RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 CHMLP26374 656 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 NEDD9Q14511 834 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 LRRD1A4D1F6 860 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 GOLGA6BA6NDN3 693 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 FAM173BQ6P4H8 233 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 CEP131Q9UPN4 1083 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 CLIP1P30622 1438 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 TMTC1Q8IUR5 882 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 CETN3O15182 167 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 TNFAIP3P21580 790 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 HPDP32754 393 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-248ENST00000558190 SH2D4BQ5SQS7 431 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 CCNB3Q8WWL7 1395 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 E7EVH7 732 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 ZNF202O95125 648 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 CKAP4Q07065 602 aaKnown RBP4.19□□□□□ -1.74
ATXN3-248ENST00000558190 NUTM2GQ5VZR2 741 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 WWC2Q6AWC2 1192 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 APBB1IPQ7Z5R6 666 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-248ENST00000558190 ZNF444Q8N0Y2 327 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-248ENST00000558190 ARID5AQ03989 594 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 LARSQ9P2J5 1176 aaKnown RBP4.19□□□□□ -1.74
ATXN3-248ENST00000558190 RBM6P78332 1123 aaKnown RBP4.19□□□□□ -1.74
ATXN3-248ENST00000558190 TCEANC2Q96MN5 208 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 ATP1A2P50993 1020 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 GUCY2FP51841 1108 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 MAP7Q14244 749 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 E2F5Q15329 346 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 SAMD15Q9P1V8 674 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 PUS7Q96PZ0 661 aaKnown RBP4.19□□□□□ -1.74
ATXN3-248ENST00000558190 CTAGE1Q96RT6 745 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 LRRC2Q9BYS8 371 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 SNRKQ9NRH2 765 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 ECHDC1Q9NTX5 307 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 NAPGQ99747 312 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-248ENST00000558190 VPS16Q9H269 839 aa4.19□□□□□ -1.74
ATXN3-248ENST00000558190 WDHD1O75717 1129 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 PPFIA1Q13136 1202 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 KLC4Q9NSK0 619 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 HMGB1P09429 215 aaKnown RBP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 UBA7P41226 1012 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 CCDC7Q96M83 1385 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 TRIM27P14373 513 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 CPA1P15085 419 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 WHAMMP3Q1A5X7 153 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 OTUD7BQ6GQQ9 843 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 EPN1Q9Y6I3 576 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 GPT2Q8TD30 523 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 MLECQ14165 292 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 GBP7Q8N8V2 638 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 SELENOSQ9BQE4 189 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 CTDP1Q9Y5B0 961 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 DHX57Q6P158 1386 aaKnown RBP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 PPP1R12BO60237 982 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 PDE1AP54750 535 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 MRPS25P82663 173 aaKnown RBP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 RAB3GAP2Q9H2M9 1393 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 IFIT3O14879 490 aaKnown RBP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 TSHZ3Q63HK5 1081 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 STMN4Q9H169 189 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 FAN1Q9Y2M0 1017 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 CREB3O43889 395 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 NNTQ13423 1086 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 NCAPGQ9BPX3 1015 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 CIB2O75838 187 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 USP5P45974 858 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 NLRP5P59047 1200 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 RPS6KA1Q15418 735 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 MIER3Q7Z3K6 550 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 OR8K1Q8NGG5 319 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 ARID5BQ14865 1188 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 SPATS2LQ9NUQ6 558 aaKnown RBP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 IMPACTQ9P2X3 320 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 KCNH3Q9ULD8 1083 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 TMEM110-MUSTN1A8MSY1 372 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 PPFIA4O75335 1185 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 CCDC57Q2TAC2 916 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 DDX46Q7L014 1031 aaKnown RBP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 ARHGAP45Q92619 1136 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 PHAXQ9H814 394 aaKnown RBP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 GLRX3O76003 335 aaKnown RBP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 IFI16Q16666 785 aaKnown RBP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 CFAP70Q5T0N1 1121 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 SOGA3Q5TF21 947 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 TCP11Q8WWU5 503 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 STXBP3O00186 592 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 ZNF131P52739 623 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 EPC1Q9H2F5 836 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 SPTLC2O15270 562 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 WHAMMQ8TF30 809 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 SH3GL3Q99963 347 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 CLSTN2Q9H4D0 955 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 G3BP2Q9UN86 482 aaKnown RBP4.18□□□□□ -1.74
ATXN3-248ENST00000558190 CDKL5O76039 1030 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 KCTD16Q68DU8 428 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 SULT6B1Q6IMI4 303 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 CCDC110Q8TBZ0 833 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 ARHGAP42A6NI28 874 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms