PRKRIP1Q9H875 184 aaPredicted RBP21.39■■□□□ 1.01
CMTM3-205ENST00000562707 GGA3Q9NZ52 723 aa21.39■■□□□ 1.01
CMTM3-205ENST00000562707 FAM155AB1AL88 458 aaPredicted RBP21.38■■□□□ 1.01
CMTM3-205ENST00000562707 KIF23Q02241 960 aaPredicted RBP21.38■■□□□ 1.01
CMTM3-205ENST00000562707 RSBN1LQ6PCB5 846 aaPredicted RBP21.38■■□□□ 1.01
CMTM3-205ENST00000562707 C8orf58Q8NAV2 365 aa21.38■■□□□ 1.01
CMTM3-205ENST00000562707 AGBL3Q8NEM8 1001 aa21.38■■□□□ 1.01
CMTM3-205ENST00000562707 TAF1P21675 1872 aa21.38■■□□□ 1.01
CMTM3-205ENST00000562707 XDHP47989 1333 aa21.37■■□□□ 1.01
CMTM3-205ENST00000562707 ATP2B4P23634 1241 aa21.37■■□□□ 1.01
CMTM3-205ENST00000562707 RGS19P49795 217 aa21.37■■□□□ 1.01
CMTM3-205ENST00000562707 ZNF280AP59817 542 aaPredicted RBP21.36■■□□□ 1.01
CMTM3-205ENST00000562707 SCARF1Q14162 830 aa21.36■■□□□ 1.01
CMTM3-205ENST00000562707 CDC5LQ99459 802 aaKnown RBP21.36■■□□□ 1.01
CMTM3-205ENST00000562707 MAP3K2Q9Y2U5 619 aa21.36■■□□□ 1.01
CMTM3-205ENST00000562707 COL4A1P02462 1669 aa21.35■■□□□ 1.01
CMTM3-205ENST00000562707 PODNQ7Z5L7 613 aa21.35■■□□□ 1.01
CMTM3-205ENST00000562707 CDCA5Q96FF9 252 aa21.35■■□□□ 1.01
CMTM3-205ENST00000562707 SAGE1Q9NXZ1 904 aa21.35■■□□□ 1.01
CMTM3-205ENST00000562707 ASTN2O75129 1339 aaPredicted RBP21.34■■□□□ 1.01
CMTM3-205ENST00000562707 USP17L3A6NCW0 530 aa21.34■■□□□ 1.01
CMTM3-205ENST00000562707 USP17L4A6NCW7 530 aa21.34■■□□□ 1.01
CMTM3-205ENST00000562707 USP17L8P0C7I0 530 aa21.34■■□□□ 1.01
CMTM3-205ENST00000562707 ANGEL2Q5VTE6 544 aaKnown RBP21.34■■□□□ 1.01
CMTM3-205ENST00000562707 USP17L1Q7RTZ2 530 aa21.34■■□□□ 1.01
CMTM3-205ENST00000562707 NEXNQ0ZGT2 675 aa21.33■■□□□ 1.01
CMTM3-205ENST00000562707 KSR2Q6VAB6 950 aa21.33■■□□□ 1.01
CMTM3-205ENST00000562707 MYOZ2Q9NPC6 264 aa21.33■■□□□ 1.01
CMTM3-205ENST00000562707 TRPA1O75762 1119 aa21.32■■□□□ 1
CMTM3-205ENST00000562707 SLC10A3P09131 477 aa21.32■■□□□ 1
CMTM3-205ENST00000562707 CTSWP56202 376 aa21.32■■□□□ 1
CMTM3-205ENST00000562707 GMLQ99445 158 aa21.32■■□□□ 1
CMTM3-205ENST00000562707 STK31Q9BXU1 1019 aa21.32■■□□□ 1
CMTM3-205ENST00000562707 RNF186Q9NXI6 227 aa21.32■■□□□ 1
CMTM3-205ENST00000562707 PI4KAP2A4QPH2 592 aa21.31■■□□□ 1
CMTM3-205ENST00000562707 FKBP1BP68106 108 aa21.31■■□□□ 1
CMTM3-205ENST00000562707 REM2Q8IYK8 340 aaPredicted RBP21.31■■□□□ 1
CMTM3-205ENST00000562707 PI4KAP1Q8N8J0 262 aa21.31■■□□□ 1
CMTM3-205ENST00000562707 BSDC1Q9NW68 430 aaPredicted RBP21.31■■□□□ 1
CMTM3-205ENST00000562707 ZNF609O15014 1411 aa21.3■■□□□ 1
CMTM3-205ENST00000562707 TSPYL6Q8N831 410 aa21.3■■□□□ 1
CMTM3-205ENST00000562707 TTLL11Q8NHH1 800 aa21.3■■□□□ 1
CMTM3-205ENST00000562707 CSRNP1Q96S65 589 aa21.3■■□□□ 1
CMTM3-205ENST00000562707 MINPP1Q9UNW1 487 aa21.3■■□□□ 1
CMTM3-205ENST00000562707 PITPNM2Q9BZ72 1349 aa21.29■■□□□ 1
CMTM3-205ENST00000562707 IGKV5-2P06315 115 aa21.29■■□□□ 1
CMTM3-205ENST00000562707 OGFOD1Q8N543 542 aa21.28■■□□□ 1
CMTM3-205ENST00000562707 GREM2Q9H772 168 aa21.28■■□□□ 1
CMTM3-205ENST00000562707 MED23Q9ULK4 1368 aa21.27■■□□□ 1
CMTM3-205ENST00000562707 CCT4P50991 539 aaKnown RBP21.27■■□□□ 1
CMTM3-205ENST00000562707 FBXW7Q969H0 707 aa21.27■■□□□ 1
CMTM3-205ENST00000562707 WTIPA6NIX2 430 aaPredicted RBP21.26■□□□□ 0.99
CMTM3-205ENST00000562707 IGHMBP2P38935 993 aaKnown RBP21.26■□□□□ 0.99
CMTM3-205ENST00000562707 CWF19L2Q2TBE0 894 aaKnown RBP21.26■□□□□ 0.99
CMTM3-205ENST00000562707 RASAL3Q86YV0 1011 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms