RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 H7C1D1 291 aa12.83□□□□□ -0.36
ACTN1-208ENST00000553370 CHL1O00533 1208 aa12.83□□□□□ -0.36
ACTN1-208ENST00000553370 CELF2O95319 508 aaKnown RBP12.83□□□□□ -0.36
ACTN1-208ENST00000553370 HSP90B1P14625 803 aaKnown RBP12.83□□□□□ -0.36
ACTN1-208ENST00000553370 CALD1Q05682 793 aaKnown RBP12.83□□□□□ -0.36
ACTN1-208ENST00000553370 CYP4F22Q6NT55 531 aa12.83□□□□□ -0.36
ACTN1-208ENST00000553370 RIC3Q7Z5B4 369 aa12.83□□□□□ -0.36
ACTN1-208ENST00000553370 FAM89AQ96GI7 184 aa12.83□□□□□ -0.36
ACTN1-208ENST00000553370 RTFDC1Q9BY42 306 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-208ENST00000553370 WBP1LQ9NX94 342 aa12.83□□□□□ -0.36
ACTN1-208ENST00000553370 NSFL1CQ9UNZ2 370 aaKnown RBP12.83□□□□□ -0.36
ACTN1-208ENST00000553370 DUOX1Q9NRD9 1551 aa12.82□□□□□ -0.36
ACTN1-208ENST00000553370 CACNA1FO60840 1977 aa12.82□□□□□ -0.36
ACTN1-208ENST00000553370 RIMBP2O15034 1052 aa12.82□□□□□ -0.36
ACTN1-208ENST00000553370 GTPBP6O43824 516 aaPredicted RBP12.82□□□□□ -0.36
ACTN1-208ENST00000553370 FMR1Q06787 632 aaKnown RBP eCLIP12.82□□□□□ -0.36
ACTN1-208ENST00000553370 WASHC4Q2M389 1173 aa12.82□□□□□ -0.36
ACTN1-208ENST00000553370 DUSP27Q5VZP5 1158 aa12.82□□□□□ -0.36
ACTN1-208ENST00000553370 EYA3Q99504 573 aa12.82□□□□□ -0.36
ACTN1-208ENST00000553370 TRIM35Q9UPQ4 493 aa12.82□□□□□ -0.36
ACTN1-208ENST00000553370 PSME4Q14997 1843 aa12.82□□□□□ -0.36
ACTN1-208ENST00000553370 SCN9AQ15858 1988 aa12.81□□□□□ -0.36
ACTN1-208ENST00000553370 IRS4O14654 1257 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-208ENST00000553370 GPR101Q96P66 508 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-208ENST00000553370 GLIS2Q9BZE0 524 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-208ENST00000553370 DBNDD1Q9H9R9 158 aa12.81□□□□□ -0.36
ACTN1-208ENST00000553370 ADAMTS8Q9UP79 889 aa12.81□□□□□ -0.36
ACTN1-208ENST00000553370 HSPA8P11142 646 aaKnown RBP12.8□□□□□ -0.36
ACTN1-208ENST00000553370 GNAI1P63096 354 aa12.8□□□□□ -0.36
ACTN1-208ENST00000553370 MICALL2Q8IY33 904 aa12.8□□□□□ -0.36
ACTN1-208ENST00000553370 MBIPQ9NS73 344 aa12.8□□□□□ -0.36
ACTN1-208ENST00000553370 ANKIB1Q9P2G1 1089 aa12.8□□□□□ -0.36
ACTN1-208ENST00000553370 CNOT7Q9UIV1 285 aaKnown RBP12.8□□□□□ -0.36
ACTN1-208ENST00000553370 TLL2Q9Y6L7 1015 aa12.8□□□□□ -0.36
ACTN1-208ENST00000553370 ELL2O00472 640 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-208ENST00000553370 DDX58O95786 925 aaKnown RBP12.79□□□□□ -0.36
ACTN1-208ENST00000553370 CHRM1P11229 460 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-208ENST00000553370 CDC37L1Q7L3B6 337 aa12.79□□□□□ -0.36
ACTN1-208ENST00000553370 TRPM4Q8TD43 1214 aa12.79□□□□□ -0.36
ACTN1-208ENST00000553370 CELF1Q92879 486 aaKnown RBP12.79□□□□□ -0.36
ACTN1-208ENST00000553370 MYD88Q99836 296 aa12.79□□□□□ -0.36
ACTN1-208ENST00000553370 CHMP4AQ9BY43 222 aa12.79□□□□□ -0.36
ACTN1-208ENST00000553370 PSMD14O00487 310 aa12.78□□□□□ -0.36
ACTN1-208ENST00000553370 ECE2O60344 883 aa12.78□□□□□ -0.36
ACTN1-208ENST00000553370 AOC2O75106 756 aa12.78□□□□□ -0.36
ACTN1-208ENST00000553370 UFL1O94874 794 aa12.78□□□□□ -0.36
ACTN1-208ENST00000553370 DOK7Q18PE1 504 aa12.78□□□□□ -0.36
ACTN1-208ENST00000553370 RBM26Q5T8P6 1007 aaKnown RBP12.78□□□□□ -0.36
ACTN1-208ENST00000553370 ZC3H15Q8WU90 426 aaKnown RBP12.78□□□□□ -0.36
ACTN1-208ENST00000553370 ISCA1Q9BUE6 129 aa12.78□□□□□ -0.36
ACTN1-208ENST00000553370 IFT57Q9NWB7 429 aa12.78□□□□□ -0.36
ACTN1-208ENST00000553370 YDJCA8MPS7 323 aa12.77□□□□□ -0.37
ACTN1-208ENST00000553370 APAF1O14727 1248 aa12.77□□□□□ -0.37
ACTN1-208ENST00000553370 MNX1P50219 401 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-208ENST00000553370 GPSM2P81274 684 aa12.77□□□□□ -0.37
ACTN1-208ENST00000553370 SF3B3Q15393 1217 aaKnown RBP12.77□□□□□ -0.37
ACTN1-208ENST00000553370 CCDC152Q4G0S7 254 aa12.77□□□□□ -0.37
ACTN1-208ENST00000553370 TBC1D10BQ4KMP7 808 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-208ENST00000553370 CST9Q5W186 159 aa12.77□□□□□ -0.37
ACTN1-208ENST00000553370 DCPSQ96C86 337 aaKnown RBP12.77□□□□□ -0.37
ACTN1-208ENST00000553370 ZC3H12CQ9C0D7 883 aaKnown RBP12.77□□□□□ -0.37
ACTN1-208ENST00000553370 TSKSQ9UJT2 592 aa12.77□□□□□ -0.37
ACTN1-208ENST00000553370 RPS12P25398 132 aaKnown RBP12.76□□□□□ -0.37
ACTN1-208ENST00000553370 MAP2K2P36507 400 aa12.76□□□□□ -0.37
ACTN1-208ENST00000553370 HUNKP57058 714 aa12.76□□□□□ -0.37
ACTN1-208ENST00000553370 RPS8P62241 208 aaKnown RBP12.76□□□□□ -0.37
ACTN1-208ENST00000553370 KRT26Q7Z3Y9 468 aa12.76□□□□□ -0.37
ACTN1-208ENST00000553370 SAPCD2Q86UD0 394 aa12.76□□□□□ -0.37
ACTN1-208ENST00000553370 USP48Q86UV5 1035 aa12.76□□□□□ -0.37
ACTN1-208ENST00000553370 ZBTB38Q8NAP3 1195 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-208ENST00000553370 CCDC85AQ96PX6 553 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-208ENST00000553370 CWC25Q9NXE8 425 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-208ENST00000553370 GGA1Q9UJY5 639 aa12.76□□□□□ -0.37
ACTN1-208ENST00000553370 SHTN1A0MZ66 631 aa12.75□□□□□ -0.37
ACTN1-208ENST00000553370 CA12O43570 354 aa12.75□□□□□ -0.37
ACTN1-208ENST00000553370 COL4A1P02462 1669 aa12.75□□□□□ -0.37
ACTN1-208ENST00000553370 NEXNQ0ZGT2 675 aa12.75□□□□□ -0.37
ACTN1-208ENST00000553370 CCDC30Q5VVM6 783 aa12.75□□□□□ -0.37
ACTN1-208ENST00000553370 SAMD7Q7Z3H4 446 aa12.75□□□□□ -0.37
ACTN1-208ENST00000553370 TBC1D16Q8TBP0 767 aa12.75□□□□□ -0.37
ACTN1-208ENST00000553370 DPF2Q92785 391 aa12.75□□□□□ -0.37
ACTN1-208ENST00000553370 ABHD8Q96I13 439 aa12.75□□□□□ -0.37
ACTN1-208ENST00000553370 STK31Q9BXU1 1019 aa12.75□□□□□ -0.37
ACTN1-208ENST00000553370 PRKRIP1Q9H875 184 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-208ENST00000553370 POLLQ9UGP5 575 aa12.75□□□□□ -0.37
ACTN1-208ENST00000553370 CCDC85CA6NKD9 419 aa12.74□□□□□ -0.37
ACTN1-208ENST00000553370 PITPNM1O00562 1244 aa12.74□□□□□ -0.37
ACTN1-208ENST00000553370 HIRAP54198 1017 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-208ENST00000553370 KIF4BQ2VIQ3 1234 aa12.74□□□□□ -0.37
ACTN1-208ENST00000553370 ANKRD18AQ8IVF6 992 aa12.74□□□□□ -0.37
ACTN1-208ENST00000553370 SULF1Q8IWU6 871 aa12.74□□□□□ -0.37
ACTN1-208ENST00000553370 RASEFQ8IZ41 740 aa12.74□□□□□ -0.37
ACTN1-208ENST00000553370 C2orf69Q8N8R5 385 aa12.74□□□□□ -0.37
ACTN1-208ENST00000553370 CCDC191Q8NCU4 936 aa12.74□□□□□ -0.37
ACTN1-208ENST00000553370 FBXW7Q969H0 707 aa12.74□□□□□ -0.37
ACTN1-208ENST00000553370 PHAXQ9H814 394 aaKnown RBP12.74□□□□□ -0.37
ACTN1-208ENST00000553370 RYDENQ9NUL5 291 aaKnown RBP12.74□□□□□ -0.37
ACTN1-208ENST00000553370 PDE4DIPQ5VU43 2346 aa12.74□□□□□ -0.37
ACTN1-208ENST00000553370 PDE8AO60658 829 aa12.73□□□□□ -0.37
ACTN1-208ENST00000553370 BRPF1P55201 1214 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms