RNA–Protein interactions for RNA: ENST00000561610.1

PPP4C-202, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4C, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-202ENST00000561610 MPNDQ8N594 471 aa23.37■■□□□ 1.33
PPP4C-202ENST00000561610 NSFL1CQ9UNZ2 370 aaKnown RBP23.37■■□□□ 1.33
PPP4C-202ENST00000561610 LRRFIP2Q9Y608 721 aaKnown RBP23.37■■□□□ 1.33
PPP4C-202ENST00000561610 FER1L6Q2WGJ9 1857 aa23.37■■□□□ 1.33
PPP4C-202ENST00000561610 COL4A1P02462 1669 aa23.37■■□□□ 1.33
PPP4C-202ENST00000561610 LMNB1P20700 586 aa23.36■■□□□ 1.33
PPP4C-202ENST00000561610 ZNF277Q9NRM2 450 aaPredicted RBP23.36■■□□□ 1.33
PPP4C-202ENST00000561610 ANKIB1Q9P2G1 1089 aa23.36■■□□□ 1.33
PPP4C-202ENST00000561610 CCDC88AQ3V6T2 1871 aa23.36■■□□□ 1.33
PPP4C-202ENST00000561610 GRIPAP1Q4V328 841 aa23.35■■□□□ 1.33
PPP4C-202ENST00000561610 KAZALD1Q96I82 304 aa23.35■■□□□ 1.33
PPP4C-202ENST00000561610 RTL9Q8NET4 1388 aa23.35■■□□□ 1.33
PPP4C-202ENST00000561610 PCNTO95613 3336 aa23.35■■□□□ 1.33
PPP4C-202ENST00000561610 ZNF594Q96JF6 807 aaPredicted RBP23.34■■□□□ 1.33
PPP4C-202ENST00000561610 C6orf229H3BNL8 230 aa23.33■■□□□ 1.33
PPP4C-202ENST00000561610 GPSM2P81274 684 aa23.33■■□□□ 1.33
PPP4C-202ENST00000561610 ANKRD44Q8N8A2 993 aa23.33■■□□□ 1.33
PPP4C-202ENST00000561610 SUPT20HQ8NEM7 779 aa23.33■■□□□ 1.33
PPP4C-202ENST00000561610 COG6Q9Y2V7 657 aa23.33■■□□□ 1.33
PPP4C-202ENST00000561610 GNAI2P04899 355 aa23.33■■□□□ 1.32
PPP4C-202ENST00000561610 CNNM1Q9NRU3 951 aa23.33■■□□□ 1.32
PPP4C-202ENST00000561610 SBF1O95248 1867 aa23.32■■□□□ 1.32
PPP4C-202ENST00000561610 IARSP41252 1262 aaKnown RBP23.32■■□□□ 1.32
PPP4C-202ENST00000561610 PSMD1Q99460 953 aa23.32■■□□□ 1.32
PPP4C-202ENST00000561610 BSDC1Q9NW68 430 aaPredicted RBP23.32■■□□□ 1.32
PPP4C-202ENST00000561610 LTBP3Q9NS15 1303 aa23.32■■□□□ 1.32
PPP4C-202ENST00000561610 PPIP5K2O43314 1243 aa23.31■■□□□ 1.32
PPP4C-202ENST00000561610 RABL6Q3YEC7 729 aaPredicted RBP23.31■■□□□ 1.32
PPP4C-202ENST00000561610 LDHAL6AQ6ZMR3 332 aa23.31■■□□□ 1.32
PPP4C-202ENST00000561610 C1orf115Q9H7X2 142 aa23.31■■□□□ 1.32
PPP4C-202ENST00000561610 LARGE2Q8N3Y3 721 aa23.3■■□□□ 1.32
PPP4C-202ENST00000561610 RIMBP2O15034 1052 aa23.29■■□□□ 1.32
PPP4C-202ENST00000561610 UFL1O94874 794 aa23.29■■□□□ 1.32
PPP4C-202ENST00000561610 KCNJ4P48050 445 aa23.29■■□□□ 1.32
PPP4C-202ENST00000561610 RRP1P56182 461 aaKnown RBP23.29■■□□□ 1.32
PPP4C-202ENST00000561610 MVPQ14764 893 aaKnown RBP23.29■■□□□ 1.32
PPP4C-202ENST00000561610 JDP2Q8WYK2 163 aa23.29■■□□□ 1.32
PPP4C-202ENST00000561610 GGA1Q9UJY5 639 aa23.29■■□□□ 1.32
PPP4C-202ENST00000561610 MINPP1Q9UNW1 487 aa23.29■■□□□ 1.32
PPP4C-202ENST00000561610 LRRC37AA6NMS7 1700 aa23.29■■□□□ 1.32
PPP4C-202ENST00000561610 XDHP47989 1333 aa23.28■■□□□ 1.32
PPP4C-202ENST00000561610 G3V3G9 751 aa23.28■■□□□ 1.32
PPP4C-202ENST00000561610 AOC3Q16853 763 aa23.28■■□□□ 1.32
PPP4C-202ENST00000561610 DCAF8Q5TAQ9 597 aa23.28■■□□□ 1.32
PPP4C-202ENST00000561610 C20orf194Q5TEA3 1177 aa23.28■■□□□ 1.32
PPP4C-202ENST00000561610 KLHDC4Q8TBB5 520 aa23.28■■□□□ 1.32
PPP4C-202ENST00000561610 GPR101Q96P66 508 aaPredicted RBP23.28■■□□□ 1.32
PPP4C-202ENST00000561610 EYA3Q99504 573 aa23.28■■□□□ 1.32
PPP4C-202ENST00000561610 ANKRD2Q9GZV1 360 aa23.27■■□□□ 1.32
PPP4C-202ENST00000561610 DDX19BQ9UMR2 479 aa23.27■■□□□ 1.32
PPP4C-202ENST00000561610 ZBTB7BO15156 539 aaPredicted RBP23.26■■□□□ 1.31
PPP4C-202ENST00000561610 ATP2B4P23634 1241 aa23.26■■□□□ 1.31
PPP4C-202ENST00000561610 CHRNDQ07001 517 aa23.26■■□□□ 1.31
PPP4C-202ENST00000561610 PDE3AQ14432 1141 aa23.26■■□□□ 1.31
PPP4C-202ENST00000561610 WASHC4Q2M389 1173 aa23.26■■□□□ 1.31
PPP4C-202ENST00000561610 NIM1KQ8IY84 436 aa23.26■■□□□ 1.31
PPP4C-202ENST00000561610 HELBQ8NG08 1087 aaPredicted RBP23.26■■□□□ 1.31
PPP4C-202ENST00000561610 TBC1D16Q8TBP0 767 aa23.26■■□□□ 1.31
PPP4C-202ENST00000561610 POLLQ9UGP5 575 aa23.26■■□□□ 1.31
PPP4C-202ENST00000561610 TIAM2Q8IVF5 1701 aa23.26■■□□□ 1.31
PPP4C-202ENST00000561610 SRGAP3O43295 1099 aa23.25■■□□□ 1.31
PPP4C-202ENST00000561610 PUS3Q9BZE2 481 aaKnown RBP23.25■■□□□ 1.31
PPP4C-202ENST00000561610 SIL1Q9H173 461 aa23.25■■□□□ 1.31
PPP4C-202ENST00000561610 SNED1Q8TER0 1413 aa23.25■■□□□ 1.31
PPP4C-202ENST00000561610 TAF5LO75529 589 aa23.24■■□□□ 1.31
PPP4C-202ENST00000561610 RTFDC1Q9BY42 306 aaPredicted RBP23.24■■□□□ 1.31
PPP4C-202ENST00000561610 ZC3H12CQ9C0D7 883 aaKnown RBP23.24■■□□□ 1.31
PPP4C-202ENST00000561610 CHMP4BQ9H444 224 aaKnown RBP23.24■■□□□ 1.31
PPP4C-202ENST00000561610 PODXL2Q9NZ53 605 aa23.24■■□□□ 1.31
PPP4C-202ENST00000561610 DICER1Q9UPY3 1922 aaKnown RBP23.23■■□□□ 1.31
PPP4C-202ENST00000561610 LRRC24Q50LG9 513 aa23.22■■□□□ 1.31
PPP4C-202ENST00000561610 METTL24Q5JXM2 366 aa23.22■■□□□ 1.31
PPP4C-202ENST00000561610 EIF6P56537 245 aaKnown RBP23.21■■□□□ 1.31
PPP4C-202ENST00000561610 KIAA2012Q0VF49 1180 aa23.21■■□□□ 1.31
PPP4C-202ENST00000561610 DOK7Q18PE1 504 aa23.21■■□□□ 1.31
PPP4C-202ENST00000561610 DPY19L2Q6NUT2 758 aa23.21■■□□□ 1.31
PPP4C-202ENST00000561610 VPS33BQ9H267 617 aa23.21■■□□□ 1.31
PPP4C-202ENST00000561610 PA2G4Q9UQ80 394 aaKnown RBP23.21■■□□□ 1.31
PPP4C-202ENST00000561610 DUOX1Q9NRD9 1551 aa23.21■■□□□ 1.31
PPP4C-202ENST00000561610 DBNDD1Q9H9R9 158 aa23.2■■□□□ 1.3
PPP4C-202ENST00000561610 LEMD3Q9Y2U8 911 aa23.2■■□□□ 1.3
PPP4C-202ENST00000561610 ZNF804BA4D1E1 1349 aa23.2■■□□□ 1.3
PPP4C-202ENST00000561610 RFX5P48382 616 aaPredicted RBP23.19■■□□□ 1.3
PPP4C-202ENST00000561610 PTPN12Q05209 780 aaKnown RBP23.19■■□□□ 1.3
PPP4C-202ENST00000561610 SUPT16HQ9Y5B9 1047 aaKnown RBP23.19■■□□□ 1.3
PPP4C-202ENST00000561610 MROH5Q6ZUA9 1318 aa23.19■■□□□ 1.3
PPP4C-202ENST00000561610 ZC3H4Q9UPT8 1303 aaKnown RBP23.19■■□□□ 1.3
PPP4C-202ENST00000561610 WTIPA6NIX2 430 aaPredicted RBP23.18■■□□□ 1.3
PPP4C-202ENST00000561610 EYA2O00167 538 aa23.18■■□□□ 1.3
PPP4C-202ENST00000561610 VEGFAP15692 232 aaPredicted RBP23.18■■□□□ 1.3
PPP4C-202ENST00000561610 MKRN1Q9UHC7 482 aaKnown RBP23.18■■□□□ 1.3
PPP4C-202ENST00000561610 GJA3Q9Y6H8 435 aa23.18■■□□□ 1.3
PPP4C-202ENST00000561610 LTBP1Q14766 1721 aa23.17■■□□□ 1.3
PPP4C-202ENST00000561610 PNMA6EA0A0J9YXQ4 647 aa23.17■■□□□ 1.3
PPP4C-202ENST00000561610 SNAP23O00161 211 aa23.17■■□□□ 1.3
PPP4C-202ENST00000561610 ATP8B2P98198 1209 aa23.17■■□□□ 1.3
PPP4C-202ENST00000561610 RIPOR2Q9Y4F9 1068 aa23.17■■□□□ 1.3
PPP4C-202ENST00000561610 OS9Q13438 667 aaPredicted RBP23.16■■□□□ 1.3
PPP4C-202ENST00000561610 MTX1Q13505 466 aa23.16■■□□□ 1.3
PPP4C-202ENST00000561610 ZNRF3Q9ULT6 936 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms