RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 COL25A1Q9BXS0 654 aaPredicted RBP7.96□□□□□ -1.14
SMARCC2-213ENST00000552627 C19orf44Q9H6X5 657 aa7.96□□□□□ -1.14
SMARCC2-213ENST00000552627 GPAMQ9HCL2 828 aa7.96□□□□□ -1.14
SMARCC2-213ENST00000552627 TRAK1Q9UPV9 953 aa7.96□□□□□ -1.14
SMARCC2-213ENST00000552627 DLC1Q96QB1 1528 aa7.96□□□□□ -1.14
SMARCC2-213ENST00000552627 CDC42BPGQ6DT37 1551 aa7.96□□□□□ -1.14
SMARCC2-213ENST00000552627 MST1RQ04912 1400 aa7.95□□□□□ -1.14
SMARCC2-213ENST00000552627 PHLPP1O60346 1717 aa7.95□□□□□ -1.14
SMARCC2-213ENST00000552627 FMN2Q9NZ56 1722 aa7.95□□□□□ -1.14
SMARCC2-213ENST00000552627 RGPD8O14715 1765 aaPredicted RBP7.95□□□□□ -1.14
SMARCC2-213ENST00000552627 MSX1P28360 303 aa7.95□□□□□ -1.14
SMARCC2-213ENST00000552627 PLA2G4AP47712 749 aa7.95□□□□□ -1.14
SMARCC2-213ENST00000552627 NBPF8Q3BBV2 869 aa7.95□□□□□ -1.14
SMARCC2-213ENST00000552627 LARP1Q6PKG0 1096 aaKnown RBP7.95□□□□□ -1.14
SMARCC2-213ENST00000552627 SIX5Q8N196 739 aa7.95□□□□□ -1.14
SMARCC2-213ENST00000552627 CNTNAP3BQ96NU0 1288 aa7.95□□□□□ -1.14
SMARCC2-213ENST00000552627 CNTNAP3Q9BZ76 1288 aa7.95□□□□□ -1.14
SMARCC2-213ENST00000552627 VRTNQ9H8Y1 702 aa7.95□□□□□ -1.14
SMARCC2-213ENST00000552627 SCHIP1Q9P0W5 487 aaPredicted RBP7.95□□□□□ -1.14
SMARCC2-213ENST00000552627 SLAIN2Q9P270 581 aa7.95□□□□□ -1.14
SMARCC2-213ENST00000552627 IQSEC3Q9UPP2 1182 aaPredicted RBP7.95□□□□□ -1.14
SMARCC2-213ENST00000552627 DCCP43146 1447 aa7.95□□□□□ -1.14
SMARCC2-213ENST00000552627 CSB-PGBD3P0DP91 1061 aa7.94□□□□□ -1.14
SMARCC2-213ENST00000552627 KRT76Q01546 638 aa7.94□□□□□ -1.14
SMARCC2-213ENST00000552627 TNS4Q8IZW8 715 aa7.94□□□□□ -1.14
SMARCC2-213ENST00000552627 PGBD3Q8N328 593 aa7.94□□□□□ -1.14
SMARCC2-213ENST00000552627 GTPBP3Q969Y2 492 aaKnown RBP7.94□□□□□ -1.14
SMARCC2-213ENST00000552627 AIDAQ96BJ3 306 aa7.94□□□□□ -1.14
SMARCC2-213ENST00000552627 NUCKS1Q9H1E3 243 aaKnown RBP7.94□□□□□ -1.14
SMARCC2-213ENST00000552627 CABP1Q9NZU7 370 aa7.94□□□□□ -1.14
SMARCC2-213ENST00000552627 QRICH2Q9H0J4 1663 aa7.94□□□□□ -1.14
SMARCC2-213ENST00000552627 FAM135BQ49AJ0 1406 aa7.94□□□□□ -1.14
SMARCC2-213ENST00000552627 USP32Q8NFA0 1604 aa7.93□□□□□ -1.14
SMARCC2-213ENST00000552627 EPHA4P54764 986 aa7.93□□□□□ -1.14
SMARCC2-213ENST00000552627 RNFT1Q5M7Z0 435 aa7.93□□□□□ -1.14
SMARCC2-213ENST00000552627 ZSCAN1Q8NBB4 408 aa7.93□□□□□ -1.14
SMARCC2-213ENST00000552627 DDX17Q92841 729 aaKnown RBP7.93□□□□□ -1.14
SMARCC2-213ENST00000552627 HIRIP3Q9BW71 556 aaPredicted RBP7.93□□□□□ -1.14
SMARCC2-213ENST00000552627 POGKQ9P215 609 aa7.93□□□□□ -1.14
SMARCC2-213ENST00000552627 USP3Q9Y6I4 520 aa7.93□□□□□ -1.14
SMARCC2-213ENST00000552627 ADGRB2O60241 1585 aa7.93□□□□□ -1.14
SMARCC2-213ENST00000552627 COL16A1Q07092 1604 aaPredicted RBP7.92□□□□□ -1.14
SMARCC2-213ENST00000552627 NHSL1Q5SYE7 1610 aa7.92□□□□□ -1.14
SMARCC2-213ENST00000552627 SFI1A8K8P3 1242 aa7.92□□□□□ -1.14
SMARCC2-213ENST00000552627 M0R2N6 131 aa7.92□□□□□ -1.14
SMARCC2-213ENST00000552627 DKK1O94907 266 aa7.92□□□□□ -1.14
SMARCC2-213ENST00000552627 FOXK2Q01167 660 aa7.92□□□□□ -1.14
SMARCC2-213ENST00000552627 BRINP3Q76B58 766 aa7.92□□□□□ -1.14
SMARCC2-213ENST00000552627 ZNF295-AS1Q8N0V1 137 aa7.92□□□□□ -1.14
SMARCC2-213ENST00000552627 C1orf216Q8TAB5 229 aa7.92□□□□□ -1.14
SMARCC2-213ENST00000552627 TRERF1Q96PN7 1200 aa7.92□□□□□ -1.14
SMARCC2-213ENST00000552627 RUBCNLQ9H714 662 aa7.92□□□□□ -1.14
SMARCC2-213ENST00000552627 ROCK2O75116 1388 aaKnown RBP7.92□□□□□ -1.14
SMARCC2-213ENST00000552627 C1orf167Q5SNV9 1468 aa7.92□□□□□ -1.14
SMARCC2-213ENST00000552627 RALGAPBQ86X10 1494 aa7.92□□□□□ -1.14
SMARCC2-213ENST00000552627 GPR25O00155 361 aa7.91□□□□□ -1.14
SMARCC2-213ENST00000552627 SEC13P55735 322 aa7.91□□□□□ -1.14
SMARCC2-213ENST00000552627 PTK7Q13308 1070 aa7.91□□□□□ -1.14
SMARCC2-213ENST00000552627 LBRQ14739 615 aaKnown RBP7.91□□□□□ -1.14
SMARCC2-213ENST00000552627 CRTC2Q53ET0 693 aaPredicted RBP7.91□□□□□ -1.14
SMARCC2-213ENST00000552627 EFHC2Q5JST6 749 aa7.91□□□□□ -1.14
SMARCC2-213ENST00000552627 SLC9A9Q8IVB4 645 aa7.91□□□□□ -1.14
SMARCC2-213ENST00000552627 ORAI2Q96SN7 254 aa7.91□□□□□ -1.14
SMARCC2-213ENST00000552627 AHDC1Q5TGY3 1603 aaPredicted RBP7.91□□□□□ -1.14
SMARCC2-213ENST00000552627 FAM196BA6NMK8 535 aa7.9□□□□□ -1.14
SMARCC2-213ENST00000552627 RFX1P22670 979 aa7.9□□□□□ -1.14
SMARCC2-213ENST00000552627 TEAD4Q15561 434 aa7.9□□□□□ -1.14
SMARCC2-213ENST00000552627 TBCELQ5QJ74 424 aa7.9□□□□□ -1.14
SMARCC2-213ENST00000552627 TSEN2Q8NCE0 465 aaKnown RBP7.9□□□□□ -1.14
SMARCC2-213ENST00000552627 STK17AQ9UEE5 414 aa7.9□□□□□ -1.14
SMARCC2-213ENST00000552627 PARP3Q9Y6F1 533 aa7.9□□□□□ -1.14
SMARCC2-213ENST00000552627 USP17L15C9J2P7 530 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 USP17L10C9JJH3 530 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 USP17L13C9JLJ4 530 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 USP17L12C9JPN9 530 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 USP17L11C9JVI0 530 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 USP17L21D6R901 530 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 USP17L18D6R9N7 530 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 USP17L22D6RA61 530 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 USP17L17D6RBQ6 530 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 USP17L19D6RCP7 530 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 USP17L20D6RJB6 530 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 THBS1P07996 1170 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 TATP17735 454 aaPredicted RBP7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 ATP4AP20648 1035 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 LORP23490 312 aaPredicted RBP7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 NOS2P35228 1153 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 ZEB1P37275 1124 aaPredicted RBP7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 XPCQ01831 940 aaPredicted RBP7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 USP17L24Q0WX57 530 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 DPYDQ12882 1025 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 GAS6Q14393 721 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 ARSJQ5FYB0 599 aaPredicted RBP7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 ANKMY2Q8IV38 441 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 TSPAN10Q9H1Z9 355 aaPredicted RBP7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 CRISPLD1Q9H336 500 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 ZDHHC3Q9NYG2 299 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 KIF1AQ12756 1690 aa7.89□□□□□ -1.15
SMARCC2-213ENST00000552627 TULP4Q9NRJ4 1543 aa7.88□□□□□ -1.15
SMARCC2-213ENST00000552627 GPRASP1Q5JY77 1395 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms