RNA–Protein interactions for RNA: ENST00000558709.1

SCG3-203, Transcript of secretogranin III, humanhuman

TSL 2

Gene SCG3, Length 896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-203ENST00000558709 EMILIN1Q9Y6C2 1016 aa11.17□□□□□ -0.62
SCG3-203ENST00000558709 SLC16A10Q8TF71 515 aa11.16□□□□□ -0.62
SCG3-203ENST00000558709 TRIM47Q96LD4 638 aa11.16□□□□□ -0.62
SCG3-203ENST00000558709 CABP1Q9NZU7 370 aa11.16□□□□□ -0.62
SCG3-203ENST00000558709 CENPJQ9HC77 1338 aaPredicted RBP11.15□□□□□ -0.62
SCG3-203ENST00000558709 MEIOBQ8N635 442 aa11.15□□□□□ -0.62
SCG3-203ENST00000558709 WDR90Q96KV7 1748 aa11.15□□□□□ -0.63
SCG3-203ENST00000558709 ADCY9O60503 1353 aa11.15□□□□□ -0.63
SCG3-203ENST00000558709 UBR3Q6ZT12 1888 aa11.15□□□□□ -0.63
SCG3-203ENST00000558709 ITGB4P16144 1822 aa11.14□□□□□ -0.63
SCG3-203ENST00000558709 HSPA6P17066 643 aa11.14□□□□□ -0.63
SCG3-203ENST00000558709 NBPF1Q3BBV0 1214 aa11.14□□□□□ -0.63
SCG3-203ENST00000558709 MRPL14Q6P1L8 145 aaKnown RBP11.14□□□□□ -0.63
SCG3-203ENST00000558709 KCNH5Q8NCM2 988 aa11.14□□□□□ -0.63
SCG3-203ENST00000558709 GDPD2Q9HCC8 539 aa11.14□□□□□ -0.63
SCG3-203ENST00000558709 GRIN3BO60391 1043 aa11.13□□□□□ -0.63
SCG3-203ENST00000558709 SENP2Q9HC62 589 aa11.13□□□□□ -0.63
SCG3-203ENST00000558709 PCDHB9Q9Y5E1 797 aa11.13□□□□□ -0.63
SCG3-203ENST00000558709 TOGARAM1Q9Y4F4 1720 aa11.12□□□□□ -0.63
SCG3-203ENST00000558709 TTC21BQ7Z4L5 1316 aa11.12□□□□□ -0.63
SCG3-203ENST00000558709 SNRPBP14678 240 aaKnown RBP11.12□□□□□ -0.63
SCG3-203ENST00000558709 KCNQ4P56696 695 aa11.12□□□□□ -0.63
SCG3-203ENST00000558709 MCCD1P59942 119 aaPredicted RBP11.12□□□□□ -0.63
SCG3-203ENST00000558709 DHX9Q08211 1270 aaKnown RBP11.12□□□□□ -0.63
SCG3-203ENST00000558709 Q6ZVU0 165 aa11.12□□□□□ -0.63
SCG3-203ENST00000558709 ZNF526Q8TF50 670 aaPredicted RBP11.12□□□□□ -0.63
SCG3-203ENST00000558709 PRM3Q9NNZ6 103 aa11.12□□□□□ -0.63
SCG3-203ENST00000558709 TFCP2L1Q9NZI6 479 aa11.12□□□□□ -0.63
SCG3-203ENST00000558709 COG6Q9Y2V7 657 aa11.12□□□□□ -0.63
SCG3-203ENST00000558709 IL2RBP14784 551 aa11.11□□□□□ -0.63
SCG3-203ENST00000558709 SLC27A3Q5K4L6 730 aa11.11□□□□□ -0.63
SCG3-203ENST00000558709 KIFC2Q96AC6 838 aa11.11□□□□□ -0.63
SCG3-203ENST00000558709 NLRP2Q9NX02 1062 aa11.11□□□□□ -0.63
SCG3-203ENST00000558709 N4BP2Q86UW6 1770 aaPredicted RBP11.11□□□□□ -0.63
SCG3-203ENST00000558709 TTC21AQ8NDW8 1320 aa11.1□□□□□ -0.63
SCG3-203ENST00000558709 KIF13BQ9NQT8 1826 aa11.1□□□□□ -0.63
SCG3-203ENST00000558709 ERVH48-1M5A8F1 160 aa11.1□□□□□ -0.63
SCG3-203ENST00000558709 ZFP42Q96MM3 310 aa11.1□□□□□ -0.63
SCG3-203ENST00000558709 PGPEP1Q9NXJ5 209 aa11.1□□□□□ -0.63
SCG3-203ENST00000558709 KIAA1551Q9HCM1 1747 aa11.09□□□□□ -0.63
SCG3-203ENST00000558709 BRCA1P38398 1863 aaKnown RBP11.09□□□□□ -0.63
SCG3-203ENST00000558709 NSD2O96028 1365 aa11.09□□□□□ -0.63
SCG3-203ENST00000558709 FLIIQ13045 1269 aa11.09□□□□□ -0.63
SCG3-203ENST00000558709 TMPRSS4Q9NRS4 437 aa11.09□□□□□ -0.63
SCG3-203ENST00000558709 CICQ96RK0 1608 aaPredicted RBP11.09□□□□□ -0.63
SCG3-203ENST00000558709 KTN1Q86UP2 1357 aaKnown RBP11.08□□□□□ -0.64
SCG3-203ENST00000558709 LILRA1O75019 489 aa11.08□□□□□ -0.64
SCG3-203ENST00000558709 CBLBQ13191 982 aa11.08□□□□□ -0.64
SCG3-203ENST00000558709 MSL1Q68DK7 614 aa11.08□□□□□ -0.64
SCG3-203ENST00000558709 LINC00528Q8N1L1 170 aa11.08□□□□□ -0.64
SCG3-203ENST00000558709 ZNF592Q92610 1267 aa11.08□□□□□ -0.64
SCG3-203ENST00000558709 ZNF330Q9Y3S2 320 aaPredicted RBP11.08□□□□□ -0.64
SCG3-203ENST00000558709 C4BP0C0L5 1744 aa11.08□□□□□ -0.64
SCG3-203ENST00000558709 PCNTO95613 3336 aa11.08□□□□□ -0.64
SCG3-203ENST00000558709 EVC2Q86UK5 1308 aa11.08□□□□□ -0.64
SCG3-203ENST00000558709 ABL2P42684 1182 aa11.07□□□□□ -0.64
SCG3-203ENST00000558709 ANKRD24Q8TF21 1146 aa11.07□□□□□ -0.64
SCG3-203ENST00000558709 POM121Q96HA1 1249 aa11.07□□□□□ -0.64
SCG3-203ENST00000558709 PURBQ96QR8 312 aaKnown RBP11.07□□□□□ -0.64
SCG3-203ENST00000558709 PKD1L3Q7Z443 1732 aa11.06□□□□□ -0.64
SCG3-203ENST00000558709 ANKRD36BQ8N2N9 1353 aa11.06□□□□□ -0.64
SCG3-203ENST00000558709 COL23A1Q86Y22 540 aaPredicted RBP11.06□□□□□ -0.64
SCG3-203ENST00000558709 ZNF775Q96BV0 537 aaPredicted RBP11.06□□□□□ -0.64
SCG3-203ENST00000558709 SYTL4Q96C24 671 aaPredicted RBP11.06□□□□□ -0.64
SCG3-203ENST00000558709 USP31Q70CQ4 1352 aa11.05□□□□□ -0.64
SCG3-203ENST00000558709 ARFGEF1Q9Y6D6 1849 aa11.05□□□□□ -0.64
SCG3-203ENST00000558709 VAC14Q08AM6 782 aa11.05□□□□□ -0.64
SCG3-203ENST00000558709 SCARF1Q14162 830 aa11.05□□□□□ -0.64
SCG3-203ENST00000558709 DDX54Q8TDD1 881 aaKnown RBP11.05□□□□□ -0.64
SCG3-203ENST00000558709 MAP2P11137 1827 aaKnown RBP11.05□□□□□ -0.64
SCG3-203ENST00000558709 ADD1P35611 737 aaKnown RBP11.04□□□□□ -0.64
SCG3-203ENST00000558709 RAB15P59190 212 aa11.04□□□□□ -0.64
SCG3-203ENST00000558709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.04□□□□□ -0.64
SCG3-203ENST00000558709 KDF1Q8NAX2 398 aaPredicted RBP11.04□□□□□ -0.64
SCG3-203ENST00000558709 TSEN34Q9BSV6 310 aaKnown RBP11.04□□□□□ -0.64
SCG3-203ENST00000558709 CEP126Q9P2H0 1117 aa11.04□□□□□ -0.64
SCG3-203ENST00000558709 CCNL1Q9UK58 526 aaPredicted RBP11.04□□□□□ -0.64
SCG3-203ENST00000558709 CD163L1Q9NR16 1453 aa11.04□□□□□ -0.64
SCG3-203ENST00000558709 SBF1O95248 1867 aa11.04□□□□□ -0.64
SCG3-203ENST00000558709 WASHC4Q2M389 1173 aa11.03□□□□□ -0.64
SCG3-203ENST00000558709 NME9Q86XW9 330 aa11.03□□□□□ -0.64
SCG3-203ENST00000558709 WWC3Q9ULE0 1092 aa11.03□□□□□ -0.64
SCG3-203ENST00000558709 CD2APQ9Y5K6 639 aa11.03□□□□□ -0.64
SCG3-203ENST00000558709 MEGF6O75095 1541 aa11.03□□□□□ -0.64
SCG3-203ENST00000558709 RNF20Q5VTR2 975 aa11.02□□□□□ -0.65
SCG3-203ENST00000558709 PHTF2Q8N3S3 785 aa11.02□□□□□ -0.65
SCG3-203ENST00000558709 IGSF1Q8N6C5 1336 aa11.02□□□□□ -0.65
SCG3-203ENST00000558709 SBNO2Q9Y2G9 1366 aa11.02□□□□□ -0.65
SCG3-203ENST00000558709 SPINT1O43278 529 aa11.01□□□□□ -0.65
SCG3-203ENST00000558709 ADH1AP07327 375 aa11.01□□□□□ -0.65
SCG3-203ENST00000558709 ERVK-9P63128 1117 aa11.01□□□□□ -0.65
SCG3-203ENST00000558709 EIF4G2P78344 907 aaKnown RBP eCLIP11.01□□□□□ -0.65
SCG3-203ENST00000558709 C6orf118Q5T5N4 469 aa11.01□□□□□ -0.65
SCG3-203ENST00000558709 CCDC88AQ3V6T2 1871 aa11.01□□□□□ -0.65
SCG3-203ENST00000558709 USP47Q96K76 1375 aa11.01□□□□□ -0.65
SCG3-203ENST00000558709 DNAJC5GQ8N7S2 189 aa11□□□□□ -0.65
SCG3-203ENST00000558709 TNRC6CQ9HCJ0 1690 aaKnown RBP11□□□□□ -0.65
SCG3-203ENST00000558709 BMP2P12643 396 aa10.99□□□□□ -0.65
SCG3-203ENST00000558709 LCE2AQ5TA79 106 aaPredicted RBP10.99□□□□□ -0.65
SCG3-203ENST00000558709 LTV1Q96GA3 475 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms