RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 NFAT5O94916 1531 aa4.93□□□□□ -1.62
RDH11-204ENST00000553578 AGERQ15109 404 aa4.93□□□□□ -1.62
RDH11-204ENST00000553578 LYPD8Q6UX82 237 aa4.93□□□□□ -1.62
RDH11-204ENST00000553578 TRIM34Q9BYJ4 488 aa4.93□□□□□ -1.62
RDH11-204ENST00000553578 IGSF5Q9NSI5 407 aa4.93□□□□□ -1.62
RDH11-204ENST00000553578 COL18A1P39060 1754 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 GOLGA6L3A6NEY3 463 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 UNCXA6NJT0 531 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 RGL3Q3MIN7 710 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 TBX22Q9Y458 520 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 CICQ96RK0 1608 aaPredicted RBP4.92□□□□□ -1.62
RDH11-204ENST00000553578 METP08581 1390 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 CGNL1Q0VF96 1302 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 EVC2Q86UK5 1308 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 PALM3A6NDB9 673 aaPredicted RBP4.92□□□□□ -1.62
RDH11-204ENST00000553578 TNNT1P13805 278 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 ARID4AP29374 1257 aaPredicted RBP4.92□□□□□ -1.62
RDH11-204ENST00000553578 PPP2R1AP30153 589 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 KCNA1Q09470 495 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 ESF1Q9H501 851 aaKnown RBP4.92□□□□□ -1.62
RDH11-204ENST00000553578 KLHL42Q9P2K6 505 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 STRCQ7RTU9 1775 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 A0A1W2PP64 1363 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 SKIP12755 728 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 CBX1P83916 185 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 KCNH2Q12809 1159 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 SF3A1Q15459 793 aaKnown RBP4.92□□□□□ -1.62
RDH11-204ENST00000553578 ZNF697Q5TEC3 545 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 PPP2R2DQ66LE6 453 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 ZNF662Q6ZS27 426 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 ARMC2Q8NEN0 867 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 SMAD5Q99717 465 aaKnown RBP4.92□□□□□ -1.62
RDH11-204ENST00000553578 PANK3Q9H999 370 aa4.92□□□□□ -1.62
RDH11-204ENST00000553578 LOC102724159A0A0B4J2E5 919 aa4.91□□□□□ -1.62
RDH11-204ENST00000553578 HMGB1P1B2RPK0 211 aaPredicted RBP4.91□□□□□ -1.62
RDH11-204ENST00000553578 RASA1P20936 1047 aa4.91□□□□□ -1.62
RDH11-204ENST00000553578 PWP2Q15269 919 aaKnown RBP4.91□□□□□ -1.62
RDH11-204ENST00000553578 SLFNL1Q499Z3 407 aa4.91□□□□□ -1.62
RDH11-204ENST00000553578 EVA1BQ9NVM1 165 aa4.91□□□□□ -1.62
RDH11-204ENST00000553578 WWC3Q9ULE0 1092 aa4.91□□□□□ -1.62
RDH11-204ENST00000553578 PRMT3O60678 531 aa4.91□□□□□ -1.62
RDH11-204ENST00000553578 WDHD1O75717 1129 aaPredicted RBP4.91□□□□□ -1.62
RDH11-204ENST00000553578 TAGLNQ01995 201 aaKnown RBP4.91□□□□□ -1.62
RDH11-204ENST00000553578 FOXC1Q12948 553 aa4.91□□□□□ -1.62
RDH11-204ENST00000553578 TRIM32Q13049 653 aa4.91□□□□□ -1.62
RDH11-204ENST00000553578 FBXW10Q5XX13 1052 aa4.91□□□□□ -1.62
RDH11-204ENST00000553578 ABCA3Q99758 1704 aa4.91□□□□□ -1.62
RDH11-204ENST00000553578 CTDSPL2Q05D32 466 aa4.91□□□□□ -1.62
RDH11-204ENST00000553578 SPRYD7Q5W111 196 aa4.91□□□□□ -1.62
RDH11-204ENST00000553578 NUDCQ9Y266 331 aa4.91□□□□□ -1.62
RDH11-204ENST00000553578 NSD3Q9BZ95 1437 aa4.91□□□□□ -1.62
RDH11-204ENST00000553578 CACNA1FO60840 1977 aa4.91□□□□□ -1.62
RDH11-204ENST00000553578 TPD52L2O43399 206 aaKnown RBP4.9□□□□□ -1.62
RDH11-204ENST00000553578 SAFB2Q14151 953 aaKnown RBP eCLIP4.9□□□□□ -1.62
RDH11-204ENST00000553578 LIAT1Q6ZQX7 453 aa4.9□□□□□ -1.62
RDH11-204ENST00000553578 EGFL6Q8IUX8 553 aa4.9□□□□□ -1.62
RDH11-204ENST00000553578 CEP120Q8N960 986 aa4.9□□□□□ -1.62
RDH11-204ENST00000553578 NEUROD4Q9HD90 331 aa4.9□□□□□ -1.62
RDH11-204ENST00000553578 IL16Q14005 1332 aa4.9□□□□□ -1.62
RDH11-204ENST00000553578 KDM3BQ7LBC6 1761 aa4.9□□□□□ -1.62
RDH11-204ENST00000553578 U2SURPO15042 1029 aaKnown RBP4.9□□□□□ -1.62
RDH11-204ENST00000553578 USP17L8P0C7I0 530 aa4.9□□□□□ -1.62
RDH11-204ENST00000553578 ZNF16P17020 682 aaPredicted RBP4.9□□□□□ -1.62
RDH11-204ENST00000553578 HSP90AB3PQ58FF7 597 aa4.9□□□□□ -1.62
RDH11-204ENST00000553578 RNF187Q5TA31 235 aaPredicted RBP4.9□□□□□ -1.62
RDH11-204ENST00000553578 SLC4A10Q6U841 1118 aa4.9□□□□□ -1.62
RDH11-204ENST00000553578 POGKQ9P215 609 aa4.9□□□□□ -1.62
RDH11-204ENST00000553578 OVOS2A0A0G2JMS6 1433 aa4.9□□□□□ -1.63
RDH11-204ENST00000553578 ZSCAN20P17040 1043 aaPredicted RBP4.9□□□□□ -1.63
RDH11-204ENST00000553578 DPH6Q7L8W6 267 aa4.9□□□□□ -1.63
RDH11-204ENST00000553578 ZNF598Q86UK7 904 aaKnown RBP4.9□□□□□ -1.63
RDH11-204ENST00000553578 PLEKHF1Q96S99 279 aa4.9□□□□□ -1.63
RDH11-204ENST00000553578 CARD10Q9BWT7 1032 aa4.9□□□□□ -1.63
RDH11-204ENST00000553578 IRX2Q9BZI1 471 aaPredicted RBP4.9□□□□□ -1.63
RDH11-204ENST00000553578 PPP1R12CQ9BZL4 782 aa4.9□□□□□ -1.63
RDH11-204ENST00000553578 UNC93B1Q9H1C4 597 aa4.9□□□□□ -1.63
RDH11-204ENST00000553578 PKD1L3Q7Z443 1732 aa4.9□□□□□ -1.63
RDH11-204ENST00000553578 LTN1O94822 1766 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 S100BP04271 92 aaPredicted RBP4.89□□□□□ -1.63
RDH11-204ENST00000553578 MSNP26038 577 aaKnown RBP4.89□□□□□ -1.63
RDH11-204ENST00000553578 ZC3H6P61129 1189 aaKnown RBP4.89□□□□□ -1.63
RDH11-204ENST00000553578 LINC01559Q495D7 138 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 NBPF14Q5TI25 921 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.89□□□□□ -1.63
RDH11-204ENST00000553578 PRKAG2Q9UGJ0 569 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 COL22A1Q8NFW1 1626 aaPredicted RBP4.89□□□□□ -1.63
RDH11-204ENST00000553578 CT47B1P0C2W7 299 aaPredicted RBP4.89□□□□□ -1.63
RDH11-204ENST00000553578 PLA2G2CQ5R387 149 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 GIMAP6Q6P9H5 292 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 LARP1Q6PKG0 1096 aaKnown RBP4.89□□□□□ -1.63
RDH11-204ENST00000553578 UBXN4Q92575 508 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 SPATA32Q96LK8 384 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 MAP10Q9P2G4 905 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 TCEAL9Q9UHQ7 104 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 SH3BP1Q9Y3L3 701 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 USP6P35125 1406 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 TUBGCP6Q96RT7 1819 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 UQCRHLA0A096LP55 91 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 ZNF500O60304 480 aaPredicted RBP4.89□□□□□ -1.63
RDH11-204ENST00000553578 UQCRHP07919 91 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms